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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:246.0 nTPM
HPA Brain:238.3 nTPM
GTEx:246.0 nTPM
FANTOM5:224.1 Scaled Tags Per Million
Pig:135.1 nTPM
Mouse:57.9 nTPM
Allen mouse:1.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046847
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

238.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 238.3
2290 Female, age 72, unknown 420.0
2846 Female, age 79, unknown 334.4
1857 Female, age 85, left hemisphere 323.8
1781 Male, age 74, unknown 201.4
1854 Male, age 80, left hemisphere 190.7
2289 Male, age 61, right hemisphere 186.3
2288 Male, age 75, left hemisphere 139.5
2481 Female, age 94, left hemisphere 110.7
Globus pallidus, externus
nTPM: 12.8
2646 Male, age 61, right hemisphere 28.9
2395 Male, age 75, both hemispheres 16.3
2772 Female, age 79, unknown 8.5
2567 Female, age 72, unknown 8.4
1996 Male, age 80, right hemisphere 2.1
Globus pallidus, internus
nTPM: 11.0
2483 Female, age 94, right hemisphere 61.7
2566 Female, age 72, unknown 5.1
1818 Male, age 74, unknown 2.6
2287 Male, age 75, right hemisphere 2.2
2111 Female, age 85, right hemisphere 2.0
2037 Male, age 80, right hemisphere 1.8
2778 Female, age 91, both hemispheres 1.3
Nucleus accumbens
nTPM: 188.8
1783 Male, age 74, unknown 313.8
1806 Female, age 85, left hemisphere 294.0
1856 Female, age 91, right hemisphere 249.6
2824 Male, age 61, right hemisphere 224.5
2698 Female, age 72, unknown 182.1
2286 Male, age 75, left hemisphere 130.3
2391 Female, age 94, left hemisphere 69.4
2732 Male, age 80, right hemisphere 46.5
Nucleus basalis of Meynert
nTPM: 120.6
2484 Female, age 94, left hemisphere 191.8
2393 Male, age 80, right hemisphere 155.1
2821 Male, age 75, both hemispheres 82.6
2569 Male, age 61, both hemispheres 52.7
Nucleus of the diagonal band
nTPM: 29.6
1812 Female, age 91, both hemispheres 38.9
2029 Male, age 61, right hemisphere 30.2
2195 Female, age 85, both hemispheres 27.9
1979 Male, age 74, unknown 27.6
2775 Male, age 80, right hemisphere 23.3
Putamen
nTPM: 234.8
2466 Female, age 79, unknown 331.4
1829 Male, age 74, unknown 301.2
2489 Female, age 72, unknown 300.3
1838 Male, age 80, right hemisphere 232.8
1937 Female, age 91, right hemisphere 201.3
2482 Female, age 94, left hemisphere 139.1
2647 Male, age 75, left hemisphere 137.2
Septal nuclei
nTPM: 23.5
1960 Male, age 74, unknown 36.0
2059 Female, age 85, both hemispheres 26.5
2394 Male, age 61, left hemisphere 24.2
2031 Female, age 72, unknown 23.9
2009 Female, age 91, both hemispheres 23.2
2629 Female, age 94, right hemisphere 18.8
2199 Male, age 80, right hemisphere 11.7
Stria terminalis, bed nucleus
nTPM: 28.4
2486 Female, age 94, both hemispheres 55.1
1974 Female, age 91, both hemispheres 19.9
2201 Male, age 74, unknown 10.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 246.0
Samples: 246

Max nTPM: 751.6
Min nTPM: 1.4
Std nTPM: 182.0
Median nTPM: 222.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 751.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 751.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 733.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 706.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 704.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 664.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 614.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 610.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 589.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 586.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 580.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 564.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 553.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 545.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 535.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 526.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 521.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 520.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 515.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 514.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 498.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 498.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 497.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 485.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 484.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 484.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 475.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 474.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 470.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 470.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 465.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 463.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 461.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 460.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 458.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 458.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 455.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 449.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 445.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 439.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 431.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 431.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 429.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 428.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 427.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 426.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 421.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 420.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 418.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 414.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 412.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 408.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 407.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 407.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 406.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 405.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 405.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 404.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 402.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 402.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 401.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 401.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 395.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 391.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 389.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 383.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 377.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 375.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 373.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 370.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 368.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 365.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 360.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 359.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 354.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 353.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 350.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 349.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 345.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 342.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 340.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 340.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 337.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 326.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 326.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 325.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 322.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 319.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 319.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 317.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 316.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 314.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 312.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 312.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 309.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 296.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 294.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 285.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 285.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 280.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 279.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 275.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 273.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 269.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 267.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 266.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 266.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 265.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 265.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 263.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 262.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 262.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 258.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 252.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 250.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 250.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 243.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 242.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 233.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 233.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 230.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 225.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 223.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 221.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 220.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 219.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 214.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 212.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 207.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 200.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 196.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 193.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 186.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 183.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 181.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 177.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 173.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 172.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 171.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 171.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 170.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 168.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 168.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 160.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 160.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 159.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 158.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 154.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 153.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 151.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 149.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 146.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 146.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 145.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 145.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 142.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 141.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 140.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 140.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 138.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 135.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 133.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 132.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 129.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 125.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 125.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 109.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 106.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 106.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 101.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 97.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 95.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 94.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 94.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 94.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 93.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 80.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 80.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 72.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 70.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 69.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 65.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 60.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 58.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 54.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 52.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 51.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 49.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 48.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 45.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 44.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 43.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 42.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 41.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 40.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 39.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 38.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 38.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 38.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 36.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 35.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 34.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 32.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 31.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 31.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 26.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 26.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 21.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 19.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 17.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 17.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 16.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 16.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 13.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 8.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 203.8
Samples: 246

Max nTPM: 645.9
Min nTPM: 1.4
Std nTPM: 128.5
Median nTPM: 222.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 645.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 587.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 505.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 499.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 493.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 483.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 479.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 468.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 457.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 438.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 425.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 396.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 393.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 391.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 389.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 388.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 383.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 381.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 377.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 374.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 361.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 358.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 357.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 356.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 355.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 347.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 345.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 344.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 344.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 336.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 331.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 331.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 329.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 329.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 326.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 325.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 324.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 323.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 322.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 321.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 319.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 316.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 314.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 314.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 312.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 312.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 312.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 312.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 311.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 311.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 307.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 305.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 304.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 302.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 302.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 299.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 298.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 297.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 297.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 296.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 293.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 292.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 289.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 288.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 287.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 285.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 285.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 284.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 280.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 279.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 278.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 277.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 275.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 275.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 275.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 274.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 273.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 272.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 271.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 271.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 267.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 266.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 265.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 265.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 264.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 263.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 263.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 262.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 260.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 260.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 259.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 258.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 258.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 257.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 253.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 252.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 251.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 251.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 251.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 250.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 249.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 246.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 245.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 242.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 241.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 240.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 238.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 238.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 237.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 235.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 234.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 233.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 233.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 233.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 232.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 231.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 228.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 227.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 227.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 225.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 223.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 223.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 223.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 222.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 220.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 219.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 215.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 212.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 211.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 210.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 208.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 207.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 204.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 203.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 202.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 197.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 196.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 194.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 190.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 190.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 189.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 187.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 183.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 178.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 177.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 177.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 176.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 176.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 173.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 171.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 164.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 164.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 163.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 162.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 160.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 160.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 159.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 158.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 152.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 151.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 151.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 148.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 147.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 146.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 144.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 142.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 141.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 134.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 134.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 133.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 126.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 125.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 123.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 122.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 121.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 113.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 111.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 108.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 106.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 105.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 103.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 101.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 85.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 83.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 80.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 79.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 79.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 76.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 68.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 67.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 66.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 66.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 63.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 62.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 61.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 57.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 56.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 55.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 54.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 53.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 52.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 48.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 48.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 46.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 45.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 44.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 43.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 38.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 36.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 35.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 34.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 34.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 33.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 30.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 30.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 29.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 26.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 26.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 23.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 19.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 16.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 12.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 10.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 9.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 6.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 5.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 5.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 4.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 1.4
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Brain - Putamen (basal ganglia)
Average nTPM: 228.7
Samples: 205

Max nTPM: 845.4
Min nTPM: 7.1
Std nTPM: 181.7
Median nTPM: 193.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 845.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 799.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 699.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 663.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 621.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 602.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 602.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 583.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 581.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 562.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 556.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 542.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 520.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 519.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 518.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 515.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 513.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 507.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 506.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 503.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 499.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 488.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 485.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 479.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 478.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 471.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 466.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 461.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 457.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 450.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 447.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 425.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 420.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 415.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 404.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 403.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 403.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 403.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 403.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 397.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 387.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 387.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 386.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 376.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 376.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 371.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 370.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 368.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 365.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 363.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 362.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 361.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 354.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 351.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 349.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 347.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 346.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 345.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 342.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 338.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 332.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 326.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 322.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 321.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 315.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 315.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 308.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 308.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 301.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 296.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 296.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 289.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 282.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 281.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 280.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 279.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 276.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 269.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 268.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 268.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 260.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 250.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 245.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 239.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 232.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 231.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 226.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 226.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 221.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 217.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 216.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 216.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 216.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 215.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 213.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 213.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 211.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 205.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 204.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 201.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 199.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 196.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 193.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 191.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 191.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 185.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 183.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 180.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 178.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 177.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 174.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 171.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 171.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 169.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 165.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 163.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 156.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 149.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 142.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 138.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 137.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 135.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 133.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 133.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 127.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 125.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 120.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 114.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 110.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 105.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 103.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 102.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 98.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 97.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 96.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 95.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 95.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 90.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 90.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 87.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 87.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 86.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 85.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 83.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 82.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 82.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 81.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 80.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 79.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 73.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 73.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 72.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 69.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 66.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 65.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 58.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 56.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 55.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 52.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 48.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 48.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 46.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 46.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 45.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 44.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 43.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 41.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 38.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 35.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 33.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 32.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 30.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 29.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 27.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 27.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 26.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 25.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 24.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 24.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 22.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 22.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 21.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 20.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 20.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 19.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 19.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 16.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 15.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 14.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 13.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

224.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 92.9
FF:10164-103B2 76 years, female 92.9
Nucleus accumbens
Scaled Tags Per Million: 90.6
FF:10037-101F1 23-56 years, mixed 90.6
Putamen
Scaled Tags Per Million: 224.1
FF:10176-103C5 60 years, female 224.1
Globus pallidus
Scaled Tags Per Million: 28.3
FF:10175-103C4 60 years, female 48.6
FF:10161-103A8 76 years, female 8.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

135.1
Pig sample Sample description nTPM
Caudate
nTPM: 135.1
Samples: 4

Max nTPM: 168.5
Min nTPM: 100.1
Sample A Female 100.1
Sample B Female 145.8
Sample C Male 168.5
Sample D Male 126.0
Putamen
nTPM: 124.4
Samples: 4

Max nTPM: 180.1
Min nTPM: 38.7
Sample A Female 38.7
Sample B Female 131.9
Sample C Male 180.1
Sample D Male 146.8
Septum
nTPM: 29.8
Samples: 4

Max nTPM: 54.1
Min nTPM: 3.2
Sample A Female 54.1
Sample B Female 50.2
Sample C Male 3.2
Sample D Male 11.5
Ventral pallidum
nTPM: 58.4
Samples: 4

Max nTPM: 76.8
Min nTPM: 13.6
Sample A Female 76.1
Sample B Female 67.0
Sample C Male 13.6
Sample D Male 76.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 54.5
Samples: 4

Max nTPM: 65.4
Min nTPM: 35.8
Sample A Male 63.0
Sample B Male 65.4
Sample C Female 35.8
Sample D Female 53.6
Septum
nTPM: 18.6
Samples: 4

Max nTPM: 23.9
Min nTPM: 13.8
Sample A Male 23.9
Sample B Male 18.3
Sample C Female 18.5
Sample D Female 13.8
Ventral forebrain
nTPM: 57.9
Samples: 4

Max nTPM: 68.0
Min nTPM: 48.0
Sample A Male 68.0
Sample B Male 48.0
Sample C Female 59.8
Sample D Female 55.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.3
2529 Antisense, RP_040507_01_G07, Mouse strain C57BL/6J (56 days, male) 1.3
2530 Antisense, RP_040507_01_G07, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.5
2529 Antisense, RP_040507_01_G07, Mouse strain C57BL/6J (56 days, male) 0.5
2530 Antisense, RP_040507_01_G07, Mouse strain C57BL/6J (56 days, male) 0.1

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