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CXCL10
HPA
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  • CXCL10
PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CXCL10
Synonyms C7, crg-2, gIP-10, IFI10, INP10, IP-10, mob-1, SCYB10
Gene descriptioni

Full gene name according to HGNC.

C-X-C motif chemokine ligand 10
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q21.1
Chromosome location (bp) 76021118 - 76023497
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
Ensembl ENSG00000169245 (version 109)
Entrez gene 3627
HGNC HGNC:10637
UniProt P02778 (UniProt - Evidence at protein level)
neXtProt NX_P02778
GeneCards CXCL10
Antibodypedia CXCL10 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Pro-inflammatory cytokine that is involved in a wide variety of processes such as chemotaxis, differentiation, and activation of peripheral immune cells, regulation of cell growth, apoptosis and modulation of angiostatic effects 1, 2, 3. Plays thereby an important role during viral infections by stimulating the activation and migration of immune cells to the infected sites (By similarity). Mechanistically, binding of CXCL10 to the CXCR3 receptor activates G protein-mediated signaling and results in downstream activation of phospholipase C-dependent pathway, an increase in intracellular calcium production and actin reorganization 4, 5. In turn, recruitment of activated Th1 lymphocytes occurs at sites of inflammation 6, 7. Activation of the CXCL10/CXCR3 axis also plays an important role in neurons in response to brain injury for activating microglia, the resident macrophage population of the central nervous system, and directing them to the lesion site. This recruitment is an essential element for neuronal reorganization (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Cytokine
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Chemotaxis, Inflammatory response
Gene summary (Entrez)i

Useful information about the gene from Entrez

This antimicrobial gene encodes a chemokine of the CXC subfamily and ligand for the receptor CXCR3. Binding of this protein to CXCR3 results in pleiotropic effects, including stimulation of monocytes, natural killer and T-cell migration, and modulation of adhesion molecule expression. This gene may also be a key regulator of the 'cytokine storm' immune response to SARS-CoV-2 infection. [provided by RefSeq, Sep 2020]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CXCL10-201
ENSP00000305651
ENST00000306602
P02778
[Direct mapping] C-X-C motif chemokine 10 CXCL10(1-73)
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   TMHMM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Human disease related genes
   Immune system diseases
   Allergies and autoimmune diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002690 [positive regulation of leukocyte chemotaxis]
GO:0005102 [signaling receptor binding]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006935 [chemotaxis]
GO:0006952 [defense response]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0007166 [cell surface receptor signaling pathway]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007189 [adenylate cyclase-activating G protein-coupled receptor signaling pathway]
GO:0007267 [cell-cell signaling]
GO:0007517 [muscle organ development]
GO:0008009 [chemokine activity]
GO:0008015 [blood circulation]
GO:0008201 [heparin binding]
GO:0008284 [positive regulation of cell population proliferation]
GO:0008603 [cAMP-dependent protein kinase regulator activity]
GO:0009409 [response to cold]
GO:0009605 [response to external stimulus]
GO:0009615 [response to virus]
GO:0009617 [response to bacterium]
GO:0009897 [external side of plasma membrane]
GO:0010332 [response to gamma radiation]
GO:0010818 [T cell chemotaxis]
GO:0010819 [regulation of T cell chemotaxis]
GO:0010996 [response to auditory stimulus]
GO:0016525 [negative regulation of angiogenesis]
GO:0030335 [positive regulation of cell migration]
GO:0030593 [neutrophil chemotaxis]
GO:0032496 [response to lipopolysaccharide]
GO:0033280 [response to vitamin D]
GO:0034605 [cellular response to heat]
GO:0042056 [chemoattractant activity]
GO:0042118 [endothelial cell activation]
GO:0042127 [regulation of cell population proliferation]
GO:0042981 [regulation of apoptotic process]
GO:0045236 [CXCR chemokine receptor binding]
GO:0045662 [negative regulation of myoblast differentiation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0048248 [CXCR3 chemokine receptor binding]
GO:0050918 [positive chemotaxis]
GO:0051281 [positive regulation of release of sequestered calcium ion into cytosol]
GO:0051607 [defense response to virus]
GO:0061844 [antimicrobial humoral immune response mediated by antimicrobial peptide]
GO:0070098 [chemokine-mediated signaling pathway]
GO:0071222 [cellular response to lipopolysaccharide]
GO:0090026 [positive regulation of monocyte chemotaxis]
GO:0097398 [cellular response to interleukin-17]
GO:0098586 [cellular response to virus]
GO:0140374 [antiviral innate immune response]
GO:1901509 [regulation of endothelial tube morphogenesis]
GO:1901740 [negative regulation of myoblast fusion]
GO:2000406 [positive regulation of T cell migration]
Show all
98 aa
10.9 kDa
Yes 0

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