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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:49.7 nTPM
HPA Brain:115.4 nTPM
GTEx:49.7 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 103.5
2194 Female, age 79, both hemispheres 133.5
2816 Male, age 47, midline 123.4
2565 Male, age 75, midline 97.2
2048 Male, age 55, midline 95.4
1981 Female, age 72, midline 67.8
Cervical spinal cord, dorsal horn
nTPM: 86.8
2721 Male, age 90, both hemispheres 140.4
2297 Male, age 75, both hemispheres 110.4
1877 Male, age 55, unknown 90.3
2296 Male, age 66, both hemispheres 67.6
2069 Male, age 47, both hemispheres 61.0
2173 Female, age 72, unknown 51.3
Cervical spinal cord, ventral horn
nTPM: 115.4
2820 Female, age 79, both hemispheres 198.9
2068 Male, age 55, unknown 148.1
2809 Male, age 90, both hemispheres 96.7
2480 Male, age 75, both hemispheres 95.8
2295 Male, age 66, both hemispheres 90.5
2098 Female, age 72, unknown 62.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 49.7
Samples: 159

Max nTPM: 164.1
Min nTPM: 8.4
Std nTPM: 21.2
Median nTPM: 46.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 164.1
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 120.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 115.1
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 99.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 97.1
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 93.4
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 92.0
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 90.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 87.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 87.2
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 81.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 80.1
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 79.6
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 77.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 77.0
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 73.7
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 73.4
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 72.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 71.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 71.3
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 69.8
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 69.7
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 68.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 68.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 67.8
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 66.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 65.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 65.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 64.7
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 64.7
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 63.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 62.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 62.3
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 61.4
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 61.2
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 61.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 60.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 60.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 60.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 59.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 59.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 58.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 58.6
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 58.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 57.6
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 57.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 57.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 56.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 56.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 55.7
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 55.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 54.2
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 53.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 53.3
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 52.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 52.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 52.2
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 51.8
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 51.7
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 51.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 51.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 51.3
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 51.3
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 51.0
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 50.5
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 50.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 50.4
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 50.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 50.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 48.9
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 48.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 48.6
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 48.6
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 48.0
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 47.7
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 47.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 47.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 46.7
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 46.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 46.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 46.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 45.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 45.6
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 45.5
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 45.4
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 45.2
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 44.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 44.7
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 43.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 43.7
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 43.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 43.2
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 43.1
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 42.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 42.9
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 42.8
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 42.7
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 42.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 42.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 42.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 42.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 41.7
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 41.6
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 41.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 41.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 40.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 40.1
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 40.0
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 39.8
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 39.6
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 39.2
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 38.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 38.4
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 38.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 37.8
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 37.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 37.7
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 37.7
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 37.3
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 37.1
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 37.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 36.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 36.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 35.6
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 35.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 35.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 34.9
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 34.3
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 33.7
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 33.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 33.5
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 32.5
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 32.1
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 32.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 31.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 31.3
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 29.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 29.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 28.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 28.9
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 27.8
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 27.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 26.4
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 25.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 25.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 24.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 24.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 23.3
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 22.7
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 22.7
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 22.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 21.9
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 21.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 19.8
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 18.8
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 16.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 15.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 13.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 8.4
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