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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:54.4 nTPM
HPA Brain:56.5 nTPM
GTEx:54.4 nTPM
FANTOM5:72.6 Scaled Tags Per Million
Pig:45.5 nTPM
Mouse:59.2 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025123
Glial cells Medium
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 55.4
1857 Female, age 85, left hemisphere 80.0
2481 Female, age 94, left hemisphere 66.2
1854 Male, age 80, left hemisphere 59.7
2290 Female, age 72, unknown 56.3
2289 Male, age 61, right hemisphere 50.2
2288 Male, age 75, left hemisphere 49.9
2846 Female, age 79, unknown 43.7
1781 Male, age 74, unknown 37.2
Globus pallidus, externus
nTPM: 35.8
2646 Male, age 61, right hemisphere 57.8
1996 Male, age 80, right hemisphere 48.2
2772 Female, age 79, unknown 32.2
2395 Male, age 75, both hemispheres 27.7
2567 Female, age 72, unknown 13.1
Globus pallidus, internus
nTPM: 33.5
2483 Female, age 94, right hemisphere 57.9
2037 Male, age 80, right hemisphere 48.1
1818 Male, age 74, unknown 35.0
2287 Male, age 75, right hemisphere 31.1
2778 Female, age 91, both hemispheres 25.3
2566 Female, age 72, unknown 18.7
2111 Female, age 85, right hemisphere 18.0
Nucleus accumbens
nTPM: 56.5
1806 Female, age 85, left hemisphere 78.3
2824 Male, age 61, right hemisphere 62.8
1856 Female, age 91, right hemisphere 62.7
2698 Female, age 72, unknown 54.9
2286 Male, age 75, left hemisphere 50.9
2732 Male, age 80, right hemisphere 49.4
1783 Male, age 74, unknown 48.8
2391 Female, age 94, left hemisphere 44.1
Nucleus basalis of Meynert
nTPM: 43.8
2569 Male, age 61, both hemispheres 60.8
2393 Male, age 80, right hemisphere 45.1
2484 Female, age 94, left hemisphere 36.4
2821 Male, age 75, both hemispheres 33.0
Nucleus of the diagonal band
nTPM: 35.1
1979 Male, age 74, unknown 49.3
1812 Female, age 91, both hemispheres 36.4
2195 Female, age 85, both hemispheres 33.8
2775 Male, age 80, right hemisphere 31.8
2029 Male, age 61, right hemisphere 24.2
Putamen
nTPM: 41.8
2482 Female, age 94, left hemisphere 54.6
1838 Male, age 80, right hemisphere 54.3
1937 Female, age 91, right hemisphere 44.2
2466 Female, age 79, unknown 38.6
1829 Male, age 74, unknown 37.7
2489 Female, age 72, unknown 32.9
2647 Male, age 75, left hemisphere 30.4
Septal nuclei
nTPM: 38.6
2199 Male, age 80, right hemisphere 58.1
2059 Female, age 85, both hemispheres 47.9
2629 Female, age 94, right hemisphere 39.2
2009 Female, age 91, both hemispheres 34.8
2394 Male, age 61, left hemisphere 32.6
2031 Female, age 72, unknown 31.5
1960 Male, age 74, unknown 26.4
Stria terminalis, bed nucleus
nTPM: 34.2
2201 Male, age 74, unknown 41.6
2486 Female, age 94, both hemispheres 31.6
1974 Female, age 91, both hemispheres 29.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.4
Samples: 246

Max nTPM: 105.5
Min nTPM: 10.2
Std nTPM: 14.0
Median nTPM: 50.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 105.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 86.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 80.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 77.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 72.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 72.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 71.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 71.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 71.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 68.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 68.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 67.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 67.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 66.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 65.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 65.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 65.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 64.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 64.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 64.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 63.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 62.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 62.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 62.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 62.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 61.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 61.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 61.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 61.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 61.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 60.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 60.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 59.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 58.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 57.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 57.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 57.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 57.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 57.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 57.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 57.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 56.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 56.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 56.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 55.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 55.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 55.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 55.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 55.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 54.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 54.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 54.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 54.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 54.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 54.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 54.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 53.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 53.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 53.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 53.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 52.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 52.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 52.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 51.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 51.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 51.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 51.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 51.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 50.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 50.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 50.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 50.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 50.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 50.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 49.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 49.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 49.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 49.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 48.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 48.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 48.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 47.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 47.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 46.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 46.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 45.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 45.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 45.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 45.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 44.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 44.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 44.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 44.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 44.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 44.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 44.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 43.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 43.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 43.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 42.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 42.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 42.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 42.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 41.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 41.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 41.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 41.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 40.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 40.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 40.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 40.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 39.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 39.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 39.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 38.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 37.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 37.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 36.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 36.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 36.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 36.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 36.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 35.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 35.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 35.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 35.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 34.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 34.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 34.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 34.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 34.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 33.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 33.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 33.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 33.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 32.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 31.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 31.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 31.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 31.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 31.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 30.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 30.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 29.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 28.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 28.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 28.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 26.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 25.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 25.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 25.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 24.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 24.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 23.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 22.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 18.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 54.4
Samples: 246

Max nTPM: 99.6
Min nTPM: 13.4
Std nTPM: 17.9
Median nTPM: 54.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 99.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 98.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 97.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 96.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 95.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 95.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 94.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 94.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 93.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 90.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 88.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 88.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 86.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 85.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 83.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 82.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 81.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 81.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 80.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 80.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 80.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 77.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 76.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 76.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 76.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 76.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 76.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 76.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 76.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 75.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 75.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 74.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 74.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 73.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 73.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 72.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 72.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 72.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 71.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 71.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 71.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 71.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 71.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 70.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 68.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 68.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 68.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 67.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 66.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 66.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 66.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 66.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 66.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 65.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 65.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 65.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 64.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 64.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 64.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 64.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 63.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 63.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 63.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 63.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 63.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 63.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 62.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 62.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 62.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 62.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 61.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 61.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 61.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 60.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 59.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 59.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 59.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 59.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 59.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 58.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 58.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 58.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 58.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 58.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 57.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 57.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 57.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 57.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 57.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 57.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 57.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 56.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 56.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 56.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 55.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 55.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 55.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 54.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 54.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 54.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 54.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 54.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 54.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 54.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 53.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 53.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 53.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 53.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 52.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 52.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 52.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 51.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 51.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 51.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 51.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 51.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 51.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 51.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 51.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 51.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 50.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 50.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 49.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 48.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 48.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 48.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 48.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 48.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 48.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 47.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 47.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 47.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 47.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 46.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 46.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 46.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 46.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 46.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 46.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 46.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 46.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 46.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 46.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 45.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 44.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 44.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 44.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 44.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 43.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 43.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 43.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 43.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 42.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 42.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 42.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 42.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 42.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 42.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 41.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 41.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 40.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 40.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 40.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 39.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 39.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 39.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 39.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 38.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 38.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 38.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 38.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 36.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 35.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 35.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 35.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 34.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 34.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 34.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 33.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 33.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 33.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 33.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 32.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 32.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 32.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 31.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 31.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 31.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 31.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 30.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 29.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 29.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 29.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 28.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 28.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 28.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 28.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 27.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 27.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 26.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 26.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 25.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 24.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 24.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 21.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 21.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 20.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 19.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 19.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 18.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 15.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 14.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 13.4
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Brain - Putamen (basal ganglia)
Average nTPM: 42.1
Samples: 205

Max nTPM: 90.8
Min nTPM: 11.8
Std nTPM: 12.8
Median nTPM: 40.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 84.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 80.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 74.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 70.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 69.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 66.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 63.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 63.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 62.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 61.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 60.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 59.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 59.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 59.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 58.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 58.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 58.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 57.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 57.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 57.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 56.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 56.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 55.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 55.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 55.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 55.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 54.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 54.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 54.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 54.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 53.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 52.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 52.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 52.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 52.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 52.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 51.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 51.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 51.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 50.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 50.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 50.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 50.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 49.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 49.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 48.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 48.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 48.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 47.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 47.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 47.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 47.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 47.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 47.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 47.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 47.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 46.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 46.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 46.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 46.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 46.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 46.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 44.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 44.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 44.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 43.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 43.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 43.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 43.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 42.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 42.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 42.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 41.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 41.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 41.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 40.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 40.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 40.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 40.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 40.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 40.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 40.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 40.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 39.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 39.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 39.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 39.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 39.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 38.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 38.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 38.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 38.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 38.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 38.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 38.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 37.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 37.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 37.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 37.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 36.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 36.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 36.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 36.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 36.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 36.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 36.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 35.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 35.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 35.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 35.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 35.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 34.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 34.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 34.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 34.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 33.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 33.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 33.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 32.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 32.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 32.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 32.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 31.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 31.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 31.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 30.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 30.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 30.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 30.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 29.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 29.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 29.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 28.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 28.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 28.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 28.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 27.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 27.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 27.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 26.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 25.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 25.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 25.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 24.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 24.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 23.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 23.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 22.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 22.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 22.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 22.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 21.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 20.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 20.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 19.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 18.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 12.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 11.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

72.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.6
FF:10164-103B2 76 years, female 72.6
Nucleus accumbens
Scaled Tags Per Million: 52.0
FF:10037-101F1 23-56 years, mixed 52.0
Putamen
Scaled Tags Per Million: 71.6
FF:10176-103C5 60 years, female 71.6
Globus pallidus
Scaled Tags Per Million: 41.5
FF:10175-103C4 60 years, female 43.1
FF:10161-103A8 76 years, female 40.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.5
Pig sample Sample description nTPM
Caudate
nTPM: 45.2
Samples: 4

Max nTPM: 49.3
Min nTPM: 40.9
Sample A Female 44.4
Sample B Female 49.3
Sample C Male 46.2
Sample D Male 40.9
Putamen
nTPM: 30.8
Samples: 4

Max nTPM: 35.7
Min nTPM: 26.1
Sample A Female 27.8
Sample B Female 26.1
Sample C Male 35.7
Sample D Male 33.5
Septum
nTPM: 45.5
Samples: 4

Max nTPM: 53.0
Min nTPM: 41.5
Sample A Female 53.0
Sample B Female 43.7
Sample C Male 41.5
Sample D Male 43.7
Ventral pallidum
nTPM: 38.8
Samples: 4

Max nTPM: 50.2
Min nTPM: 32.2
Sample A Female 50.2
Sample B Female 36.2
Sample C Male 32.2
Sample D Male 36.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 47.1
Samples: 4

Max nTPM: 51.5
Min nTPM: 43.4
Sample A Male 51.5
Sample B Male 45.8
Sample C Female 43.4
Sample D Female 47.5
Septum
nTPM: 59.2
Samples: 4

Max nTPM: 63.3
Min nTPM: 57.3
Sample A Male 57.3
Sample B Male 63.3
Sample C Female 58.0
Sample D Female 58.0
Ventral forebrain
nTPM: 54.5
Samples: 4

Max nTPM: 62.4
Min nTPM: 46.8
Sample A Male 46.8
Sample B Male 62.4
Sample C Female 61.3
Sample D Female 47.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.9
72080155 Antisense, RP_051017_03_C11, Mouse strain C57BL/6J (56 days, male) 1.3
69012849 Antisense, RP_050309_01_F03, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 0.9
72080155 Antisense, RP_051017_03_C11, Mouse strain C57BL/6J (56 days, male) 1.0
69012849 Antisense, RP_050309_01_F03, Mouse strain C57BL/6J (56 days, male) 0.7

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