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GJB1
HPA
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  • GJB1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GJB1
Synonyms CMTX, CMTX1, CX32
Gene descriptioni

Full gene name according to HGNC.

Gap junction protein beta 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q13.1
Chromosome location (bp) 71212811 - 71225516
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000169562 (version 109)
Entrez gene 2705
HGNC HGNC:4283
UniProt P08034 (UniProt - Evidence at protein level)
neXtProt NX_P08034
GeneCards GJB1
Antibodypedia GJB1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the gap junction protein family. The gap junction proteins are membrane-spanning proteins that assemble to form gap junction channels that facilitate the transfer of ions and small molecules between cells. According to sequence similarities at the nucleotide and amino acid levels, the gap junction proteins are divided into two categories, alpha and beta. Mutations in this gene cause X-linked Charcot-Marie-Tooth disease, an inherited peripheral neuropathy. Alternatively spliced transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Oct 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GJB1-201
ENSP00000354900
ENST00000361726
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0015868 [purine ribonucleotide transport]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0016328 [lateral plasma membrane]
GO:0032991 [protein-containing complex]
GO:0042802 [identical protein binding]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
GO:1905867 [epididymis development]
Show all
283 aa
32 kDa
No 4
GJB1-202
ENSP00000363141
ENST00000374029
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-203
ENSP00000407223
ENST00000447581
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
C9JWU8
[Direct mapping] Gap junction beta-1 protein
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-204
ENSP00000494142
ENST00000645009
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A2R8YD01
[Direct mapping] Gap junction beta-1 protein
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-205
ENSP00000494596
ENST00000646835
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-206
ENSP00000495960
ENST00000647424
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-207
ENSP00000502766
ENST00000674549
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-208
ENSP00000502556
ENST00000674844
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-209
ENSP00000501813
ENST00000675209
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-210
ENSP00000501757
ENST00000675368
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4
GJB1-211
ENSP00000501571
ENST00000675609
P08034
[Direct mapping] Gap junction beta-1 protein
Show all
A0A654ICJ7
[Target identity:100%; Query identity:100%] Gap junction protein
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0005243 [gap junction channel activity]
GO:0005515 [protein binding]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0005921 [gap junction]
GO:0005922 [connexin complex]
GO:0007154 [cell communication]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0016020 [membrane]
GO:0016264 [gap junction assembly]
GO:0055085 [transmembrane transport]
GO:0070161 [anchoring junction]
Show all
283 aa
32 kDa
No 4

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