We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PCBP1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PCBP1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:142.4 nTPM
HPA Brain:159.2 nTPM
GTEx:142.4 nTPM
FANTOM5:325.2 Scaled Tags Per Million
Pig:174.4 nTPM
Mouse:123.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB037113
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

159.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 149.8
2481 Female, age 94, left hemisphere 214.6
2288 Male, age 75, left hemisphere 155.0
2289 Male, age 61, right hemisphere 153.3
2846 Female, age 79, unknown 143.1
2290 Female, age 72, unknown 141.8
1781 Male, age 74, unknown 136.8
1857 Female, age 85, left hemisphere 128.9
1854 Male, age 80, left hemisphere 124.6
Globus pallidus, externus
nTPM: 157.9
2772 Female, age 79, unknown 197.7
1996 Male, age 80, right hemisphere 178.0
2646 Male, age 61, right hemisphere 158.1
2395 Male, age 75, both hemispheres 151.8
2567 Female, age 72, unknown 103.7
Globus pallidus, internus
nTPM: 159.2
2483 Female, age 94, right hemisphere 187.9
2287 Male, age 75, right hemisphere 187.4
2778 Female, age 91, both hemispheres 166.7
1818 Male, age 74, unknown 153.5
2037 Male, age 80, right hemisphere 150.2
2111 Female, age 85, right hemisphere 140.7
2566 Female, age 72, unknown 127.7
Nucleus accumbens
nTPM: 143.2
2391 Female, age 94, left hemisphere 190.7
2286 Male, age 75, left hemisphere 158.5
2698 Female, age 72, unknown 149.4
1806 Female, age 85, left hemisphere 139.1
1783 Male, age 74, unknown 136.7
1856 Female, age 91, right hemisphere 134.8
2732 Male, age 80, right hemisphere 128.3
2824 Male, age 61, right hemisphere 108.1
Nucleus basalis of Meynert
nTPM: 142.7
2569 Male, age 61, both hemispheres 161.4
2821 Male, age 75, both hemispheres 153.7
2484 Female, age 94, left hemisphere 143.4
2393 Male, age 80, right hemisphere 112.3
Nucleus of the diagonal band
nTPM: 125.7
1812 Female, age 91, both hemispheres 154.0
2195 Female, age 85, both hemispheres 131.6
2775 Male, age 80, right hemisphere 127.0
1979 Male, age 74, unknown 121.2
2029 Male, age 61, right hemisphere 94.7
Putamen
nTPM: 129.8
2482 Female, age 94, left hemisphere 178.9
1829 Male, age 74, unknown 138.1
2466 Female, age 79, unknown 134.9
1937 Female, age 91, right hemisphere 131.7
1838 Male, age 80, right hemisphere 112.0
2647 Male, age 75, left hemisphere 107.5
2489 Female, age 72, unknown 105.2
Septal nuclei
nTPM: 130.2
2031 Female, age 72, unknown 163.2
1960 Male, age 74, unknown 140.0
2009 Female, age 91, both hemispheres 131.8
2629 Female, age 94, right hemisphere 127.5
2059 Female, age 85, both hemispheres 120.9
2199 Male, age 80, right hemisphere 117.0
2394 Male, age 61, left hemisphere 111.4
Stria terminalis, bed nucleus
nTPM: 112.8
1974 Female, age 91, both hemispheres 131.7
2201 Male, age 74, unknown 108.6
2486 Female, age 94, both hemispheres 98.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

142.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.8
Samples: 246

Max nTPM: 346.0
Min nTPM: 92.7
Std nTPM: 26.3
Median nTPM: 133.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 346.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 234.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 226.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 221.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 215.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 208.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 207.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 205.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 202.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 201.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 197.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 195.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 195.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 184.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 176.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 174.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 173.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 172.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 171.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 170.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 170.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 168.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 166.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 164.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 164.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 163.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 163.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 162.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 161.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 160.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 160.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 159.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 158.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 158.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 158.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 157.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 156.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 156.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 156.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 156.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 156.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 154.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 154.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 153.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 153.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 153.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 151.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 151.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 151.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 151.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 150.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 149.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 149.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 148.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 148.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 148.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 147.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 147.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 147.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 147.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 146.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 146.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 146.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 145.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 145.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 145.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 145.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 144.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 144.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 144.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 144.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 144.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 143.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 143.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 143.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 142.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 142.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 142.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 142.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 142.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 141.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 141.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 141.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 141.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 140.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 140.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 140.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 140.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 139.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 139.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 139.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 138.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 138.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 138.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 137.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 137.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 136.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 136.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 136.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 136.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 136.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 136.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 136.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 136.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 135.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 135.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 135.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 135.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 135.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 135.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 134.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 134.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 134.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 134.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 133.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 133.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 133.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 133.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 132.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 132.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 132.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 132.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 132.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 132.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 131.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 131.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 131.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 131.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 131.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 131.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 131.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 131.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 131.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 131.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 130.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 130.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 130.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 129.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 129.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 129.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 128.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 128.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 128.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 128.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 128.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 128.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 128.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 128.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 128.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 128.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 127.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 127.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 127.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 127.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 127.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 126.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 126.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 126.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 126.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 126.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 125.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 125.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 125.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 125.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 124.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 124.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 123.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 123.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 123.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 123.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 123.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 122.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 122.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 122.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 122.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 122.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 122.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 122.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 122.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 121.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 121.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 121.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 121.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 121.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 120.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 120.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 120.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 120.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 120.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 120.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 120.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 120.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 119.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 119.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 119.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 119.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 118.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 118.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 118.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 117.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 117.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 117.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 117.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 117.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 116.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 116.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 116.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 116.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 116.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 115.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 115.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 115.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 115.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 112.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 110.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 110.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 110.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 108.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 108.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 106.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 105.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 102.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 97.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 92.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 131.2
Samples: 246

Max nTPM: 307.5
Min nTPM: 82.4
Std nTPM: 24.4
Median nTPM: 126.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 307.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 239.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 236.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 221.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 195.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 188.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 187.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 185.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 182.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 179.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 175.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 173.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 169.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 168.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 166.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 166.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 162.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 161.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 160.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 158.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 158.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 157.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 156.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 156.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 156.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 155.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 154.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 154.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 154.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 153.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 153.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 153.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 152.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 151.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 150.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 148.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 148.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 148.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 147.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 147.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 147.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 147.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 146.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 146.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 146.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 146.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 144.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 144.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 144.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 144.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 143.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 143.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 142.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 141.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 141.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 140.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 140.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 139.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 139.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 139.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 138.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 138.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 138.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 138.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 138.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 138.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 137.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 137.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 137.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 137.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 137.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 136.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 136.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 136.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 136.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 136.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 136.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 136.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 135.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 135.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 134.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 134.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 134.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 134.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 133.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 133.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 133.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 133.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 132.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 132.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 132.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 131.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 130.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 130.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 130.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 130.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 130.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 130.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 130.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 130.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 130.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 130.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 129.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 129.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 129.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 129.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 129.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 128.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 128.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 128.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 128.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 128.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 128.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 128.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 128.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 128.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 127.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 127.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 127.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 127.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 127.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 127.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 126.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 126.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 126.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 126.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 126.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 125.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 125.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 125.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 125.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 125.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 125.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 125.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 125.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 125.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 124.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 124.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 124.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 124.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 124.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 124.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 124.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 124.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 124.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 123.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 123.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 123.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 123.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 123.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 123.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 122.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 122.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 122.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 122.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 121.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 121.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 121.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 121.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 121.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 121.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 120.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 120.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 120.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 120.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 120.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 120.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 119.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 119.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 119.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 119.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 119.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 119.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 119.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 119.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 118.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 118.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 118.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 118.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 117.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 117.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 117.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 117.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 117.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 117.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 117.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 117.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 116.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 116.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 116.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 116.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 116.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 116.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 115.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 115.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 115.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 115.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 115.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 114.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 114.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 114.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 114.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 114.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 114.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 114.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 113.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 113.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 113.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 113.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 113.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 112.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 112.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 112.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 111.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 111.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 111.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 110.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 110.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 110.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 109.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 109.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 109.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 109.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 108.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 107.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 105.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 105.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 104.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 102.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 101.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 101.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 101.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 101.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 100.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 98.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 97.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 97.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 97.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 95.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 95.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 93.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 92.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 92.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 82.4
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 142.4
Samples: 205

Max nTPM: 261.9
Min nTPM: 96.8
Std nTPM: 22.8
Median nTPM: 139.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 261.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 222.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 220.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 205.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 204.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 201.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 200.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 185.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 183.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 182.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 181.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 179.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 177.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 177.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 176.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 176.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 175.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 175.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 174.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 173.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 173.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 172.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 170.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 168.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 168.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 168.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 166.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 165.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 164.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 164.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 163.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 163.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 162.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 161.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 161.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 160.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 160.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 160.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 159.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 157.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 156.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 155.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 154.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 154.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 153.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 153.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 153.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 153.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 152.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 152.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 152.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 151.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 150.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 150.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 149.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 149.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 148.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 148.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 147.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 147.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 147.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 146.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 146.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 146.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 145.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 145.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 145.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 145.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 145.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 145.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 144.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 144.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 144.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 144.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 144.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 143.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 143.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 143.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 142.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 142.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 142.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 142.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 142.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 141.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 141.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 141.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 141.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 141.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 141.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 141.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 141.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 141.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 141.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 140.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 140.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 140.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 140.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 140.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 139.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 139.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 139.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 139.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 139.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 139.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 138.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 138.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 138.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 138.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 138.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 137.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 137.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 137.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 137.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 137.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 136.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 136.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 136.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 135.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 135.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 135.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 134.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 134.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 134.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 134.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 133.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 133.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 133.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 133.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 133.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 132.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 132.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 132.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 132.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 131.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 131.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 131.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 131.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 131.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 130.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 130.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 130.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 130.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 130.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 130.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 129.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 129.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 129.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 129.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 129.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 129.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 128.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 128.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 128.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 128.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 128.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 128.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 128.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 128.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 127.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 127.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 127.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 126.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 126.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 126.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 126.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 125.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 125.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 125.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 125.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 124.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 123.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 122.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 122.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 122.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 122.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 122.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 121.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 121.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 121.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 121.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 121.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 120.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 120.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 118.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 118.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 118.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 117.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 116.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 116.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 116.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 114.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 114.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 113.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 110.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 109.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 109.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 106.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 101.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 100.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 99.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 98.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 96.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

325.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 279.2
FF:10164-103B2 76 years, female 279.2
Nucleus accumbens
Scaled Tags Per Million: 186.0
FF:10037-101F1 23-56 years, mixed 186.0
Putamen
Scaled Tags Per Million: 244.2
FF:10176-103C5 60 years, female 244.2
Globus pallidus
Scaled Tags Per Million: 325.2
FF:10175-103C4 60 years, female 327.2
FF:10161-103A8 76 years, female 323.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.4
Pig sample Sample description nTPM
Caudate
nTPM: 154.5
Samples: 4

Max nTPM: 174.9
Min nTPM: 139.4
Sample A Female 149.0
Sample B Female 154.7
Sample C Male 174.9
Sample D Male 139.4
Putamen
nTPM: 174.4
Samples: 4

Max nTPM: 219.4
Min nTPM: 130.8
Sample A Female 178.6
Sample B Female 130.8
Sample C Male 219.4
Sample D Male 168.8
Septum
nTPM: 158.4
Samples: 4

Max nTPM: 178.7
Min nTPM: 137.0
Sample A Female 178.7
Sample B Female 137.0
Sample C Male 161.9
Sample D Male 155.9
Ventral pallidum
nTPM: 157.3
Samples: 4

Max nTPM: 169.1
Min nTPM: 139.2
Sample A Female 139.2
Sample B Female 169.1
Sample C Male 159.8
Sample D Male 161.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 108.9
Samples: 4

Max nTPM: 117.1
Min nTPM: 102.3
Sample A Male 111.1
Sample B Male 117.1
Sample C Female 104.9
Sample D Female 102.3
Septum
nTPM: 123.2
Samples: 4

Max nTPM: 133.9
Min nTPM: 112.5
Sample A Male 117.8
Sample B Male 128.5
Sample C Female 133.9
Sample D Female 112.5
Ventral forebrain
nTPM: 111.5
Samples: 4

Max nTPM: 134.7
Min nTPM: 102.1
Sample A Male 106.2
Sample B Male 102.1
Sample C Female 134.7
Sample D Female 103.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org