We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DCXR
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • DCXR
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:115.1 nTPM
HPA Brain:76.4 nTPM
GTEx:115.1 nTPM
FANTOM5:93.9 Scaled Tags Per Million
Pig:29.8 nTPM
Mouse:16.6 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA023371Antibody HPA023863
Glial cells Not detectedNot detected
Neuronal cells HighNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 67.8
2481 Female, age 94, left hemisphere 89.3
2290 Female, age 72, unknown 78.7
1781 Male, age 74, unknown 68.4
1857 Female, age 85, left hemisphere 63.7
2288 Male, age 75, left hemisphere 63.0
2846 Female, age 79, unknown 62.9
2289 Male, age 61, right hemisphere 58.6
1854 Male, age 80, left hemisphere 57.7
Globus pallidus, externus
nTPM: 76.4
1996 Male, age 80, right hemisphere 100.0
2772 Female, age 79, unknown 90.3
2646 Male, age 61, right hemisphere 76.1
2395 Male, age 75, both hemispheres 62.1
2567 Female, age 72, unknown 53.5
Globus pallidus, internus
nTPM: 76.2
2483 Female, age 94, right hemisphere 98.6
2287 Male, age 75, right hemisphere 91.3
2778 Female, age 91, both hemispheres 83.1
2037 Male, age 80, right hemisphere 74.9
1818 Male, age 74, unknown 72.0
2111 Female, age 85, right hemisphere 61.4
2566 Female, age 72, unknown 52.3
Nucleus accumbens
nTPM: 54.2
1806 Female, age 85, left hemisphere 70.4
2286 Male, age 75, left hemisphere 69.9
2732 Male, age 80, right hemisphere 58.0
1783 Male, age 74, unknown 54.8
2698 Female, age 72, unknown 54.7
2391 Female, age 94, left hemisphere 44.7
1856 Female, age 91, right hemisphere 42.7
2824 Male, age 61, right hemisphere 38.7
Nucleus basalis of Meynert
nTPM: 54.8
2569 Male, age 61, both hemispheres 72.1
2484 Female, age 94, left hemisphere 60.9
2393 Male, age 80, right hemisphere 45.1
2821 Male, age 75, both hemispheres 41.1
Nucleus of the diagonal band
nTPM: 47.1
1979 Male, age 74, unknown 57.8
2775 Male, age 80, right hemisphere 46.7
1812 Female, age 91, both hemispheres 44.4
2029 Male, age 61, right hemisphere 44.3
2195 Female, age 85, both hemispheres 42.2
Putamen
nTPM: 57.6
2482 Female, age 94, left hemisphere 69.9
2466 Female, age 79, unknown 68.0
2489 Female, age 72, unknown 60.4
1937 Female, age 91, right hemisphere 54.4
1838 Male, age 80, right hemisphere 53.4
2647 Male, age 75, left hemisphere 51.0
1829 Male, age 74, unknown 46.3
Septal nuclei
nTPM: 53.3
2059 Female, age 85, both hemispheres 60.2
2394 Male, age 61, left hemisphere 59.7
1960 Male, age 74, unknown 59.0
2031 Female, age 72, unknown 56.7
2199 Male, age 80, right hemisphere 55.7
2629 Female, age 94, right hemisphere 41.9
2009 Female, age 91, both hemispheres 40.1
Stria terminalis, bed nucleus
nTPM: 47.2
2201 Male, age 74, unknown 51.6
2486 Female, age 94, both hemispheres 45.2
1974 Female, age 91, both hemispheres 44.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 100.6
Samples: 246

Max nTPM: 370.4
Min nTPM: 27.2
Std nTPM: 40.6
Median nTPM: 94.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 370.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 291.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 219.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 197.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 197.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 189.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 183.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 179.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 177.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 176.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 175.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 169.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 167.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 166.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 166.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 160.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 160.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 159.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 158.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 156.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 154.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 153.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 153.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 148.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 147.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 147.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 146.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 146.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 146.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 144.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 144.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 144.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 143.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 137.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 134.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 134.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 133.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 132.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 132.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 132.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 132.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 130.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 129.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 128.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 126.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 126.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 126.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 126.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 125.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 124.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 124.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 123.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 122.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 121.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 120.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 120.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 120.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 120.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 119.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 119.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 118.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 117.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 116.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 116.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 115.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 114.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 114.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 114.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 114.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 113.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 112.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 112.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 111.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 111.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 109.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 109.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 109.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 109.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 109.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 108.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 108.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 108.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 107.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 106.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 105.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 105.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 105.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 104.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 104.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 104.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 103.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 103.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 102.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 101.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 101.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 101.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 100.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 100.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 100.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 99.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 99.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 99.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 98.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 97.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 97.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 97.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 96.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 95.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 95.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 95.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 94.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 94.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 92.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 92.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 92.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 91.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 91.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 91.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 90.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 90.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 89.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 88.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 87.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 86.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 86.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 86.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 85.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 84.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 84.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 83.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 83.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 82.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 82.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 82.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 81.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 80.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 79.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 79.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 79.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 79.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 78.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 78.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 78.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 78.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 77.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 77.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 76.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 76.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 75.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 75.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 75.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 74.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 74.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 73.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 73.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 73.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 73.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 72.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 71.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 71.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 71.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 70.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 70.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 69.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 69.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 69.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 67.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 67.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 66.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 66.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 66.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 65.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 65.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 64.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 63.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 63.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 63.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 62.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 60.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 60.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 59.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 59.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 59.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 58.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 58.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 55.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 53.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 51.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 46.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 36.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 27.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 27.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 97.2
Samples: 246

Max nTPM: 380.6
Min nTPM: 35.8
Std nTPM: 45.1
Median nTPM: 86.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 380.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 291.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 285.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 257.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 236.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 209.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 205.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 194.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 193.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 190.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 188.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 188.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 187.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 183.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 174.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 168.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 167.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 167.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 162.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 162.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 157.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 157.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 156.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 153.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 152.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 150.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 148.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 148.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 142.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 142.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 137.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 136.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 136.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 135.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 133.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 132.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 132.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 131.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 128.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 128.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 127.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 127.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 126.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 126.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 124.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 123.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 122.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 122.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 120.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 120.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 119.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 119.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 116.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 116.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 115.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 113.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 113.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 113.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 113.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 113.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 113.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 113.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 112.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 111.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 111.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 110.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 109.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 109.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 108.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 107.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 107.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 107.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 107.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 106.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 106.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 105.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 105.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 105.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 103.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 102.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 101.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 101.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 101.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 101.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 101.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 100.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 100.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 99.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 99.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 99.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 99.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 98.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 97.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 97.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 97.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 96.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 96.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 96.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 95.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 93.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 93.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 93.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 93.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 92.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 92.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 92.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 91.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 91.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 90.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 90.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 90.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 90.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 90.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 90.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 89.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 89.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 88.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 88.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 88.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 87.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 86.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 86.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 86.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 86.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 85.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 85.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 84.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 84.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 84.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 84.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 84.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 83.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 83.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 83.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 83.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 82.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 82.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 82.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 82.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 82.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 82.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 82.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 81.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 81.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 81.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 80.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 80.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 80.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 80.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 79.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 79.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 79.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 79.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 78.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 78.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 77.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 77.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 77.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 75.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 75.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 74.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 74.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 74.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 74.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 73.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 73.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 72.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 71.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 71.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 70.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 70.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 70.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 69.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 69.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 69.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 69.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 69.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 69.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 68.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 68.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 68.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 67.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 66.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 66.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 66.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 66.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 65.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 65.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 64.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 64.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 64.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 64.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 63.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 63.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 63.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 62.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 62.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 62.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 62.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 60.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 60.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 59.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 59.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 58.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 57.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 55.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 55.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 55.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 55.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 55.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 54.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 54.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 54.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 54.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 53.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 53.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 53.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 51.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 51.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 51.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 50.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 50.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 50.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 49.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 48.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 48.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 48.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 47.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 46.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 41.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 39.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 115.1
Samples: 205

Max nTPM: 269.8
Min nTPM: 40.4
Std nTPM: 44.6
Median nTPM: 106.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 269.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 261.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 260.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 250.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 244.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 238.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 237.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 235.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 222.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 221.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 214.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 206.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 205.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 182.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 179.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 178.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 177.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 175.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 174.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 174.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 173.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 170.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 168.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 162.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 162.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 162.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 161.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 158.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 157.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 155.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 155.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 153.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 152.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 151.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 151.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 150.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 150.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 149.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 147.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 145.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 145.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 145.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 145.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 144.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 143.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 143.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 143.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 142.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 141.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 140.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 139.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 136.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 135.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 135.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 134.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 132.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 132.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 131.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 130.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 129.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 129.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 128.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 126.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 126.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 126.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 126.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 125.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 123.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 123.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 122.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 121.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 120.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 120.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 120.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 120.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 120.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 118.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 117.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 117.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 116.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 115.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 114.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 114.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 114.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 112.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 111.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 111.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 111.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 111.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 111.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 111.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 110.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 110.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 110.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 109.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 109.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 108.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 108.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 107.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 107.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 107.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 106.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 106.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 106.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 105.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 104.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 104.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 104.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 103.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 103.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 102.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 101.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 99.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 99.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 99.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 99.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 98.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 97.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 97.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 97.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 97.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 97.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 96.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 96.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 96.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 95.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 95.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 95.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 94.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 94.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 94.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 94.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 92.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 91.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 91.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 91.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 91.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 90.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 90.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 88.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 88.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 87.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 87.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 87.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 86.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 85.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 85.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 84.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 84.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 83.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 83.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 81.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 81.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 81.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 81.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 80.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 78.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 78.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 77.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 76.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 76.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 76.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 75.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 74.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 73.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 73.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 72.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 72.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 72.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 71.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 70.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 70.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 68.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 67.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 67.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 67.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 66.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 65.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 65.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 65.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 63.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 62.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 62.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 62.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 61.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 61.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 60.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 60.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 59.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 58.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 55.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 55.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 55.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 53.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 40.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

93.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.0
FF:10164-103B2 76 years, female 81.0
Nucleus accumbens
Scaled Tags Per Million: 93.9
FF:10037-101F1 23-56 years, mixed 93.9
Putamen
Scaled Tags Per Million: 81.1
FF:10176-103C5 60 years, female 81.1
Globus pallidus
Scaled Tags Per Million: 71.4
FF:10161-103A8 76 years, female 88.8
FF:10175-103C4 60 years, female 54.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.8
Pig sample Sample description nTPM
Caudate
nTPM: 26.4
Samples: 4

Max nTPM: 33.7
Min nTPM: 21.2
Sample A Female 21.2
Sample B Female 33.7
Sample C Male 29.5
Sample D Male 21.2
Putamen
nTPM: 28.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 22.7
Sample A Female 29.2
Sample B Female 22.7
Sample C Male 30.6
Sample D Male 29.8
Septum
nTPM: 29.9
Samples: 4

Max nTPM: 33.1
Min nTPM: 25.0
Sample A Female 25.0
Sample B Female 29.7
Sample C Male 33.1
Sample D Male 31.6
Ventral pallidum
nTPM: 25.8
Samples: 4

Max nTPM: 32.9
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 32.9
Sample C Male 30.5
Sample D Male 22.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 13.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.1
Sample A Male 13.8
Sample B Male 13.8
Sample C Female 12.1
Sample D Female 12.7
Septum
nTPM: 16.6
Samples: 4

Max nTPM: 17.9
Min nTPM: 15.1
Sample A Male 15.1
Sample B Male 17.9
Sample C Female 17.4
Sample D Female 15.9
Ventral forebrain
nTPM: 13.5
Samples: 4

Max nTPM: 19.8
Min nTPM: 9.4
Sample A Male 13.4
Sample B Male 9.4
Sample C Female 19.8
Sample D Female 11.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
68301993 Antisense, RP_041130_02_B12, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.3
68301993 Antisense, RP_041130_02_B12, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org