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WNT10B
HPA
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  • WNT10B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WNT10B
Synonyms SHFM6, WNT-12
Gene descriptioni

Full gene name according to HGNC.

Wnt family member 10B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q13.12
Chromosome location (bp) 48965340 - 48971735
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000169884 (version 109)
Entrez gene 7480
HGNC HGNC:12775
UniProt O00744 (UniProt - Evidence at protein level)
neXtProt NX_O00744
GeneCards WNT10B
Antibodypedia WNT10B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Member of the Wnt ligand gene family that encodes for secreted proteins, which activate the Wnt signaling cascade. Specifically activates canonical Wnt/beta-catenin signaling and thus triggers beta-catenin/LEF/TCF-mediated transcriptional programs. Involved in signaling networks controlling stemness, pluripotency and cell fate decisions. Acts in the immune system, mammary gland, adipose tissue, bone and skin.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Wnt signaling pathway
Gene summary (Entrez)i

Useful information about the gene from Entrez

The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulation of cell fate and patterning during embryogenesis. This gene is a member of the WNT gene family. It may be involved in breast cancer, and its protein signaling is likely a molecular switch that governs adipogenesis. This protein is 96% identical to the mouse Wnt10b protein at the amino acid level. This gene is clustered with another family member, WNT1, in the chromosome 12q13 region. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WNT10B-201
ENSP00000301061
ENST00000301061
O00744
[Direct mapping] Protein Wnt-10b
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   Digestive system diseases
   Mouth and dental diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000086 [G2/M transition of mitotic cell cycle]
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001649 [osteoblast differentiation]
GO:0002062 [chondrocyte differentiation]
GO:0005102 [signaling receptor binding]
GO:0005109 [frizzled binding]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006357 [regulation of transcription by RNA polymerase II]
GO:0006366 [transcription by RNA polymerase II]
GO:0006629 [lipid metabolic process]
GO:0007224 [smoothened signaling pathway]
GO:0007275 [multicellular organism development]
GO:0008283 [cell population proliferation]
GO:0010971 [positive regulation of G2/M transition of mitotic cell cycle]
GO:0014835 [myoblast differentiation involved in skeletal muscle regeneration]
GO:0016055 [Wnt signaling pathway]
GO:0030182 [neuron differentiation]
GO:0030217 [T cell differentiation]
GO:0030501 [positive regulation of bone mineralization]
GO:0030855 [epithelial cell differentiation]
GO:0030858 [positive regulation of epithelial cell differentiation]
GO:0032434 [regulation of proteasomal ubiquitin-dependent protein catabolic process]
GO:0043065 [positive regulation of apoptotic process]
GO:0043403 [skeletal muscle tissue regeneration]
GO:0045165 [cell fate commitment]
GO:0045444 [fat cell differentiation]
GO:0045582 [positive regulation of T cell differentiation]
GO:0045598 [regulation of fat cell differentiation]
GO:0045599 [negative regulation of fat cell differentiation]
GO:0045669 [positive regulation of osteoblast differentiation]
GO:0045778 [positive regulation of ossification]
GO:0045899 [positive regulation of RNA polymerase II transcription preinitiation complex assembly]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0048018 [receptor ligand activity]
GO:0048627 [myoblast development]
GO:0048641 [regulation of skeletal muscle tissue development]
GO:0048741 [skeletal muscle fiber development]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0050821 [protein stabilization]
GO:0050909 [sensory perception of taste]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0051246 [regulation of protein metabolic process]
GO:0051726 [regulation of cell cycle]
GO:0051885 [positive regulation of timing of anagen]
GO:0060070 [canonical Wnt signaling pathway]
GO:0060346 [bone trabecula formation]
GO:0061196 [fungiform papilla development]
GO:0071300 [cellular response to retinoic acid]
GO:0071310 [cellular response to organic substance]
GO:0071320 [cellular response to cAMP]
GO:0071374 [cellular response to parathyroid hormone stimulus]
GO:0071407 [cellular response to organic cyclic compound]
GO:0071425 [hematopoietic stem cell proliferation]
GO:0090263 [positive regulation of canonical Wnt signaling pathway]
GO:0120163 [negative regulation of cold-induced thermogenesis]
GO:1902035 [positive regulation of hematopoietic stem cell proliferation]
Show all
389 aa
43 kDa
Yes 0
WNT10B-202
ENSP00000385980
ENST00000403957
B5MCC8
[Direct mapping] Protein Wnt
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   Digestive system diseases
   Mouth and dental diseases
Show all
GO:0005102 [signaling receptor binding]
GO:0005576 [extracellular region]
GO:0007275 [multicellular organism development]
GO:0016055 [Wnt signaling pathway]
Show all
173 aa
18.4 kDa
Yes 0
WNT10B-203
ENSP00000384691
ENST00000407467
O00744
[Direct mapping] Protein Wnt-10b
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   Digestive system diseases
   Mouth and dental diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002062 [chondrocyte differentiation]
GO:0005102 [signaling receptor binding]
GO:0005109 [frizzled binding]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007275 [multicellular organism development]
GO:0016055 [Wnt signaling pathway]
GO:0030182 [neuron differentiation]
GO:0043065 [positive regulation of apoptotic process]
GO:0045165 [cell fate commitment]
GO:0045599 [negative regulation of fat cell differentiation]
GO:0048018 [receptor ligand activity]
GO:0050821 [protein stabilization]
GO:0060070 [canonical Wnt signaling pathway]
GO:0071300 [cellular response to retinoic acid]
GO:0071425 [hematopoietic stem cell proliferation]
GO:0120163 [negative regulation of cold-induced thermogenesis]
Show all
191 aa
20.5 kDa
Yes 0
WNT10B-204
ENSP00000398473
ENST00000413630
C9J3H3
[Direct mapping] Protein Wnt
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   Digestive system diseases
   Mouth and dental diseases
Show all
GO:0005102 [signaling receptor binding]
GO:0005576 [extracellular region]
GO:0007275 [multicellular organism development]
GO:0016055 [Wnt signaling pathway]
Show all
132 aa
14.1 kDa
Yes 0
WNT10B-205
ENSP00000404896
ENST00000420388
C9JCI2
[Direct mapping] Protein Wnt
Show all
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Human disease related genes
   Congenital malformations
   Congenital malformations of the musculoskeletal system
   Digestive system diseases
   Mouth and dental diseases
Show all
GO:0005102 [signaling receptor binding]
GO:0005576 [extracellular region]
GO:0007275 [multicellular organism development]
GO:0016055 [Wnt signaling pathway]
Show all
102 aa
10.9 kDa
Yes 0

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