HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:36.3 nTPM
HPA Brain:56.1 nTPM
GTEx:36.3 nTPM
FANTOM5:128.7 Scaled Tags Per Million
Pig:64.2 nTPM
Mouse:79.9 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010926Antibody CAB002148
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.1
Sample id Sample description nTPM
Hippocampus
nTPM: 41.9
1911 Female, age 85, right hemisphere 49.6
1898 Male, age 80, left hemisphere 48.1
2529 Female, age 94, left hemisphere 43.8
2621 Female, age 67, right hemisphere 42.2
1855 Male, age 76, left hemisphere 35.1
2148 Female, age 91, left hemisphere 32.5
Dentate gyrus
nTPM: 38.7
2530 Female, age 94, left hemisphere 50.0
2528 Male, age 74, both hemispheres 43.5
2246 Female, age 85, both hemispheres 38.5
2010 Male, age 76, both hemispheres 36.0
1927 Female, age 91, both hemispheres 35.0
2531 Female, age 67, both hemispheres 29.1
Entorhinal gyrus
nTPM: 54.2
2117 Female, age 91, right hemisphere 63.1
1938 Female, age 85, left hemisphere 62.9
2613 Female, age 94, left hemisphere 61.1
1787 Male, age 76, left hemisphere 55.3
2764 Male, age 80, right hemisphere 49.0
2686 Male, age 75, right hemisphere 34.0
Hippocampus, CA1
nTPM: 36.4
2527 Male, age 74, both hemispheres 46.4
2082 Female, age 91, right hemisphere 36.4
1873 Female, age 85, both hemispheres 36.3
2045 Male, age 76, both hemispheres 33.8
2749 Male, age 80, left hemisphere 29.1
Hippocampus, CA2
nTPM: 46.6
1940 Female, age 85, left hemisphere 56.5
2249 Male, age 74, both hemispheres 55.1
2437 Female, age 94, left hemisphere 46.3
1963 Male, age 80, left hemisphere 42.0
2113 Female, age 91, right hemisphere 39.9
1892 Male, age 76, both hemispheres 39.7
Hippocampus, CA3
nTPM: 36.1
1891 Female, age 85, both hemispheres 61.3
1867 Male, age 76, both hemispheres 48.6
2436 Male, age 74, both hemispheres 41.4
2137 Male, age 80, left hemisphere 25.7
2620 Female, age 94, left hemisphere 21.2
2861 Female, age 67, both hemispheres 18.2
Parahippocampal cortex
nTPM: 45.1
1990 Female, age 91, right hemisphere 58.0
2692 Male, age 74, both hemispheres 50.8
2250 Female, age 67, right hemisphere 50.6
1933 Female, age 85, both hemispheres 50.1
1850 Male, age 80, both hemispheres 48.9
2532 Female, age 72, left hemisphere 44.1
2018 Male, age 76, both hemispheres 42.8
2693 Female, age 94, both hemispheres 40.9
2245 Female, age 91, both hemispheres 38.9
2622 Female, age 67, right hemisphere 25.9
Perirhinal gyrus
nTPM: 45.1
1847 Female, age 91, left hemisphere 50.1
2848 Male, age 76, right hemisphere 46.4
2521 Female, age 94, right hemisphere 46.0
1794 Male, age 80, right hemisphere 42.8
1841 Female, age 85, right hemisphere 40.2
Subiculum
nTPM: 56.1
1901 Male, age 80, both hemispheres 63.7
2042 Male, age 76, both hemispheres 63.5
1977 Female, age 85, both hemispheres 62.2
2438 Female, age 94, left hemisphere 61.6
2619 Male, age 74, both hemispheres 46.4
2729 Female, age 91, right hemisphere 39.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.3
Samples: 197

Max nTPM: 88.2
Min nTPM: 14.0
Std nTPM: 13.8
Median nTPM: 32.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 88.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 81.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 75.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 72.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 71.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 68.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 67.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 67.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 67.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 66.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 65.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 128.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.7
FF:10153-102I9 76 years, female 167.2
FF:10169-103B7 60 years, female 90.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 64.2
Pig sample Sample description nTPM
Subiculum
nTPM: 64.2
Samples: 4

Max nTPM: 74.5
Min nTPM: 52.9
Sample A Female 70.7
Sample B Female 58.8
Sample C Male 52.9
Sample D Male 74.5
Dorsal hippocampus
nTPM: 44.2
Samples: 4

Max nTPM: 54.0
Min nTPM: 29.9
Sample A Female 54.0
Sample B Female 45.0
Sample C Male 47.8
Sample D Male 29.9
Entorhinal cortex
nTPM: 53.4
Samples: 4

Max nTPM: 67.7
Min nTPM: 42.1
Sample A Female 67.7
Sample B Female 58.0
Sample C Male 42.1
Sample D Male 45.8
Ventral hippocampus
nTPM: 49.4
Samples: 4

Max nTPM: 69.4
Min nTPM: 38.6
Sample A Female 46.9
Sample B Female 42.6
Sample C Male 38.6
Sample D Male 69.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 79.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.9
Samples: 4

Max nTPM: 99.5
Min nTPM: 67.6
Sample A Male 67.6
Sample B Male 78.3
Sample C Female 74.3
Sample D Female 99.5
Hippocampal formation
nTPM: 47.1
Samples: 4

Max nTPM: 53.3
Min nTPM: 39.7
Sample A Male 50.5
Sample B Male 53.3
Sample C Female 39.7
Sample D Female 44.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
130155 Antisense, RP_040407_01_F11, Mouse strain C57BL/6J (56 days, male) 11.6
70928271 Antisense, RP_050725_02_C06, Mouse strain C57BL/6J (56 days, male) 7.8

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