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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:128.5 nTPM
HPA Brain:119.9 nTPM
GTEx:128.5 nTPM
FANTOM5:2.7 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

119.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 102.7
2565 Male, age 75, midline 115.4
2816 Male, age 47, midline 111.8
2194 Female, age 79, both hemispheres 102.5
2048 Male, age 55, midline 96.1
1981 Female, age 72, midline 87.7
Cervical spinal cord, dorsal horn
nTPM: 101.0
1877 Male, age 55, unknown 112.1
2297 Male, age 75, both hemispheres 109.0
2296 Male, age 66, both hemispheres 100.0
2069 Male, age 47, both hemispheres 98.6
2173 Female, age 72, unknown 97.6
2721 Male, age 90, both hemispheres 89.0
Cervical spinal cord, ventral horn
nTPM: 119.9
2809 Male, age 90, both hemispheres 145.6
2480 Male, age 75, both hemispheres 136.5
2820 Female, age 79, both hemispheres 127.6
2068 Male, age 55, unknown 108.6
2295 Male, age 66, both hemispheres 107.6
2098 Female, age 72, unknown 93.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.5
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 128.5
Samples: 159

Max nTPM: 188.4
Min nTPM: 76.8
Std nTPM: 20.9
Median nTPM: 127.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 188.4
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 187.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 186.3
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 184.3
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 180.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 179.2
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 172.0
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 166.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 165.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 165.9
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 160.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 160.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 158.7
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 157.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 156.3
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 156.2
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 155.0
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 154.2
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 153.5
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 153.1
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 151.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 151.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 150.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 149.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 149.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 148.9
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 146.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 146.3
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 144.5
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 144.5
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 144.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 143.4
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 142.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 142.3
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 142.1
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 142.0
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 141.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 141.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 141.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 140.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 139.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 139.4
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 138.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 138.1
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 138.1
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 138.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 137.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 137.2
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 135.9
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 135.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 135.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 134.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 134.3
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 134.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 133.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 133.2
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 133.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 132.8
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 132.6
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 132.3
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 132.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 132.0
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 132.0
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 131.2
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 131.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 130.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 130.2
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 130.1
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 129.6
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 129.4
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 129.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 129.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 129.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 128.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 128.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 128.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 128.0
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 127.5
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 127.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 127.1
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 126.8
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 126.3
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 126.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 125.6
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 125.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 124.1
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 124.0
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 123.6
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 123.0
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 122.6
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 122.6
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 122.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 122.4
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 122.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 121.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 121.8
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 121.4
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 121.4
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 121.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 121.1
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 120.9
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 120.9
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 120.9
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 120.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 120.7
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 120.5
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 119.5
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 119.2
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 118.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 118.8
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 118.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 118.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 118.1
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 117.9
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 117.8
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 117.7
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 117.7
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 117.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 117.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 117.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 116.9
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 115.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 114.9
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 114.5
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 113.5
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 113.0
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 112.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 111.4
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 111.2
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 109.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 109.6
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 109.4
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 108.8
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 108.2
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 106.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 106.3
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 106.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 106.1
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 105.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 104.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 104.1
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 102.6
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 101.5
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 101.5
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 101.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 100.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 100.1
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 100.0
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 99.9
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 99.4
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 98.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 96.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 95.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 94.1
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 92.6
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 91.6
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 90.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 86.4
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 76.8
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 2.7
FF:10181-103D1 60 years, female 3.0
FF:10159-103A6 76 years, female 2.5

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