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CHRNB1
HPA
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  • CHRNB1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CHRNB1
Synonyms CHRNB
Gene descriptioni

Full gene name according to HGNC.

Cholinergic receptor nicotinic beta 1 subunit
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband p13.1
Chromosome location (bp) 7445061 - 7457710
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000170175 (version 109)
Entrez gene 1140
HGNC HGNC:1961
UniProt P11230 (UniProt - Evidence at protein level)
neXtProt NX_P11230
GeneCards CHRNB1
Antibodypedia CHRNB1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Ligand-gated ion channel, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

The muscle acetylcholine receptor is composed of five subunits: two alpha subunits and one beta, one gamma, and one delta subunit. This gene encodes the beta subunit of the acetylcholine receptor. The acetylcholine receptor changes conformation upon acetylcholine binding leading to the opening of an ion-conducting channel across the plasma membrane. Mutations in this gene are associated with slow-channel congenital myasthenic syndrome. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CHRNB1-201
ENSP00000304290
ENST00000306071
P11230
[Direct mapping] Acetylcholine receptor subunit beta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0001941 [postsynaptic membrane organization]
GO:0003009 [skeletal muscle contraction]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005892 [acetylcholine-gated channel complex]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006936 [muscle contraction]
GO:0007165 [signal transduction]
GO:0007268 [chemical synaptic transmission]
GO:0007271 [synaptic transmission, cholinergic]
GO:0007274 [neuromuscular synaptic transmission]
GO:0015267 [channel activity]
GO:0015276 [ligand-gated ion channel activity]
GO:0015464 [acetylcholine receptor activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0030594 [neurotransmitter receptor activity]
GO:0031594 [neuromuscular junction]
GO:0034220 [ion transmembrane transport]
GO:0035095 [behavioral response to nicotine]
GO:0042166 [acetylcholine binding]
GO:0042391 [regulation of membrane potential]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050877 [nervous system process]
GO:0055001 [muscle cell development]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0099634 [postsynaptic specialization membrane]
GO:0110165 [cellular anatomical entity]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
Show all
501 aa
56.7 kDa
Yes 4
CHRNB1-202
ENSP00000439209
ENST00000536404
P11230
[Direct mapping] Acetylcholine receptor subunit beta
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0001941 [postsynaptic membrane organization]
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005231 [excitatory extracellular ligand-gated ion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005892 [acetylcholine-gated channel complex]
GO:0006811 [ion transport]
GO:0006812 [cation transport]
GO:0006936 [muscle contraction]
GO:0007165 [signal transduction]
GO:0007268 [chemical synaptic transmission]
GO:0007271 [synaptic transmission, cholinergic]
GO:0007274 [neuromuscular synaptic transmission]
GO:0015267 [channel activity]
GO:0015276 [ligand-gated ion channel activity]
GO:0015464 [acetylcholine receptor activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0030594 [neurotransmitter receptor activity]
GO:0031594 [neuromuscular junction]
GO:0034220 [ion transmembrane transport]
GO:0035095 [behavioral response to nicotine]
GO:0042166 [acetylcholine binding]
GO:0042391 [regulation of membrane potential]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050877 [nervous system process]
GO:0055001 [muscle cell development]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0110165 [cellular anatomical entity]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
Show all
429 aa
49.1 kDa
No 4
CHRNB1-203
ENSP00000460648
ENST00000570557
I3L3Q9
[Direct mapping] Acetylcholine receptor subunit beta
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0097060 [synaptic membrane]
GO:0110165 [cellular anatomical entity]
Show all
316 aa
35.7 kDa
No 2
CHRNB1-204
ENSP00000461402
ENST00000572857
I3L4N5
[Direct mapping] Acetylcholine receptor subunit beta
Show all
   SCAMPI predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0097060 [synaptic membrane]
Show all
158 aa
16.8 kDa
Yes 0
CHRNB1-207
ENSP00000461751
ENST00000575379
I3L535
[Direct mapping] Acetylcholine receptor subunit beta
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
37 aa
4.3 kDa
No 1
CHRNB1-208
ENSP00000459092
ENST00000576360
I3L1T7
[Direct mapping] Acetylcholine receptor subunit beta
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Other nervous and sensory system diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004888 [transmembrane signaling receptor activity]
GO:0005216 [ion channel activity]
GO:0005230 [extracellular ligand-gated ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0022848 [acetylcholine-gated cation-selective channel activity]
GO:0034220 [ion transmembrane transport]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0060078 [regulation of postsynaptic membrane potential]
GO:0060079 [excitatory postsynaptic potential]
GO:0097060 [synaptic membrane]
GO:0110165 [cellular anatomical entity]
Show all
380 aa
43.7 kDa
No 2

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