PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		31.662
Mouse brain, Intensity
Ponsi 		17.172
RNA expressioni
HPA Brain:99.5 nTPM
FANTOM5:123.0 Scaled Tags Per Million
Pig:24.9 nTPM
Mouse:20.8 nTPM
Allen mouse:2.7 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA015770
Medulla oblongata mean intensity 31.662
intensityi
FRONT BACK
Nucleus of the solitary tract 4.791
Raphe magnus nucleus 0.448
Cochlear nucleus 16.704
Lateral paragigantocellular nucleus 4.767
Raphe pallidus nucleus 8.013
Facial nucleus 7.542
Hypoglossal nucleus 2.047
Ambiguus nucleus 26.541
External cuneate nucleus 5.530
Inferior olivary nucleus 1.371
Raphe obscures nucleus 2.715
Dorsal motor nucleus of vagus 31.662
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 4.444
Parabrachial nucleus 1.355
Principle sensory trigeminal nucleus 2.639
Locus coeruleus 17.172
Pontine nucleus 13.366
Vestibular nucleus 0.284
Pontine reticular nucleus, oral 0.089
Lateral lemniscus 3.014
Superior paraolivary nucleus 3.783

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 99.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 56.6
1984 Male, age 76, both hemispheres 68.8
2301 Female, age 85, both hemispheres 56.4
2090 Male, age 80, both hemispheres 55.5
2188 Female, age 91, both hemispheres 45.7
Area postrema
nTPM: 91.9
2799 Male, age 61, both hemispheres 105.6
2054 Male, age 76, both hemispheres 87.0
2306 Male, age 80, both hemispheres 83.1
Dorsal cochlear nucleus
nTPM: 61.3
2058 Male, age 76, both hemispheres 67.8
2370 Male, age 61, both hemispheres 66.2
2802 Male, age 74, right hemisphere 63.5
2378 Male, age 80, both hemispheres 56.3
2187 Female, age 91, both hemispheres 52.7
Dorsal medullary reticular nucleus
nTPM: 66.4
2373 Male, age 61, both hemispheres 69.3
2088 Male, age 76, both hemispheres 65.0
2040 Female, age 85, both hemispheres 64.7
Dorsal motor vagal complex
nTPM: 86.9
2797 Male, age 61, both hemispheres 110.4
2813 Female, age 72, unknown 105.9
2643 Male, age 74, both hemispheres 100.8
2844 Male, age 55, unknown 95.2
2000 Male, age 74, unknown 89.7
2185 Male, age 76, both hemispheres 72.2
2133 Female, age 91, both hemispheres 64.5
2807 Female, age 85, both hemispheres 56.5
Dorsal tegmental nucleus
nTPM: 60.5
1936 Male, age 76, left hemisphere 66.6
2326 Male, age 74, both hemispheres 62.6
2083 Male, age 80, both hemispheres 61.2
2358 Male, age 61, both hemispheres 51.5
Dorsolateral tegmental area
nTPM: 67.8
2360 Male, age 74, both hemispheres 102.0
2141 Male, age 76, both hemispheres 72.0
2654 Male, age 80, both hemispheres 59.0
2337 Male, age 61, both hemispheres 53.2
2751 Female, age 85, both hemispheres 53.0
Gigantocellular reticular nuclei, medullary
nTPM: 62.7
2314 Male, age 61, both hemispheres 79.2
2462 Male, age 74, both hemispheres 76.4
1876 Female, age 85, both hemispheres 64.2
2022 Male, age 76, right hemisphere 62.7
2387 Female, age 91, both hemispheres 47.1
2310 Male, age 80, both hemispheres 46.9
Gigantocellular reticular nuclei, pars
nTPM: 62.2
2084 Female, age 85, both hemispheres 70.5
2168 Male, age 76, both hemispheres 69.6
2336 Male, age 61, both hemispheres 64.1
2706 Male, age 80, both hemispheres 55.3
2330 Male, age 80, both hemispheres 51.5
Inferior olive
nTPM: 99.5
2563 Male, age 74, both hemispheres 139.5
2085 Female, age 85, both hemispheres 112.9
2178 Male, age 61, both hemispheres 91.0
2628 Female, age 91, both hemispheres 77.3
2379 Male, age 80, both hemispheres 76.9
Kolliker-Fuse nucleus
nTPM: 65.5
2315 Male, age 76, right hemisphere 99.3
2163 Male, age 80, both hemispheres 55.0
2793 Female, age 91, left hemisphere 42.1
Lateral lemniscal nuclei
nTPM: 53.7
2169 Male, age 76, both hemispheres 63.9
2746 Female, age 85, left hemisphere 59.0
2036 Male, age 80, both hemispheres 54.1
2453 Male, age 74, right hemisphere 47.9
2320 Female, age 91, left hemisphere 43.8
Lateral medullary reticular nucleus
nTPM: 78.8
2804 Female, age 91, both hemispheres 93.4
2305 Male, age 74, both hemispheres 93.3
2374 Male, age 61, both hemispheres 81.6
2852 Male, age 80, both hemispheres 73.9
2190 Female, age 85, both hemispheres 71.3
2044 Male, age 76, both hemispheres 58.9
Lateral parabrachial nucleus
nTPM: 68.2
2139 Female, age 85, right hemisphere 91.6
2792 Male, age 76, both hemispheres 69.5
2013 Male, age 80, both hemispheres 59.8
2790 Male, age 61, both hemispheres 51.9
Lateral vestibular nucleus
nTPM: 63.3
2184 Male, age 76, both hemispheres 64.3
2311 Male, age 80, both hemispheres 62.4
Locus coeruleus
nTPM: 72.6
2123 Female, age 91, both hemispheres 81.4
2788 Male, age 74, unknown 80.4
2317 Female, age 72, unknown 79.6
2014 Male, age 55, unknown 77.2
1980 Male, age 76, both hemispheres 75.1
2162 Male, age 80, both hemispheres 61.7
2720 Male, age 74, both hemispheres 52.6
Medial olivary nucleus
nTPM: 71.2
2138 Female, age 91, both hemispheres 103.3
1943 Male, age 61, both hemispheres 67.4
2851 Male, age 80, both hemispheres 60.9
1962 Male, age 76, both hemispheres 53.3
Medial parabrachial nucleus
nTPM: 56.7
2786 Male, age 76, both hemispheres 65.8
2156 Male, age 61, both hemispheres 59.1
2170 Female, age 91, both hemispheres 55.2
2854 Male, age 80, both hemispheres 53.2
2463 Female, age 85, right hemisphere 50.3
Medial periolivary nuclei
nTPM: 58.5
2791 Male, age 74, right hemisphere 78.2
2063 Male, age 76, both hemispheres 63.9
2171 Female, age 85, both hemispheres 62.7
2458 Female, age 91, both hemispheres 44.5
2081 Male, age 80, both hemispheres 43.3
Medial vestibular nucleus
nTPM: 66.6
2743 Female, age 85, both hemispheres 85.5
2134 Male, age 76, both hemispheres 72.8
2801 Male, age 74, both hemispheres 69.6
2093 Male, age 80, both hemispheres 61.5
2624 Male, age 61, both hemispheres 60.4
2803 Female, age 91, both hemispheres 49.6
Motor facial nucleus
nTPM: 56.5
2062 Male, age 76, both hemispheres 68.2
2795 Female, age 91, both hemispheres 60.8
2365 Male, age 74, right hemisphere 60.5
2126 Male, age 61, both hemispheres 53.9
2327 Male, age 80, both hemispheres 51.7
2697 Female, age 85, both hemispheres 44.2
Motor hypoglossal nucleus
nTPM: 65.0
2277 Male, age 76, both hemispheres 88.5
2461 Male, age 61, both hemispheres 71.0
2125 Female, age 91, both hemispheres 64.1
2182 Male, age 80, both hemispheres 50.7
2132 Female, age 85, both hemispheres 50.4
Motor trigeminal nucleus
nTPM: 53.4
2309 Male, age 76, both hemispheres 66.7
2335 Male, age 61, both hemispheres 55.8
2079 Male, age 80, both hemispheres 53.1
2560 Male, age 74, both hemispheres 48.5
2321 Female, age 91, both hemispheres 43.1
Nuclei of the trapezoid body
nTPM: 59.0
2735 Female, age 85, both hemispheres 69.1
1983 Male, age 76, both hemispheres 65.8
2368 Female, age 91, both hemispheres 54.9
2159 Male, age 61, both hemispheres 53.9
2166 Male, age 80, both hemispheres 51.1
Nucleus ambiguus
nTPM: 71.2
2071 Male, age 76, both hemispheres 80.8
2096 Female, age 85, both hemispheres 61.5
Nucleus cuneatus
nTPM: 69.7
2564 Male, age 74, both hemispheres 92.5
2100 Male, age 76, both hemispheres 82.6
2562 Male, age 61, both hemispheres 78.2
2131 Male, age 76, both hemispheres 77.9
2380 Male, age 80, both hemispheres 70.0
2805 Female, age 91, both hemispheres 61.6
2376 Male, age 61, both hemispheres 60.8
2808 Female, age 85, both hemispheres 55.0
2381 Male, age 80, both hemispheres 48.9
Nucleus gracilis
nTPM: 74.6
2627 Male, age 74, both hemispheres 119.1
2299 Female, age 85, both hemispheres 59.1
2382 Male, age 80, both hemispheres 45.4
Nucleus raphe magnus
nTPM: 55.5
2455 Male, age 74, both hemispheres 72.1
2160 Male, age 61, both hemispheres 57.8
2172 Female, age 85, both hemispheres 54.9
2328 Male, age 80, both hemispheres 54.7
2051 Male, age 76, both hemispheres 52.4
2459 Female, age 91, both hemispheres 40.9
Nucleus raphe obscurus
nTPM: 66.1
2142 Male, age 76, midline 72.3
2800 Male, age 61, midline 64.3
2845 Female, age 85, midline 61.8
Nucleus raphe pallidus
nTPM: 57.3
2145 Male, age 76, midline 60.7
2183 Male, age 80, midline 55.9
1924 Male, age 61, midline 55.2
Nucleus tractus solitarii
nTPM: 84.0
2144 Female, age 91, right hemisphere 115.5
2191 Female, age 85, both hemispheres 78.2
2656 Male, age 76, both hemispheres 74.5
2307 Male, age 80, both hemispheres 67.8
Paramedian reticular nucleus
nTPM: 57.4
2313 Male, age 61, both hemispheres 62.1
2057 Male, age 80, both hemispheres 61.9
2052 Male, age 76, both hemispheres 53.0
2050 Female, age 85, both hemispheres 52.6
Parvicellular reticular nuclei
nTPM: 57.0
2095 Male, age 76, both hemispheres 59.8
2119 Male, age 80, both hemispheres 58.0
2558 Male, age 74, both hemispheres 53.1
Parvicellular reticular nuclei, medullary
nTPM: 61.2
2091 Female, age 85, both hemispheres 64.3
2181 Male, age 80, left hemisphere 62.4
2189 Female, age 91, both hemispheres 57.0
Pedunculopontine tegmental nucleus
nTPM: 58.6
1921 Female, age 85, both hemispheres 69.5
2334 Male, age 80, both hemispheres 58.4
2338 Male, age 61, both hemispheres 47.7
Peritrigeminal nucleus
nTPM: 73.2
2067 Female, age 85, both hemispheres 93.6
2136 Male, age 76, both hemispheres 63.4
2179 Male, age 61, both hemispheres 62.4
Pontine nuclei
nTPM: 51.2
1863 Male, age 55, unknown 60.5
2787 Female, age 85, both hemispheres 60.4
2109 Female, age 72, unknown 58.7
1968 Male, age 76, left hemisphere 58.2
2115 Male, age 80, left hemisphere 50.9
2727 Male, age 61, right hemisphere 47.3
2319 Female, age 91, both hemispheres 41.8
2454 Male, age 74, left hemisphere 31.9
Pontine raphe nucleus
nTPM: 62.8
2853 Male, age 76, midline 67.0
2122 Female, age 85, midline 58.5
Posteroventral cochlear nucleus
nTPM: 53.6
2752 Female, age 85, both hemispheres 62.6
2371 Male, age 61, both hemispheres 60.5
2070 Male, age 76, both hemispheres 56.9
2341 Male, age 80, both hemispheres 50.2
2135 Female, age 91, both hemispheres 37.9
Prepositus hypoglossal nucleus
nTPM: 72.5
2086 Male, age 80, both hemispheres 79.4
2855 Female, age 85, right hemisphere 65.5
Principal sensory trigeminal nucleus
nTPM: 56.0
2324 Male, age 76, both hemispheres 71.1
2008 Male, age 80, left hemisphere 59.4
2158 Male, age 61, both hemispheres 56.6
2367 Female, age 91, left hemisphere 37.0
Reticular pontine nucleus, caudal
nTPM: 48.2
2092 Male, age 76, both hemispheres 62.6
2332 Male, age 80, right hemisphere 52.0
2559 Male, age 74, both hemispheres 39.8
2457 Female, age 91, both hemispheres 38.4
Reticular pontine nucleus, oral
nTPM: 49.5
2012 Female, age 85, both hemispheres 59.7
2167 Male, age 76, both hemispheres 59.2
1939 Male, age 80, both hemispheres 54.8
2366 Female, age 91, both hemispheres 38.9
2361 Male, age 74, both hemispheres 35.1
Reticulotegmental nucleus
nTPM: 52.6
2325 Male, age 76, both hemispheres 62.1
2333 Male, age 80, both hemispheres 52.8
2322 Female, age 91, both hemispheres 50.2
2452 Male, age 74, both hemispheres 45.1
Spinal trigeminal nucleus, caudal
nTPM: 66.4
2642 Male, age 74, both hemispheres 76.4
2447 Male, age 76, both hemispheres 73.0
2308 Male, age 80, both hemispheres 68.1
2312 Male, age 61, both hemispheres 57.4
2390 Female, age 91, both hemispheres 57.2
Spinal trigeminal nucleus, interpolar
nTPM: 60.3
2625 Male, age 61, both hemispheres 71.2
2066 Male, age 76, right hemisphere 61.1
2386 Female, age 85, both hemispheres 59.1
2033 Male, age 80, both hemispheres 56.5
2389 Female, age 91, both hemispheres 53.6
Spinal trigeminal nucleus, oral
nTPM: 59.4
1978 Male, age 76, both hemispheres 69.7
2737 Female, age 85, both hemispheres 59.5
2164 Male, age 80, both hemispheres 48.9
Spinal vestibular nucleus
nTPM: 58.0
2780 Male, age 80, both hemispheres 63.7
2806 Female, age 85, both hemispheres 58.9
2748 Male, age 76, both hemispheres 58.6
2186 Female, age 91, both hemispheres 57.9
2796 Male, age 61, both hemispheres 56.8
2384 Male, age 74, both hemispheres 52.4
Subcoeruleus area
nTPM: 58.6
2089 Male, age 76, left hemisphere 64.0
2323 Female, age 91, left hemisphere 61.6
1958 Male, age 80, both hemispheres 61.4
2451 Male, age 74, both hemispheres 57.2
2369 Female, age 85, left hemisphere 48.9
Superior olive
nTPM: 60.1
2364 Male, age 74, right hemisphere 75.8
2020 Male, age 76, both hemispheres 65.2
1875 Female, age 85, both hemispheres 62.2
2329 Male, age 80, right hemisphere 50.9
2561 Female, age 91, both hemispheres 46.6
Superior vestibular nucleus
nTPM: 95.5
2383 Male, age 74, both hemispheres 124.5
2061 Male, age 76, both hemispheres 90.8
2015 Male, age 80, both hemispheres 71.1
Ventral medullary reticular nucleus
nTPM: 71.8
2372 Male, age 61, both hemispheres 80.8
2060 Male, age 76, both hemispheres 62.9
Ventral periolivary nuclei
nTPM: 61.1
2130 Female, age 85, both hemispheres 76.7
2023 Male, age 76, both hemispheres 62.3
2165 Male, age 80, both hemispheres 60.8
2794 Female, age 91, left hemisphere 44.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 67.8
2302 Female, age 91, both hemispheres 82.1
2180 Male, age 61, both hemispheres 71.2
2741 Female, age 85, both hemispheres 69.6
1986 Male, age 76, both hemispheres 61.8
2118 Male, age 80, both hemispheres 54.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 53.8
1959 Male, age 76, both hemispheres 62.9
2449 Male, age 74, both hemispheres 61.3
2840 Female, age 85, both hemispheres 53.7
2359 Male, age 61, both hemispheres 50.7
2161 Male, age 80, both hemispheres 49.2
2456 Female, age 91, both hemispheres 45.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 123.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 119.1
FF:10182-103D2 60 years, female 152.3
FF:10165-103B3 76 years, female 85.9
Medulla oblongata
Scaled Tags Per Million: 123.0
FF:10174-103C3 60 years, female 142.2
FF:10038-101F2 18-64 years, mixed 118.8
FF:10155-103A2 76 years, female 107.8
Pons
Scaled Tags Per Million: 56.7
FF:10033-101E6 18-54 years, mixed 56.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 24.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 24.9
Samples: 4

Max nTPM: 27.2
Min nTPM: 20.7
Sample A Female 25.6
Sample B Female 20.7
Sample C Male 27.2
Sample D Male 26.2
Pons
nTPM: 24.5
Samples: 4

Max nTPM: 34.2
Min nTPM: 19.9
Sample A Female 34.2
Sample B Female 20.6
Sample C Male 19.9
Sample D Male 23.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.8
Samples: 4

Max nTPM: 21.7
Min nTPM: 19.4
Sample A Male 21.7
Sample B Male 21.4
Sample C Female 19.4
Sample D Female 20.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.7
68862030 Antisense, RP_050301_01_D04, Mouse strain C57BL/6J (56 days, male) 2.7
Pons
Expression energy: 2.7
68862030 Antisense, RP_050301_01_D04, Mouse strain C57BL/6J (56 days, male) 2.7

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