HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.4 nTPM
HPA Brain:57.6 nTPM
GTEx:9.4 nTPM
FANTOM5:83.6 Scaled Tags Per Million
Pig:118.8 nTPM
Mouse:107.6 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.6
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 22.9
2529 Female, age 94, left hemisphere 21.9
1855 Male, age 76, left hemisphere 20.8
1898 Male, age 80, left hemisphere 20.6
2148 Female, age 91, left hemisphere 15.2
Dentate gyrus
nTPM: 22.5
2246 Female, age 85, both hemispheres 35.0
1927 Female, age 91, both hemispheres 25.2
2531 Female, age 67, both hemispheres 23.2
2528 Male, age 74, both hemispheres 19.0
2010 Male, age 76, both hemispheres 18.2
2530 Female, age 94, left hemisphere 14.4
Entorhinal gyrus
nTPM: 29.3
1787 Male, age 76, left hemisphere 44.2
2613 Female, age 94, left hemisphere 43.3
1938 Female, age 85, left hemisphere 33.7
2764 Male, age 80, right hemisphere 23.2
2686 Male, age 75, right hemisphere 19.9
2117 Female, age 91, right hemisphere 11.3
Hippocampus, CA1
nTPM: 25.7
2749 Male, age 80, left hemisphere 36.5
2082 Female, age 91, right hemisphere 26.4
2527 Male, age 74, both hemispheres 23.9
2045 Male, age 76, both hemispheres 21.5
1873 Female, age 85, both hemispheres 20.2
Hippocampus, CA2
nTPM: 27.8
1940 Female, age 85, left hemisphere 35.5
1892 Male, age 76, both hemispheres 34.1
2437 Female, age 94, left hemisphere 31.1
2113 Female, age 91, right hemisphere 27.8
2249 Male, age 74, both hemispheres 19.3
1963 Male, age 80, left hemisphere 18.7
Hippocampus, CA3
nTPM: 26.5
2620 Female, age 94, left hemisphere 35.8
1867 Male, age 76, both hemispheres 31.2
2137 Male, age 80, left hemisphere 30.9
2436 Male, age 74, both hemispheres 21.6
2861 Female, age 67, both hemispheres 20.5
1891 Female, age 85, both hemispheres 19.0
Parahippocampal cortex
nTPM: 41.1
2250 Female, age 67, right hemisphere 72.2
2693 Female, age 94, both hemispheres 53.1
2245 Female, age 91, both hemispheres 46.3
2532 Female, age 72, left hemisphere 41.1
1933 Female, age 85, both hemispheres 39.5
2018 Male, age 76, both hemispheres 36.5
1850 Male, age 80, both hemispheres 34.8
2622 Female, age 67, right hemisphere 33.9
1990 Female, age 91, right hemisphere 32.7
2692 Male, age 74, both hemispheres 21.2
Perirhinal gyrus
nTPM: 57.6
2521 Female, age 94, right hemisphere 68.3
1794 Male, age 80, right hemisphere 60.8
1841 Female, age 85, right hemisphere 59.6
1847 Female, age 91, left hemisphere 55.4
2848 Male, age 76, right hemisphere 44.1
Subiculum
nTPM: 25.0
2438 Female, age 94, left hemisphere 34.7
2619 Male, age 74, both hemispheres 31.2
1977 Female, age 85, both hemispheres 30.7
1901 Male, age 80, both hemispheres 21.3
2042 Male, age 76, both hemispheres 19.1
2729 Female, age 91, right hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 9.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.4
Samples: 197

Max nTPM: 49.3
Min nTPM: 0.1
Std nTPM: 7.5
Median nTPM: 7.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 49.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 34.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 33.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 32.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 31.1
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 28.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 25.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 25.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 83.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.6
FF:10169-103B7 60 years, female 105.9
FF:10153-102I9 76 years, female 61.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 118.8
Pig sample Sample description nTPM
Subiculum
nTPM: 105.6
Samples: 4

Max nTPM: 142.7
Min nTPM: 80.6
Sample A Female 142.7
Sample B Female 104.4
Sample C Male 94.5
Sample D Male 80.6
Dorsal hippocampus
nTPM: 89.2
Samples: 4

Max nTPM: 106.5
Min nTPM: 71.2
Sample A Female 106.5
Sample B Female 100.6
Sample C Male 71.2
Sample D Male 78.6
Entorhinal cortex
nTPM: 118.8
Samples: 4

Max nTPM: 151.3
Min nTPM: 104.4
Sample A Female 151.3
Sample B Female 106.1
Sample C Male 113.3
Sample D Male 104.4
Ventral hippocampus
nTPM: 87.4
Samples: 4

Max nTPM: 103.1
Min nTPM: 72.6
Sample A Female 72.6
Sample B Female 75.0
Sample C Male 103.1
Sample D Male 98.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 107.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.7
Samples: 4

Max nTPM: 121.8
Min nTPM: 102.6
Sample A Male 103.2
Sample B Male 102.6
Sample C Female 103.0
Sample D Female 121.8
Hippocampal formation
nTPM: 103.1
Samples: 4

Max nTPM: 110.1
Min nTPM: 93.9
Sample A Male 104.7
Sample B Male 110.1
Sample C Female 103.7
Sample D Female 93.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
71836843 Antisense, RP_051017_02_C06, Mouse strain C57BL/6J (56 days, male) 9.2
68157400 Antisense, RP_041116_02_E03, Mouse strain C57BL/6J (56 days, male) 3.6

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