We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HARS1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HARS1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:57.9 nTPM
HPA Brain:33.8 nTPM
GTEx:57.9 nTPM
FANTOM5:92.4 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:96.8 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA036539
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 31.1
2846 Female, age 79, unknown 36.2
2481 Female, age 94, left hemisphere 34.4
1781 Male, age 74, unknown 32.5
1857 Female, age 85, left hemisphere 32.4
1854 Male, age 80, left hemisphere 31.4
2288 Male, age 75, left hemisphere 31.0
2290 Female, age 72, unknown 29.9
2289 Male, age 61, right hemisphere 21.4
Globus pallidus, externus
nTPM: 24.1
2772 Female, age 79, unknown 34.5
2395 Male, age 75, both hemispheres 29.9
1996 Male, age 80, right hemisphere 22.8
2646 Male, age 61, right hemisphere 18.0
2567 Female, age 72, unknown 15.6
Globus pallidus, internus
nTPM: 24.3
2287 Male, age 75, right hemisphere 35.5
2483 Female, age 94, right hemisphere 34.3
1818 Male, age 74, unknown 27.3
2037 Male, age 80, right hemisphere 20.9
2778 Female, age 91, both hemispheres 20.8
2566 Female, age 72, unknown 17.7
2111 Female, age 85, right hemisphere 13.3
Nucleus accumbens
nTPM: 30.4
1856 Female, age 91, right hemisphere 47.8
2286 Male, age 75, left hemisphere 33.8
2698 Female, age 72, unknown 30.0
1783 Male, age 74, unknown 29.5
2391 Female, age 94, left hemisphere 29.5
2824 Male, age 61, right hemisphere 29.3
1806 Female, age 85, left hemisphere 28.3
2732 Male, age 80, right hemisphere 15.3
Nucleus basalis of Meynert
nTPM: 27.7
2821 Male, age 75, both hemispheres 36.6
2393 Male, age 80, right hemisphere 29.1
2484 Female, age 94, left hemisphere 27.1
2569 Male, age 61, both hemispheres 18.0
Nucleus of the diagonal band
nTPM: 33.1
1812 Female, age 91, both hemispheres 43.6
2775 Male, age 80, right hemisphere 38.2
2029 Male, age 61, right hemisphere 36.1
2195 Female, age 85, both hemispheres 29.1
1979 Male, age 74, unknown 18.8
Putamen
nTPM: 32.1
1838 Male, age 80, right hemisphere 36.7
2482 Female, age 94, left hemisphere 35.8
2466 Female, age 79, unknown 34.0
1937 Female, age 91, right hemisphere 33.9
1829 Male, age 74, unknown 33.6
2647 Male, age 75, left hemisphere 32.6
2489 Female, age 72, unknown 17.9
Septal nuclei
nTPM: 28.6
2629 Female, age 94, right hemisphere 40.1
2031 Female, age 72, unknown 37.7
1960 Male, age 74, unknown 34.6
2009 Female, age 91, both hemispheres 30.3
2059 Female, age 85, both hemispheres 20.8
2199 Male, age 80, right hemisphere 18.3
2394 Male, age 61, left hemisphere 18.2
Stria terminalis, bed nucleus
nTPM: 33.8
1974 Female, age 91, both hemispheres 45.0
2486 Female, age 94, both hemispheres 34.5
2201 Male, age 74, unknown 22.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 55.6
Samples: 246

Max nTPM: 92.6
Min nTPM: 29.8
Std nTPM: 13.5
Median nTPM: 54.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 92.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 89.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 87.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 86.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 85.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 84.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 82.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 81.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 80.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 80.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 80.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 79.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 77.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 77.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 76.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 76.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 76.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 75.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 73.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 73.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 73.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 72.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 71.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 71.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 70.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 70.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 69.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 68.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 68.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 68.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 68.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 67.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 66.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 66.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 66.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 66.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 65.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 65.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 65.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 64.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 64.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 64.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 63.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 63.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 63.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 62.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 62.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 62.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 62.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 62.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 61.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 61.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 61.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 60.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 60.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 60.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 60.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 60.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 59.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 59.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 59.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 59.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 59.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 58.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 58.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 58.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 58.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 57.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 57.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 56.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 56.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 55.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 55.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 55.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 55.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 55.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 55.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 54.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 54.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 54.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 54.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 54.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 53.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 53.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 53.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 53.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 53.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 53.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 53.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 53.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 52.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 52.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 52.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 52.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 52.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 51.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 51.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 49.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 49.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 48.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 48.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 48.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 48.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 47.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 47.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 46.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 46.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 46.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 46.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 46.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 46.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 46.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 45.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 45.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 44.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 44.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 44.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 44.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 44.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 43.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 42.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 42.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 42.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 41.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 40.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 39.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 39.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 39.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 39.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 39.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 38.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 38.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 36.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 36.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 36.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 36.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 36.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 35.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 35.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 35.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 35.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 34.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 34.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 34.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 34.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 34.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 33.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 33.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 32.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 31.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 31.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 29.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 57.6
Samples: 246

Max nTPM: 95.9
Min nTPM: 28.3
Std nTPM: 12.6
Median nTPM: 58.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 95.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 94.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 93.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 87.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 87.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 85.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 84.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 82.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 80.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 79.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 79.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 78.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 78.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 78.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 77.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 77.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 77.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 76.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 76.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 76.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 75.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 75.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 75.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 73.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 73.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 73.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 71.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 71.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 71.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 71.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 70.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 70.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 70.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 69.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 68.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 68.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 68.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 68.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 68.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 68.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 68.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 67.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 67.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 67.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 67.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 67.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 66.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 66.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 66.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 66.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 65.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 65.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 65.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 65.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 65.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 65.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 65.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 65.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 65.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 65.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 64.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 64.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 64.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 64.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 64.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 63.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 63.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 63.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 63.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 63.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 63.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 63.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 63.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 63.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 63.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 62.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 62.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 62.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 62.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 62.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 61.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 61.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 61.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 61.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 61.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 61.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 61.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 61.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 60.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 60.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 60.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 60.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 59.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 59.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 59.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 59.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 59.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 59.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 59.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 58.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 58.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 58.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 58.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 58.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 58.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 58.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 58.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 58.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 57.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 57.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 57.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 57.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 56.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 56.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 56.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 56.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 56.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 56.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 55.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 55.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 55.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 55.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 55.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 55.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 55.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 54.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 54.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 54.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 54.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 54.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 54.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 53.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 52.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 52.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 52.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 52.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 52.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 52.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 52.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 52.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 52.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 51.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 51.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 51.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 51.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 51.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 51.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 51.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 50.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 50.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 50.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 50.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 49.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 49.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 49.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 49.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 49.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 49.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 49.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 48.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 48.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 48.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 47.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 47.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 47.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 47.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 46.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 46.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 46.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 46.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 46.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 45.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 45.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 45.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 45.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 44.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 44.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 44.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 43.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 43.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 43.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 43.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 43.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 43.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 43.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 42.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 42.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 41.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 41.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 41.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 41.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 40.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 40.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 40.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 39.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 39.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 39.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 38.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 38.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 37.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 37.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 37.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 36.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 36.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 35.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 35.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 35.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 34.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 33.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 33.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 30.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 28.3
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 57.9
Samples: 205

Max nTPM: 93.9
Min nTPM: 25.9
Std nTPM: 14.5
Median nTPM: 57.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 93.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 93.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 92.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 91.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 90.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 89.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 87.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 85.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 85.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 82.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 81.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 80.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 80.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 79.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 79.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 78.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 78.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 78.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 77.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 77.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 77.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 76.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 76.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 76.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 76.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 75.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 74.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 74.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 74.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 73.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 73.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 73.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 73.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 72.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 72.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 71.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 71.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 71.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 71.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 71.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 70.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 69.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 69.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 69.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 69.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 68.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 68.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 68.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 68.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 68.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 68.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 67.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 67.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 67.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 67.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 67.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 66.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 66.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 65.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 65.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 65.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 64.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 63.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 63.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 63.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 63.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 63.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 63.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 62.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 62.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 61.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 61.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 61.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 61.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 61.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 60.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 60.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 60.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 60.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 59.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 59.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 58.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 58.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 57.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 57.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 57.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 57.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 57.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 57.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 56.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 56.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 56.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 56.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 56.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 55.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 54.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 54.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 54.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 53.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 53.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 53.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 53.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 53.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 53.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 53.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 52.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 52.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 52.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 52.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 51.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 51.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 51.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 51.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 51.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 51.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 51.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 50.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 50.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 50.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 50.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 48.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 48.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 48.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 48.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 47.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 47.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 46.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 46.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 46.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 46.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 45.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 45.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 45.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 45.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 45.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 44.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 43.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 43.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 42.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 42.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 42.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 42.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 41.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 41.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 41.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 40.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 40.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 40.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 40.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 39.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 38.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 38.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 38.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 38.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 37.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 37.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 37.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 36.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 35.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 35.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 34.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 34.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 34.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 34.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 32.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 32.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 31.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 31.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 25.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

92.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 91.0
FF:10164-103B2 76 years, female 91.0
Nucleus accumbens
Scaled Tags Per Million: 92.4
FF:10037-101F1 23-56 years, mixed 92.4
Putamen
Scaled Tags Per Million: 87.2
FF:10176-103C5 60 years, female 87.2
Globus pallidus
Scaled Tags Per Million: 59.4
FF:10175-103C4 60 years, female 59.6
FF:10161-103A8 76 years, female 59.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.1
Pig sample Sample description nTPM
Caudate
nTPM: 21.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 18.9
Sample A Female 18.9
Sample B Female 21.0
Sample C Male 25.5
Sample D Male 19.1
Putamen
nTPM: 20.4
Samples: 4

Max nTPM: 28.8
Min nTPM: 15.2
Sample A Female 15.2
Sample B Female 18.1
Sample C Male 28.8
Sample D Male 19.6
Septum
nTPM: 20.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 18.9
Sample A Female 22.4
Sample B Female 18.9
Sample C Male 22.6
Sample D Male 19.1
Ventral pallidum
nTPM: 20.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 17.2
Sample A Female 19.2
Sample B Female 20.4
Sample C Male 24.5
Sample D Male 17.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

96.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 82.1
Samples: 4

Max nTPM: 84.6
Min nTPM: 79.3
Sample A Male 80.5
Sample B Male 79.3
Sample C Female 84.0
Sample D Female 84.6
Septum
nTPM: 96.8
Samples: 4

Max nTPM: 101.0
Min nTPM: 90.7
Sample A Male 100.4
Sample B Male 101.0
Sample C Female 95.2
Sample D Female 90.7
Ventral forebrain
nTPM: 88.5
Samples: 4

Max nTPM: 89.7
Min nTPM: 88.1
Sample A Male 88.1
Sample B Male 89.7
Sample C Female 88.1
Sample D Female 88.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
554 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.1
555 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
554 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.1
555 Antisense, RP_040304_01_03, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org