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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:20.2 nTPM
HPA Brain:19.1 nTPM
GTEx:20.2 nTPM
FANTOM5:96.6 Scaled Tags Per Million
Pig:12.3 nTPM
Mouse:4.2 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001887Antibody HPA002127Antibody CAB033631Antibody CAB072865Antibody CAB072866
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detectedNot detectedNot detected











BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 16.2
2846 Female, age 79, unknown 25.7
1781 Male, age 74, unknown 19.6
2289 Male, age 61, right hemisphere 19.6
1857 Female, age 85, left hemisphere 16.3
2481 Female, age 94, left hemisphere 15.9
1854 Male, age 80, left hemisphere 15.4
2290 Female, age 72, unknown 11.9
2288 Male, age 75, left hemisphere 5.6
Globus pallidus, externus
nTPM: 19.1
2395 Male, age 75, both hemispheres 34.6
2772 Female, age 79, unknown 24.6
1996 Male, age 80, right hemisphere 22.9
2567 Female, age 72, unknown 10.6
2646 Male, age 61, right hemisphere 2.6
Globus pallidus, internus
nTPM: 16.0
2037 Male, age 80, right hemisphere 22.7
2111 Female, age 85, right hemisphere 18.2
2778 Female, age 91, both hemispheres 17.0
2566 Female, age 72, unknown 16.4
1818 Male, age 74, unknown 14.0
2483 Female, age 94, right hemisphere 13.6
2287 Male, age 75, right hemisphere 10.2
Nucleus accumbens
nTPM: 12.9
2732 Male, age 80, right hemisphere 23.5
1856 Female, age 91, right hemisphere 18.1
1806 Female, age 85, left hemisphere 14.9
1783 Male, age 74, unknown 13.5
2698 Female, age 72, unknown 12.6
2391 Female, age 94, left hemisphere 11.9
2286 Male, age 75, left hemisphere 5.3
2824 Male, age 61, right hemisphere 3.1
Nucleus basalis of Meynert
nTPM: 14.1
2393 Male, age 80, right hemisphere 19.5
2821 Male, age 75, both hemispheres 18.2
2484 Female, age 94, left hemisphere 15.4
2569 Male, age 61, both hemispheres 3.3
Nucleus of the diagonal band
nTPM: 14.2
1812 Female, age 91, both hemispheres 20.4
1979 Male, age 74, unknown 17.0
2029 Male, age 61, right hemisphere 13.6
2775 Male, age 80, right hemisphere 11.1
2195 Female, age 85, both hemispheres 9.0
Putamen
nTPM: 16.8
2482 Female, age 94, left hemisphere 29.6
2466 Female, age 79, unknown 23.6
2489 Female, age 72, unknown 21.4
1937 Female, age 91, right hemisphere 19.3
1829 Male, age 74, unknown 11.8
1838 Male, age 80, right hemisphere 8.3
2647 Male, age 75, left hemisphere 3.7
Septal nuclei
nTPM: 17.4
2394 Male, age 61, left hemisphere 29.3
2199 Male, age 80, right hemisphere 25.9
2009 Female, age 91, both hemispheres 16.9
2059 Female, age 85, both hemispheres 14.5
2031 Female, age 72, unknown 12.3
1960 Male, age 74, unknown 11.8
2629 Female, age 94, right hemisphere 11.5
Stria terminalis, bed nucleus
nTPM: 11.6
1974 Female, age 91, both hemispheres 12.9
2201 Male, age 74, unknown 12.0
2486 Female, age 94, both hemispheres 9.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 20.2
Samples: 246

Max nTPM: 169.6
Min nTPM: 3.0
Std nTPM: 21.3
Median nTPM: 12.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 169.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 125.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 100.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 94.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 93.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 87.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 83.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 75.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 64.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 51.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 49.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 47.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 44.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 44.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 44.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 43.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 43.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 41.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 41.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 41.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 39.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 39.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 36.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 35.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 33.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 32.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 31.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 31.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 30.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 29.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 28.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 28.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 28.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 26.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 26.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 26.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 26.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 25.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 24.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 24.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 24.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 23.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 23.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 23.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 23.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 21.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 21.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 21.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 21.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 21.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 20.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 20.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 20.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 20.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 19.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 19.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 19.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 19.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 19.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 18.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 18.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 18.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 18.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 17.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 16.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 16.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 16.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 16.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 16.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 15.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 15.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 15.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 15.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 15.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 15.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 14.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 14.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 14.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 14.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 14.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 14.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 13.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 13.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 13.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 13.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 13.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 12.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 12.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 12.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 12.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 12.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 12.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 12.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 12.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 12.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 12.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 12.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 12.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 11.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 11.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 11.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 11.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 11.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 11.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 11.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 11.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 11.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 11.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 10.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 10.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 10.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 10.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 10.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 10.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 10.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 9.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 9.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 9.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 9.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 9.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 9.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 9.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 9.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 9.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 9.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 9.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 8.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 8.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 8.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 8.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 8.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 8.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 8.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 8.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 8.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 8.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 8.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 8.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 8.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 8.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 8.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 8.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 8.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 8.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 7.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 7.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 7.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 7.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 7.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 7.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 7.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 7.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 7.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 7.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 6.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 6.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 6.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 6.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 6.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 6.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 6.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 6.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 6.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 6.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 6.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 6.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 6.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 6.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 6.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 6.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 6.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 6.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 6.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 6.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 5.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 5.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 5.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 5.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 5.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 5.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 5.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 5.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 5.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 5.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 4.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 4.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 3.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 3.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.9
Samples: 246

Max nTPM: 145.2
Min nTPM: 1.8
Std nTPM: 19.9
Median nTPM: 8.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 145.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 99.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 95.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 95.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 91.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 75.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 74.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 65.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 63.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 62.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 60.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 53.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 50.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 50.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 48.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 48.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 45.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 43.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 42.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 42.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 40.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 40.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 39.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 37.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 37.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 37.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 35.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 35.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 33.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 32.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 32.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 31.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 29.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 28.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 28.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 28.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 27.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 26.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 26.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 25.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 25.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 24.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 24.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 23.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 22.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 22.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 22.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 22.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 22.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 21.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 20.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 20.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 20.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 19.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 18.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 17.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 17.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 16.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 16.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 16.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 16.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 15.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 15.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 15.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 14.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 14.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 13.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 13.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 13.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 13.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 13.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 12.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 12.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 12.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 12.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 12.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 12.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 11.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 11.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 11.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 11.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 11.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 11.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 11.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 10.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 10.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 10.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 10.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 10.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 10.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 10.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 10.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 10.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 10.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 10.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 9.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 9.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 9.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 9.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 9.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 9.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 9.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 9.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 8.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 8.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 8.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 8.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 8.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 8.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 8.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 8.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 8.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 8.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 8.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 8.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 8.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 7.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 7.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 7.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 7.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 7.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 7.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 7.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 7.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 7.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 7.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 7.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 7.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 7.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 7.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 7.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 6.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 6.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 6.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 6.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 6.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 6.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 6.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 6.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 6.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 6.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 6.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 6.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 6.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 6.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 6.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 6.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 6.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 6.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 5.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 5.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 5.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 5.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 5.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 5.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 5.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 5.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 5.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 5.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 5.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 5.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 5.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 5.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 5.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 5.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 5.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 5.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 5.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 4.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 4.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 4.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 4.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 4.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 4.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 4.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 4.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 4.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 4.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 4.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 4.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 4.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 4.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 4.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 4.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 4.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 4.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 4.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 3.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 3.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 3.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 3.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 3.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 3.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 3.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 3.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 3.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 3.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 2.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 2.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 2.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1.8
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Brain - Putamen (basal ganglia)
Average nTPM: 18.5
Samples: 205

Max nTPM: 119.5
Min nTPM: 2.6
Std nTPM: 20.0
Median nTPM: 10.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 119.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 98.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 95.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 94.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 93.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 83.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 80.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 77.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 77.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 68.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 68.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 57.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 49.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 49.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 46.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 45.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 45.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 44.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 44.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 40.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 39.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 39.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 38.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 37.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 37.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 36.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 33.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 33.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 33.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 31.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 29.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 29.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 28.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 27.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 26.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 26.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 26.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 25.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 25.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 25.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 24.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 24.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 24.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 23.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 21.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 21.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 20.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 20.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 20.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 19.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 19.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 19.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 19.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 18.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 17.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 17.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 17.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 17.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 16.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 15.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 14.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 14.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 14.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 14.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 13.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 13.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 13.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 13.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 13.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 13.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 13.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 12.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 12.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 12.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 12.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 12.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 12.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 12.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 12.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 12.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 12.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 11.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 11.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 11.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 11.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 10.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 10.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 10.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 10.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 10.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 10.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 10.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 10.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 10.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 9.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 9.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 9.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 9.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 9.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 9.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 9.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 9.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 8.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 8.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 8.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 8.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 8.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 8.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 7.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 7.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 7.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 7.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 7.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 7.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 7.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 7.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 7.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 7.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 7.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 7.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 6.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 6.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 6.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 6.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 6.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 6.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 6.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 6.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 6.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 5.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 5.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 5.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 5.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 5.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 5.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 5.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 5.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 5.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 5.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 5.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 5.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 5.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 4.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 4.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 4.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 4.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 4.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 4.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 4.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 4.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 4.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 4.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 2.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 2.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

96.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 54.1
FF:10164-103B2 76 years, female 54.1
Nucleus accumbens
Scaled Tags Per Million: 15.1
FF:10037-101F1 23-56 years, mixed 15.1
Putamen
Scaled Tags Per Million: 54.7
FF:10176-103C5 60 years, female 54.7
Globus pallidus
Scaled Tags Per Million: 96.6
FF:10161-103A8 76 years, female 132.9
FF:10175-103C4 60 years, female 60.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.3
Pig sample Sample description nTPM
Caudate
nTPM: 8.5
Samples: 4

Max nTPM: 10.2
Min nTPM: 7.4
Sample A Female 8.4
Sample B Female 10.2
Sample C Male 7.4
Sample D Male 7.8
Putamen
nTPM: 8.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 6.0
Sample A Female 9.6
Sample B Female 8.2
Sample C Male 6.0
Sample D Male 9.0
Septum
nTPM: 12.3
Samples: 4

Max nTPM: 13.4
Min nTPM: 11.8
Sample A Female 11.8
Sample B Female 11.8
Sample C Male 13.4
Sample D Male 12.0
Ventral pallidum
nTPM: 9.5
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.9
Sample A Female 9.8
Sample B Female 8.9
Sample C Male 9.2
Sample D Male 9.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.7
Sample A Male 3.9
Sample B Male 5.0
Sample C Female 3.7
Sample D Female 4.3
Septum
nTPM: 2.9
Samples: 4

Max nTPM: 3.1
Min nTPM: 2.5
Sample A Male 2.5
Sample B Male 2.9
Sample C Female 3.0
Sample D Female 3.1
Ventral forebrain
nTPM: 3.5
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.6
Sample A Male 3.8
Sample B Male 2.6
Sample C Female 4.8
Sample D Female 2.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
69028521 Antisense, RP_050316_01_E01, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
69028521 Antisense, RP_050316_01_E01, Mouse strain C57BL/6J (56 days, male) 0.2

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