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  • NPAS2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:23.4 nTPM
HPA Brain:59.7 nTPM
GTEx:23.4 nTPM
FANTOM5:107.2 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:20.8 nTPM
Allen mouse:3.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA019674
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 59.7
2290 Female, age 72, unknown 83.0
1781 Male, age 74, unknown 69.7
1857 Female, age 85, left hemisphere 67.0
1854 Male, age 80, left hemisphere 64.4
2289 Male, age 61, right hemisphere 64.1
2846 Female, age 79, unknown 54.4
2481 Female, age 94, left hemisphere 40.9
2288 Male, age 75, left hemisphere 34.1
Globus pallidus, externus
nTPM: 31.0
2646 Male, age 61, right hemisphere 50.9
1996 Male, age 80, right hemisphere 30.3
2395 Male, age 75, both hemispheres 27.9
2567 Female, age 72, unknown 24.2
2772 Female, age 79, unknown 21.5
Globus pallidus, internus
nTPM: 24.2
2483 Female, age 94, right hemisphere 41.1
2037 Male, age 80, right hemisphere 26.5
2287 Male, age 75, right hemisphere 25.7
2111 Female, age 85, right hemisphere 21.6
1818 Male, age 74, unknown 19.1
2566 Female, age 72, unknown 18.0
2778 Female, age 91, both hemispheres 17.4
Nucleus accumbens
nTPM: 55.0
1783 Male, age 74, unknown 77.7
1856 Female, age 91, right hemisphere 71.3
1806 Female, age 85, left hemisphere 68.9
2698 Female, age 72, unknown 60.7
2824 Male, age 61, right hemisphere 58.7
2732 Male, age 80, right hemisphere 36.9
2391 Female, age 94, left hemisphere 33.3
2286 Male, age 75, left hemisphere 32.0
Nucleus basalis of Meynert
nTPM: 47.9
2569 Male, age 61, both hemispheres 57.1
2393 Male, age 80, right hemisphere 50.1
2484 Female, age 94, left hemisphere 49.2
2821 Male, age 75, both hemispheres 35.0
Nucleus of the diagonal band
nTPM: 51.9
2195 Female, age 85, both hemispheres 65.3
2775 Male, age 80, right hemisphere 56.3
2029 Male, age 61, right hemisphere 50.6
1812 Female, age 91, both hemispheres 49.0
1979 Male, age 74, unknown 38.6
Putamen
nTPM: 52.7
1838 Male, age 80, right hemisphere 62.5
2489 Female, age 72, unknown 60.1
1829 Male, age 74, unknown 57.5
1937 Female, age 91, right hemisphere 56.0
2466 Female, age 79, unknown 49.7
2482 Female, age 94, left hemisphere 42.4
2647 Male, age 75, left hemisphere 41.0
Septal nuclei
nTPM: 51.8
1960 Male, age 74, unknown 76.6
2031 Female, age 72, unknown 64.0
2629 Female, age 94, right hemisphere 55.9
2059 Female, age 85, both hemispheres 53.9
2009 Female, age 91, both hemispheres 47.0
2199 Male, age 80, right hemisphere 35.8
2394 Male, age 61, left hemisphere 29.2
Stria terminalis, bed nucleus
nTPM: 45.1
2486 Female, age 94, both hemispheres 60.2
1974 Female, age 91, both hemispheres 40.4
2201 Male, age 74, unknown 34.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 22.6
Samples: 246

Max nTPM: 52.1
Min nTPM: 6.9
Std nTPM: 8.6
Median nTPM: 21.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 52.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 48.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 43.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 43.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 41.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 40.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 39.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 39.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 38.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 37.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 36.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 35.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 35.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 35.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 35.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 35.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 34.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 34.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 34.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 33.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 33.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 33.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 33.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 32.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 31.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 31.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 31.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 31.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 31.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 31.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 30.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 30.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 29.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 29.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 29.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 29.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 29.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 29.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 29.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 28.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 28.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 28.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 28.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 28.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 28.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 28.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 28.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 28.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 28.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 28.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 27.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 27.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 27.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 27.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 27.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 27.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 26.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 26.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 26.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 26.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 25.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 25.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 25.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 25.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 25.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 25.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 25.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 25.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 25.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 25.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 25.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 25.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 24.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 24.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 24.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 24.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 24.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 24.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 24.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 24.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 24.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 24.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 24.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 24.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 23.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 23.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 23.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 23.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 23.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 23.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 22.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 22.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 22.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 22.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 22.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 22.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 22.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 22.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 22.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 21.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 21.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 21.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 21.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 21.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 21.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 21.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 21.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 21.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 21.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 20.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 20.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 20.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 20.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 20.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 20.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 20.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 20.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 19.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 19.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 19.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 19.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 19.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 19.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 19.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 19.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 19.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 19.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 19.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 19.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 19.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 18.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 18.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 18.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 18.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 18.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 18.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 17.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 17.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 17.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 17.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 17.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 17.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 17.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 17.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 16.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 16.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 16.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 16.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 16.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 16.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 16.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 15.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 15.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 15.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 15.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 15.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 15.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 15.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 15.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 15.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 15.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 15.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 15.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 15.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 15.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 15.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 15.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 15.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 14.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 14.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 14.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 14.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 14.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 14.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 13.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 13.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 13.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 13.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 13.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 13.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 13.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 13.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 13.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 13.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 13.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 13.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 13.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 13.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 13.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 12.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 12.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 12.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 12.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 12.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 12.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 12.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 11.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 11.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 11.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 11.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 11.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 10.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 9.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 8.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 6.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 23.4
Samples: 246

Max nTPM: 47.6
Min nTPM: 3.3
Std nTPM: 8.1
Median nTPM: 24.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 47.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 46.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 39.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 38.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 38.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 38.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 37.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 36.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 35.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 35.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 35.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 35.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 34.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 34.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 34.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 33.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 33.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 33.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 33.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 33.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 33.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 32.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 32.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 31.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 31.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 31.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 31.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 31.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 31.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 31.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 31.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 31.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 30.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 30.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 30.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 30.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 30.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 30.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 30.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 30.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 30.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 30.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 30.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 29.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 29.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 29.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 29.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 29.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 29.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 29.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 29.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 29.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 29.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 29.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 29.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 29.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 29.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 28.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 28.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 28.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 28.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 28.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 28.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 28.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 28.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 28.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 28.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 27.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 27.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 27.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 27.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 27.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 27.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 27.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 27.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 26.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 26.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 26.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 26.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 26.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 26.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 26.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 26.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 26.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 25.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 25.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 25.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 25.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 25.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 25.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 25.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 25.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 25.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 25.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 25.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 25.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 25.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 25.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 25.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 25.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 25.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 25.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 25.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 25.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 25.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 24.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 24.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 24.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 24.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 24.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 24.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 24.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 24.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 24.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 24.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 24.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 24.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 24.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 24.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 24.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 23.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 23.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 23.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 23.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 23.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 23.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 23.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 23.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 22.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 22.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 22.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 22.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 22.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 22.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 22.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 22.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 22.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 22.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 22.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 21.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 21.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 21.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 21.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 21.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 21.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 20.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 20.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 20.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 20.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 20.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 20.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 19.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 19.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 19.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 19.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 19.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 19.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 19.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 19.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 19.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 19.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 19.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 18.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 18.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 18.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 18.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 18.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 18.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 18.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 17.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 17.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 17.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 16.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 16.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 16.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 15.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 15.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 15.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 15.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 15.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 15.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 15.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 14.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 14.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 14.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 14.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 14.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 13.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 13.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 13.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 13.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 13.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 13.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 13.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 13.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 12.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 12.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 12.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 12.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 12.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 12.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 12.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 11.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 11.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 11.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 11.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 11.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 11.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 10.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 9.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 9.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 9.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 9.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 9.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 9.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 7.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 6.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.3
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Brain - Putamen (basal ganglia)
Average nTPM: 19.2
Samples: 205

Max nTPM: 54.1
Min nTPM: 7.4
Std nTPM: 7.0
Median nTPM: 18.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 39.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 37.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 36.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 36.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 35.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 34.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 33.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 29.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 29.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 28.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 27.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 27.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 27.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 27.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 27.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 27.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 26.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 26.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 26.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 26.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 26.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 25.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 25.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 25.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 25.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 25.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 25.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 24.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 24.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 24.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 24.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 24.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 24.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 24.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 24.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 24.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 24.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 23.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 23.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 23.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 23.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 23.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 23.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 23.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 23.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 23.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 23.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 22.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 22.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 22.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 22.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 22.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 22.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 22.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 22.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 21.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 21.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 21.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 21.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 21.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 21.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 21.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 21.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 21.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 21.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 21.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 21.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 21.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 21.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 20.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 20.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 20.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 20.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 20.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 20.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 20.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 20.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 20.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 20.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 19.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 19.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 19.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 19.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 19.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 19.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 19.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 19.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 19.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 19.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 18.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 18.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 18.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 18.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 18.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 18.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 18.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 18.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 17.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 17.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 17.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 17.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 17.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 17.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 17.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 17.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 17.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 16.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 16.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 16.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 15.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 15.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 15.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 15.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 15.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 15.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 15.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 15.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 14.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 14.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 14.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 14.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 14.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 14.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 13.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 13.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 13.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 13.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 13.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 13.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 13.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 13.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 13.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 13.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 12.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 12.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 12.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 12.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 12.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 12.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 12.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 12.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 11.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 11.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 11.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 11.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 11.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 10.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 10.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 10.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 10.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 10.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 10.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 9.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 9.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 9.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 9.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 8.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 7.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 7.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 7.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 7.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

107.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 107.2
FF:10164-103B2 76 years, female 107.2
Nucleus accumbens
Scaled Tags Per Million: 95.4
FF:10037-101F1 23-56 years, mixed 95.4
Putamen
Scaled Tags Per Million: 90.7
FF:10176-103C5 60 years, female 90.7
Globus pallidus
Scaled Tags Per Million: 45.2
FF:10175-103C4 60 years, female 54.1
FF:10161-103A8 76 years, female 36.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.7
Pig sample Sample description nTPM
Caudate
nTPM: 29.7
Samples: 4

Max nTPM: 33.4
Min nTPM: 25.6
Sample A Female 25.6
Sample B Female 33.4
Sample C Male 31.9
Sample D Male 27.8
Putamen
nTPM: 20.1
Samples: 4

Max nTPM: 24.6
Min nTPM: 16.0
Sample A Female 16.3
Sample B Female 24.6
Sample C Male 16.0
Sample D Male 23.6
Septum
nTPM: 25.5
Samples: 4

Max nTPM: 30.7
Min nTPM: 15.4
Sample A Female 29.7
Sample B Female 30.7
Sample C Male 15.4
Sample D Male 26.3
Ventral pallidum
nTPM: 27.3
Samples: 4

Max nTPM: 31.5
Min nTPM: 22.2
Sample A Female 31.5
Sample B Female 28.1
Sample C Male 22.2
Sample D Male 27.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 18.5
Sample A Male 21.6
Sample B Male 22.9
Sample C Female 20.0
Sample D Female 18.5
Septum
nTPM: 10.3
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.3
Sample A Male 11.7
Sample B Male 9.3
Sample C Female 9.7
Sample D Female 10.6
Ventral forebrain
nTPM: 17.1
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.0
Sample A Male 16.3
Sample B Male 15.0
Sample C Female 17.0
Sample D Female 20.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
70593327 Antisense, RP_050407_03_D11, Mouse strain C57BL/6J (56 days, male) 3.9
74724764 Antisense, RP_060220_04_B07, Mouse strain C57BL/6J (56 days, male) 3.6
Pallidum
Expression energy: 1.0
70593327 Antisense, RP_050407_03_D11, Mouse strain C57BL/6J (56 days, male) 1.4
74724764 Antisense, RP_060220_04_B07, Mouse strain C57BL/6J (56 days, male) 0.6

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