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  • PFKFB3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:63.9 nTPM
HPA Brain:191.8 nTPM
GTEx:63.9 nTPM
FANTOM5:225.3 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:20.0 nTPM
Allen mouse:2.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB020795
Glial cells Medium
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

191.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 118.7
1854 Male, age 80, left hemisphere 151.5
2481 Female, age 94, left hemisphere 142.1
1781 Male, age 74, unknown 136.5
2289 Male, age 61, right hemisphere 130.0
1857 Female, age 85, left hemisphere 110.2
2290 Female, age 72, unknown 99.8
2846 Female, age 79, unknown 98.1
2288 Male, age 75, left hemisphere 81.2
Globus pallidus, externus
nTPM: 191.8
2567 Female, age 72, unknown 229.4
1996 Male, age 80, right hemisphere 218.9
2395 Male, age 75, both hemispheres 177.1
2772 Female, age 79, unknown 166.8
2646 Male, age 61, right hemisphere 166.6
Globus pallidus, internus
nTPM: 176.5
2111 Female, age 85, right hemisphere 221.7
2037 Male, age 80, right hemisphere 218.5
1818 Male, age 74, unknown 206.5
2566 Female, age 72, unknown 180.4
2778 Female, age 91, both hemispheres 147.6
2287 Male, age 75, right hemisphere 135.1
2483 Female, age 94, right hemisphere 125.5
Nucleus accumbens
nTPM: 104.8
2732 Male, age 80, right hemisphere 150.2
1806 Female, age 85, left hemisphere 108.7
2698 Female, age 72, unknown 106.6
2391 Female, age 94, left hemisphere 105.4
1783 Male, age 74, unknown 100.0
1856 Female, age 91, right hemisphere 97.4
2824 Male, age 61, right hemisphere 88.2
2286 Male, age 75, left hemisphere 81.9
Nucleus basalis of Meynert
nTPM: 133.1
2569 Male, age 61, both hemispheres 174.1
2393 Male, age 80, right hemisphere 133.6
2484 Female, age 94, left hemisphere 116.8
2821 Male, age 75, both hemispheres 108.0
Nucleus of the diagonal band
nTPM: 122.1
1812 Female, age 91, both hemispheres 143.3
1979 Male, age 74, unknown 129.5
2029 Male, age 61, right hemisphere 120.1
2775 Male, age 80, right hemisphere 114.1
2195 Female, age 85, both hemispheres 103.6
Putamen
nTPM: 122.3
2489 Female, age 72, unknown 149.5
2647 Male, age 75, left hemisphere 138.7
2482 Female, age 94, left hemisphere 131.7
1829 Male, age 74, unknown 121.1
1838 Male, age 80, right hemisphere 118.5
2466 Female, age 79, unknown 104.3
1937 Female, age 91, right hemisphere 92.0
Septal nuclei
nTPM: 140.4
2199 Male, age 80, right hemisphere 179.5
2394 Male, age 61, left hemisphere 176.7
2059 Female, age 85, both hemispheres 136.7
2629 Female, age 94, right hemisphere 136.7
2009 Female, age 91, both hemispheres 133.8
1960 Male, age 74, unknown 117.8
2031 Female, age 72, unknown 101.5
Stria terminalis, bed nucleus
nTPM: 123.6
2201 Male, age 74, unknown 133.7
2486 Female, age 94, both hemispheres 125.0
1974 Female, age 91, both hemispheres 112.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.9
Samples: 246

Max nTPM: 214.5
Min nTPM: 19.0
Std nTPM: 26.8
Median nTPM: 58.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 214.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 179.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 164.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 123.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 122.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 121.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 115.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 114.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 113.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 112.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 111.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 110.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 108.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 107.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 103.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 102.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 101.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 101.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 100.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 100.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 98.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 97.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 95.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 95.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 94.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 94.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 94.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 93.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 93.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 92.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 90.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 89.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 89.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 89.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 88.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 88.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 88.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 88.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 87.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 87.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 87.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 87.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 86.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 85.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 85.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 85.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 85.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 84.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 84.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 84.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 82.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 82.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 81.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 81.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 80.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 80.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 78.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 78.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 77.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 76.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 76.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 76.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 75.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 75.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 74.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 74.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 73.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 73.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 73.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 72.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 72.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 72.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 71.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 71.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 71.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 70.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 69.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 69.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 69.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 68.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 68.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 67.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 65.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 64.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 63.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 63.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 63.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 61.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 61.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 60.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 59.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 59.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 58.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 58.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 58.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 57.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 57.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 56.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 56.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 56.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 56.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 55.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 55.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 54.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 54.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 54.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 54.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 54.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 54.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 53.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 52.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 51.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 51.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 51.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 50.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 50.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 48.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 48.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 47.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 46.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 46.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 45.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 44.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 43.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 43.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 43.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 43.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 42.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 41.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 41.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 41.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 41.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 40.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 40.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 40.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 39.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 38.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 38.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 37.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 37.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 37.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 36.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 35.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 35.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 34.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 34.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 34.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 33.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 30.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 30.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 30.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 29.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 29.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 29.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 29.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 26.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 26.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 25.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 25.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 24.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 23.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 22.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 55.8
Samples: 246

Max nTPM: 177.9
Min nTPM: 16.0
Std nTPM: 25.1
Median nTPM: 48.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 177.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 159.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 149.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 140.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 130.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 128.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 127.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 126.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 118.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 115.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 112.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 110.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 107.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 106.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 103.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 98.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 97.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 95.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 94.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 94.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 92.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 88.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 88.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 87.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 86.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 84.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 84.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 83.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 82.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 82.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 81.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 81.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 80.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 80.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 79.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 79.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 76.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 75.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 74.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 74.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 74.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 74.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 74.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 73.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 73.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 71.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 71.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 70.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 70.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 70.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 69.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 68.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 68.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 68.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 67.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 66.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 66.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 65.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 65.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 64.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 64.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 64.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 64.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 63.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 62.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 61.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 61.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 61.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 61.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 60.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 60.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 60.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 59.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 59.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 58.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 58.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 58.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 57.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 57.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 57.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 57.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 56.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 56.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 55.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 55.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 55.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 55.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 54.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 53.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 53.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 53.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 53.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 52.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 50.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 50.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 50.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 49.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 49.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 49.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 49.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 49.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 48.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 48.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 48.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 48.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 48.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 48.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 48.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 47.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 47.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 47.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 47.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 47.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 47.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 47.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 46.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 46.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 46.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 46.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 46.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 46.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 45.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 45.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 45.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 44.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 44.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 44.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 44.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 43.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 43.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 43.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 43.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 43.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 43.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 43.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 43.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 43.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 42.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 42.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 42.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 42.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 41.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 41.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 41.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 41.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 40.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 40.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 40.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 40.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 40.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 39.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 39.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 39.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 38.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 38.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 38.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 38.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 37.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 37.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 36.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 36.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 36.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 36.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 36.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 35.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 34.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 34.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 34.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 34.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 34.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 34.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 34.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 33.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 33.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 33.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 33.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 33.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 32.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 32.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 32.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 32.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 32.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 32.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 32.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 32.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 31.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 31.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 31.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 31.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 31.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 31.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 30.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 30.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 29.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 28.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 27.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 27.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 27.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 27.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 26.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 25.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 23.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 16.0
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Brain - Putamen (basal ganglia)
Average nTPM: 60.7
Samples: 205

Max nTPM: 217.2
Min nTPM: 18.0
Std nTPM: 26.0
Median nTPM: 54.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 217.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 137.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 124.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 121.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 117.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 117.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 111.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 109.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 108.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 108.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 106.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 106.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 101.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 100.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 99.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 97.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 96.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 95.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 94.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 93.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 93.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 91.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 90.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 89.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 89.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 89.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 89.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 87.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 87.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 86.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 85.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 84.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 83.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 83.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 83.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 82.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 82.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 82.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 82.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 80.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 79.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 79.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 79.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 77.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 77.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 75.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 74.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 74.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 74.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 73.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 73.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 73.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 73.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 73.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 72.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 72.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 71.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 71.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 71.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 70.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 70.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 70.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 68.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 67.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 67.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 66.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 65.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 65.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 65.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 63.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 63.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 63.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 62.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 60.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 60.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 60.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 59.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 59.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 59.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 59.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 57.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 56.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 54.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 54.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 54.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 54.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 54.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 53.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 53.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 52.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 52.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 52.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 51.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 51.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 51.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 50.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 50.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 50.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 49.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 49.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 49.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 49.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 49.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 49.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 48.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 48.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 47.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 47.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 47.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 46.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 46.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 45.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 45.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 45.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 43.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 43.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 43.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 43.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 42.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 42.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 41.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 41.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 41.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 41.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 40.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 39.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 39.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 39.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 38.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 38.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 38.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 37.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 37.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 36.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 36.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 36.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 36.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 36.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 35.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 35.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 35.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 35.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 33.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 33.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 32.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 31.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 31.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 29.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 28.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 26.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 26.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 26.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 25.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 23.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 23.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 23.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 22.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 21.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 21.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 20.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 20.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 18.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

225.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 122.1
FF:10164-103B2 76 years, female 122.1
Nucleus accumbens
Scaled Tags Per Million: 122.9
FF:10037-101F1 23-56 years, mixed 122.9
Putamen
Scaled Tags Per Million: 142.9
FF:10176-103C5 60 years, female 142.9
Globus pallidus
Scaled Tags Per Million: 225.3
FF:10175-103C4 60 years, female 268.3
FF:10161-103A8 76 years, female 182.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.8
Pig sample Sample description nTPM
Caudate
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.4
Sample A Female 11.4
Sample B Female 15.0
Sample C Male 17.0
Sample D Male 17.1
Putamen
nTPM: 19.8
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.3
Sample A Female 16.3
Sample B Female 18.6
Sample C Male 22.2
Sample D Male 22.1
Septum
nTPM: 13.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 12.4
Sample A Female 12.9
Sample B Female 12.4
Sample C Male 16.7
Sample D Male 12.7
Ventral pallidum
nTPM: 15.1
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.2
Sample A Female 15.7
Sample B Female 12.2
Sample C Male 17.0
Sample D Male 15.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.0
Samples: 4

Max nTPM: 22.3
Min nTPM: 16.7
Sample A Male 16.7
Sample B Male 20.4
Sample C Female 22.3
Sample D Female 20.6
Septum
nTPM: 13.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 12.7
Sample C Female 13.5
Sample D Female 13.9
Ventral forebrain
nTPM: 13.5
Samples: 4

Max nTPM: 15.7
Min nTPM: 10.8
Sample A Male 10.8
Sample B Male 15.7
Sample C Female 12.7
Sample D Female 14.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.8
74657950 Antisense, RP_060220_02_F11, Mouse strain C57BL/6J (56 days, male) 3.1
69838358 Antisense, RP_050301_02_E09, Mouse strain C57BL/6J (56 days, male) 2.5
Pallidum
Expression energy: 1.9
74657950 Antisense, RP_060220_02_F11, Mouse strain C57BL/6J (56 days, male) 2.6
69838358 Antisense, RP_050301_02_E09, Mouse strain C57BL/6J (56 days, male) 1.1

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