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ARL6IP1
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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:306.4 nTPM
GTEx:306.4 nTPM
FANTOM5:262.6 Scaled Tags Per Million
Mouse:374.1 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

306.4
GTEx sample id Sample description nTPM
Retina
Average nTPM: 306.4
Samples: 105

Max nTPM: 491.4
Min nTPM: 180.4
Std nTPM: 71.3
Median nTPM:
162_1 79 years, female 491.4
43_1 64 years, female 488.4
35_1 74 years, female 468.0
142_1 61 years, female 454.6
149_1 88 years, male 448.8
126_1 63 years, male 438.5
490_1 67 years, female 437.1
491_1 89 years, female 415.9
415_1 77 years, female 410.7
466_1 57 years, female 410.3
81_1 67 years, male 404.1
32_1 67 years, male 399.7
139_1 64 years, female 391.0
495_1 57 years, female 385.8
518_1 75 years, female 385.4
6_1 73 years, female 382.3
413_1 59 years, female 381.0
153_1 70 years, female 380.6
217_1 76 years, male 379.1
137_1 83 years, male 374.0
9_1 66 years, female 371.0
324_1 76 years, male 370.4
2_1 77 years, female 369.1
145_1 84 years, male 366.3
18_1 88 years, male 366.0
117_1 61 years, male 366.0
89_1 63 years, male 365.4
17_1 71 years, male 358.4
316_1 62 years, male 356.0
499_1 55 years, female 353.2
322_1 76 years, male 352.4
375_1 74 years, female 348.1
501_1 88 years, male 347.3
42_1 85 years, male 345.6
4_1 88 years, female 333.5
115_1 83 years, male 330.4
99_1 64 years, male 328.6
414_1 84 years, female 327.6
109_1 81 years, female 326.7
315_1 62 years, female 325.4
266_1 85 years, male 324.6
237_1 82 years, male 324.0
468_1 89 years, male 314.9
389_1 86 years, female 308.6
119_1 70 years, female 308.1
120_1 70 years, female 306.5
480_1 63 years, male 304.8
405_1 91 years, male 301.2
526_1 61 years, male 299.4
311_1 78 years, male 290.1
396_1 62 years, male 288.3
265_1 87 years, male 286.9
319_1 81 years, male 286.7
251_1 78 years, male 285.0
335_1 73 years, female 284.8
313_1 79 years, female 283.3
377_1 82 years, female 283.3
348_1 84 years, male 282.7
229_1 69 years, female 282.0
246_1 77 years, male 279.7
318_1 68 years, male 278.2
404_1 82 years, female 277.8
352_1 62 years, male 277.4
386_1 76 years, male 276.5
379_1 60 years, male 273.8
286_1 68 years, female 270.7
321_1 62 years, female 269.8
347_1 72 years, male 269.3
307_1 66 years, female 268.8
189_1 76 years, male 268.1
447_1 81 years, male 267.5
288_1 66 years, female 266.6
355_1 70 years, female 264.9
320_1 89 years, female 263.3
517_1 88 years, male 262.0
292_1 71 years, male 261.8
406_1 79 years, male 256.9
354_1 81 years, female 256.7
503_1 68 years, male 255.6
376_1 75 years, female 254.9
243_1 75 years, male 249.9
173_1 67 years, male 248.8
291_1 76 years, male 246.3
314_1 67 years, male 245.9
384_1 83 years, male 242.9
254_1 77 years, female 240.2
506_1 65 years, male 237.6
425_1 59 years, female 235.4
350_1 84 years, female 233.7
293_1 68 years, female 232.7
394_1 75 years, female 230.0
264_1 73 years, female 225.7
317_1 60 years, male 224.9
172_1 72 years, female 222.3
356_1 87 years, female 219.1
41_1 94 years, female 217.5
353_1 82 years, female 215.1
218_1 71 years, female 213.9
177_1 74 years, male 212.3
308_1 70 years, female 209.7
295_1 61 years, female 205.1
349_1 83 years, male 204.1
351_1 91 years, male 195.3
452_1 88 years, female 181.7
163_1 78 years, male 180.4
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

262.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 262.6
FF:10030-101E3 24-65 years, mixed 262.6

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

374.1
Mouse sample Sample description nTPM
Retina
nTPM: 374.1
Samples: 4

Max nTPM: 402.5
Min nTPM: 333.1
Sample A Male 395.4
Sample B Male 333.1
Sample C Female 402.5
Sample D Female 365.3

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