HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.6 nTPM
HPA Brain:64.8 nTPM
GTEx:15.6 nTPM
FANTOM5:39.0 Scaled Tags Per Million
Pig:63.0 nTPM
Mouse:73.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058574Antibody CAB000141Antibody CAB018580Antibody CAB078686
Glial cells Not detectedNot detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLowNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 64.8
Sample id Sample description nTPM
Hippocampus
nTPM: 51.8
1855 Male, age 76, left hemisphere 57.4
2148 Female, age 91, left hemisphere 56.8
1898 Male, age 80, left hemisphere 53.6
2621 Female, age 67, right hemisphere 49.3
2529 Female, age 94, left hemisphere 48.9
1911 Female, age 85, right hemisphere 44.5
Dentate gyrus
nTPM: 51.3
1927 Female, age 91, both hemispheres 56.1
2010 Male, age 76, both hemispheres 54.3
2246 Female, age 85, both hemispheres 54.3
2528 Male, age 74, both hemispheres 54.0
2531 Female, age 67, both hemispheres 47.1
2530 Female, age 94, left hemisphere 42.1
Entorhinal gyrus
nTPM: 54.4
1938 Female, age 85, left hemisphere 62.1
2764 Male, age 80, right hemisphere 58.0
2613 Female, age 94, left hemisphere 56.9
1787 Male, age 76, left hemisphere 55.5
2117 Female, age 91, right hemisphere 47.0
2686 Male, age 75, right hemisphere 46.8
Hippocampus, CA1
nTPM: 59.3
2749 Male, age 80, left hemisphere 63.0
2045 Male, age 76, both hemispheres 60.3
2527 Male, age 74, both hemispheres 58.2
1873 Female, age 85, both hemispheres 57.9
2082 Female, age 91, right hemisphere 57.2
Hippocampus, CA2
nTPM: 50.9
1963 Male, age 80, left hemisphere 56.6
2113 Female, age 91, right hemisphere 54.7
2249 Male, age 74, both hemispheres 53.6
1940 Female, age 85, left hemisphere 53.1
1892 Male, age 76, both hemispheres 48.1
2437 Female, age 94, left hemisphere 39.4
Hippocampus, CA3
nTPM: 46.4
2137 Male, age 80, left hemisphere 54.3
2861 Female, age 67, both hemispheres 49.4
2620 Female, age 94, left hemisphere 47.0
2436 Male, age 74, both hemispheres 45.9
1891 Female, age 85, both hemispheres 44.4
1867 Male, age 76, both hemispheres 37.1
Parahippocampal cortex
nTPM: 53.6
1850 Male, age 80, both hemispheres 69.6
1933 Female, age 85, both hemispheres 60.0
1990 Female, age 91, right hemisphere 55.3
2245 Female, age 91, both hemispheres 52.4
2692 Male, age 74, both hemispheres 52.0
2622 Female, age 67, right hemisphere 51.4
2532 Female, age 72, left hemisphere 49.7
2250 Female, age 67, right hemisphere 49.4
2693 Female, age 94, both hemispheres 49.0
2018 Male, age 76, both hemispheres 47.2
Perirhinal gyrus
nTPM: 64.8
1847 Female, age 91, left hemisphere 70.5
1794 Male, age 80, right hemisphere 68.5
1841 Female, age 85, right hemisphere 65.9
2848 Male, age 76, right hemisphere 60.0
2521 Female, age 94, right hemisphere 59.0
Subiculum
nTPM: 48.6
1977 Female, age 85, both hemispheres 58.6
2729 Female, age 91, right hemisphere 55.1
2619 Male, age 74, both hemispheres 52.3
2438 Female, age 94, left hemisphere 47.6
1901 Male, age 80, both hemispheres 39.8
2042 Male, age 76, both hemispheres 38.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 35.6
Min nTPM: 7.0
Std nTPM: 3.9
Median nTPM: 15.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 35.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.4
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 25.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 24.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 23.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 22.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 22.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 22.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 22.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 39.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.0
FF:10153-102I9 76 years, female 52.1
FF:10169-103B7 60 years, female 25.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 63.0
Pig sample Sample description nTPM
Subiculum
nTPM: 63.0
Samples: 4

Max nTPM: 69.1
Min nTPM: 57.5
Sample A Female 69.1
Sample B Female 62.3
Sample C Male 63.1
Sample D Male 57.5
Dorsal hippocampus
nTPM: 51.5
Samples: 4

Max nTPM: 58.9
Min nTPM: 42.1
Sample A Female 58.9
Sample B Female 56.8
Sample C Male 48.1
Sample D Male 42.1
Entorhinal cortex
nTPM: 51.3
Samples: 4

Max nTPM: 60.8
Min nTPM: 46.2
Sample A Female 50.1
Sample B Female 46.2
Sample C Male 60.8
Sample D Male 47.9
Ventral hippocampus
nTPM: 54.6
Samples: 4

Max nTPM: 59.6
Min nTPM: 45.7
Sample A Female 54.9
Sample B Female 45.7
Sample C Male 59.6
Sample D Male 58.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 73.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.0
Samples: 4

Max nTPM: 97.0
Min nTPM: 63.4
Sample A Male 63.4
Sample B Male 65.2
Sample C Female 66.5
Sample D Female 97.0
Hippocampal formation
nTPM: 61.4
Samples: 4

Max nTPM: 64.2
Min nTPM: 57.7
Sample A Male 61.2
Sample B Male 62.5
Sample C Female 64.2
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
79632275 Antisense, RP_071204_01_B10, Mouse strain C57BL/6J (56 days, male) 10.8
79556666 Antisense, RP_071204_01_B10, Mouse strain C57BL/6J (56 days, male) 9.7
237 Antisense, RP_Baylor_102676, Mouse strain C57BL/6J (56 days, male) 3.9
236 Antisense, RP_Baylor_102676, Mouse strain C57BL/6J (56 days, male) 2.6

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