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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:286.3 nTPM
HPA Brain:27.5 nTPM
GTEx:286.3 nTPM
Mouse:215.3 nTPM
Allen mouse:0.3 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 22.2
1961 Female, age 42, unknown 29.5
2226 Male, age 75, left hemisphere 14.8
Dorsomedial nucleus
nTPM: 25.9
2017 Female, age 42, unknown 28.8
1989 Male, age 62, unknown 27.3
2041 Female, age 72, unknown 21.5
Lateral hypothalamic area
nTPM: 16.2
1791 Male, age 80, right hemisphere 18.7
2412 Male, age 62, unknown 17.4
2228 Male, age 66, unknown 17.3
2271 Male, age 75, both hemispheres 11.4
Mammillary body
nTPM: 18.1
1945 Male, age 80, right hemisphere 25.6
2413 Male, age 66, unknown 23.6
1834 Female, age 42, unknown 17.2
1948 Female, age 72, unknown 12.9
1923 Female, age 72, unknown 10.9
Paraventricular nucleus
nTPM: 23.8
2700 Male, age 62, unknown 23.8
Preoptic area
nTPM: 20.4
2414 Female, age 72, unknown 24.3
1907 Male, age 80, right hemisphere 20.6
1861 Female, age 42, unknown 16.2
Supraoptic nucleus
nTPM: 18.0
1894 Female, age 72, unknown 19.9
2835 Female, age 72, unknown 18.0
2043 Male, age 62, unknown 16.3
Ventromedial nucleus
nTPM: 27.5
1822 Female, age 42, unknown 31.2
1982 Female, age 72, unknown 23.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 286.3
Samples: 202

Max nTPM: 736.2
Min nTPM: 53.6
Std nTPM: 102.3
Median nTPM: 264.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 736.2
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 692.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 681.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 599.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 593.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 546.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 527.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 503.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 486.0
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 463.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 447.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 444.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 426.9
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 426.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 425.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 423.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 421.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 421.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 411.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 404.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 404.2
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 401.5
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 395.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 393.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 391.7
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 390.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 390.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 387.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 385.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 379.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 376.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 375.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 368.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 366.7
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 366.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 365.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 363.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 362.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 357.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 357.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 354.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 353.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 353.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 353.2
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 352.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 351.0
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 345.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 344.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 341.5
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 338.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 338.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 335.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 333.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 332.3
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 329.8
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 324.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 322.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 322.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 322.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 321.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 318.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 318.0
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 317.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 316.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 314.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 311.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 309.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 307.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 307.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 305.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 304.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 304.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 304.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 301.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 301.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 300.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 294.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 293.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 291.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 291.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 288.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 288.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 287.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 286.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 283.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 282.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 280.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 279.8
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 278.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 277.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 276.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 274.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 274.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 271.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 271.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 270.2
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 269.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 267.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 266.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 264.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 264.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 264.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 264.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 263.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 263.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 263.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 263.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 262.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 261.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 260.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 259.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 258.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 257.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 257.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 256.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 249.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 247.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 246.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 246.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 245.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 245.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 244.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 244.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 244.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 243.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 243.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 242.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 241.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 241.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 241.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 240.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 236.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 235.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 235.0
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 233.6
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 232.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 232.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 232.4
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 230.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 230.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 230.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 230.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 230.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 229.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 228.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 226.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 226.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 226.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 226.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 225.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 224.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 222.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 221.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 219.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 219.7
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 219.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 218.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 218.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 217.3
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 215.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 214.5
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 212.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 210.7
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 209.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 206.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 206.0
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 204.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 204.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 200.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 200.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 200.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 198.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 197.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 196.6
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 193.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 190.7
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 190.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 190.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 187.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 185.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 184.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 182.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 180.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 179.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 178.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 177.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 176.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 174.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 171.5
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 170.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 164.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 162.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 162.2
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 161.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 153.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 150.5
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 131.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 129.2
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 117.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 91.4
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 89.5
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 53.6
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

215.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 215.3
Samples: 4

Max nTPM: 231.8
Min nTPM: 204.8
Sample A Male 205.0
Sample B Male 231.8
Sample C Female 204.8
Sample D Female 219.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.3
73716566 Antisense, RP_051206_03_C11, Mouse strain C57BL/6J (56 days, male) 0.3

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