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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:184.9 nTPM
HPA Brain:144.0 nTPM
GTEx:184.9 nTPM
FANTOM5:159.7 Scaled Tags Per Million
Mouse:118.4 nTPM
Allen mouse:3.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020725
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

144.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 118.8
1857 Female, age 85, left hemisphere 142.2
1781 Male, age 74, unknown 139.7
2290 Female, age 72, unknown 138.7
2846 Female, age 79, unknown 134.6
1854 Male, age 80, left hemisphere 118.5
2288 Male, age 75, left hemisphere 115.1
2289 Male, age 61, right hemisphere 84.6
2481 Female, age 94, left hemisphere 76.9
Globus pallidus, externus
nTPM: 93.9
1996 Male, age 80, right hemisphere 117.1
2772 Female, age 79, unknown 94.4
2395 Male, age 75, both hemispheres 93.5
2567 Female, age 72, unknown 89.0
2646 Male, age 61, right hemisphere 75.7
Globus pallidus, internus
nTPM: 85.3
2037 Male, age 80, right hemisphere 120.6
2287 Male, age 75, right hemisphere 92.3
2483 Female, age 94, right hemisphere 89.6
2566 Female, age 72, unknown 89.0
1818 Male, age 74, unknown 76.4
2778 Female, age 91, both hemispheres 74.9
2111 Female, age 85, right hemisphere 54.3
Nucleus accumbens
nTPM: 106.1
1806 Female, age 85, left hemisphere 133.6
2698 Female, age 72, unknown 131.4
1856 Female, age 91, right hemisphere 130.4
1783 Male, age 74, unknown 124.5
2286 Male, age 75, left hemisphere 111.3
2824 Male, age 61, right hemisphere 93.9
2391 Female, age 94, left hemisphere 66.4
2732 Male, age 80, right hemisphere 57.6
Nucleus basalis of Meynert
nTPM: 102.6
2821 Male, age 75, both hemispheres 127.7
2484 Female, age 94, left hemisphere 100.7
2393 Male, age 80, right hemisphere 95.7
2569 Male, age 61, both hemispheres 86.5
Nucleus of the diagonal band
nTPM: 144.0
2775 Male, age 80, right hemisphere 173.4
2029 Male, age 61, right hemisphere 165.7
1812 Female, age 91, both hemispheres 163.6
2195 Female, age 85, both hemispheres 148.0
1979 Male, age 74, unknown 69.3
Putamen
nTPM: 110.6
2647 Male, age 75, left hemisphere 149.0
1937 Female, age 91, right hemisphere 115.5
1838 Male, age 80, right hemisphere 113.9
2466 Female, age 79, unknown 108.6
2489 Female, age 72, unknown 105.7
1829 Male, age 74, unknown 99.7
2482 Female, age 94, left hemisphere 82.0
Septal nuclei
nTPM: 119.7
2031 Female, age 72, unknown 162.9
1960 Male, age 74, unknown 155.3
2629 Female, age 94, right hemisphere 133.4
2009 Female, age 91, both hemispheres 120.2
2059 Female, age 85, both hemispheres 112.2
2199 Male, age 80, right hemisphere 76.9
2394 Male, age 61, left hemisphere 76.9
Stria terminalis, bed nucleus
nTPM: 109.1
1974 Female, age 91, both hemispheres 138.6
2486 Female, age 94, both hemispheres 109.8
2201 Male, age 74, unknown 78.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 161.3
Samples: 246

Max nTPM: 444.6
Min nTPM: 58.7
Std nTPM: 55.2
Median nTPM: 153.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 444.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 393.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 385.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 350.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 340.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 333.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 307.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 281.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 277.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 266.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 266.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 265.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 261.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 249.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 244.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 235.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 234.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 234.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 232.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 231.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 229.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 225.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 219.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 219.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 219.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 218.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 218.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 217.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 214.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 213.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 212.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 209.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 206.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 206.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 205.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 203.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 203.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 202.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 200.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 199.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 199.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 198.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 198.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 198.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 197.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 197.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 196.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 195.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 194.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 194.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 194.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 193.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 193.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 193.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 192.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 192.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 191.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 190.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 189.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 188.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 188.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 187.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 187.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 185.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 184.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 183.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 183.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 181.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 181.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 181.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 180.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 179.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 178.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 178.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 176.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 175.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 174.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 173.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 171.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 171.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 170.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 170.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 169.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 169.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 169.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 169.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 168.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 168.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 167.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 166.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 166.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 166.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 166.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 165.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 165.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 165.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 165.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 164.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 164.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 164.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 164.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 164.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 163.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 161.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 161.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 160.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 160.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 160.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 160.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 159.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 159.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 157.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 157.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 156.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 156.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 156.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 156.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 156.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 156.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 155.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 154.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 153.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 153.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 153.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 152.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 151.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 151.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 150.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 150.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 149.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 149.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 149.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 148.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 148.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 148.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 147.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 147.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 146.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 145.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 145.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 144.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 144.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 144.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 144.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 144.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 144.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 143.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 142.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 141.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 141.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 141.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 140.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 140.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 140.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 140.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 139.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 138.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 138.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 138.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 138.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 137.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 137.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 137.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 136.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 136.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 136.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 136.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 134.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 134.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 134.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 134.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 133.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 133.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 130.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 130.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 130.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 129.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 127.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 126.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 126.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 124.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 124.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 123.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 123.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 122.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 122.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 122.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 121.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 121.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 121.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 120.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 119.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 119.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 118.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 118.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 118.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 118.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 117.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 117.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 116.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 116.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 115.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 113.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 113.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 113.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 112.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 112.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 110.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 108.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 107.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 107.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 107.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 105.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 102.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 101.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 99.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 98.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 97.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 96.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 92.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 90.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 89.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 87.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 86.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 85.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 83.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 81.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 80.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 76.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 76.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 73.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 67.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 66.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 64.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 58.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 171.5
Samples: 246

Max nTPM: 402.7
Min nTPM: 47.9
Std nTPM: 60.0
Median nTPM: 160.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 402.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 392.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 381.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 372.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 343.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 318.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 318.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 310.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 289.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 287.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 284.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 282.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 277.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 266.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 264.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 262.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 261.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 261.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 259.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 257.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 254.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 253.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 252.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 247.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 245.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 245.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 245.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 244.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 244.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 243.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 242.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 235.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 235.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 234.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 233.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 232.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 228.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 228.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 225.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 225.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 223.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 223.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 223.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 221.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 219.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 218.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 217.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 216.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 215.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 215.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 214.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 213.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 212.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 211.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 211.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 210.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 210.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 208.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 207.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 207.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 206.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 206.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 205.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 205.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 205.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 202.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 202.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 201.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 200.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 200.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 199.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 198.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 198.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 197.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 196.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 196.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 195.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 193.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 191.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 190.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 188.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 188.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 188.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 187.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 186.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 185.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 183.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 182.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 182.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 181.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 181.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 179.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 178.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 177.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 176.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 176.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 176.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 175.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 175.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 174.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 174.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 173.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 173.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 173.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 172.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 171.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 171.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 171.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 170.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 170.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 169.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 167.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 167.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 167.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 165.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 165.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 165.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 164.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 164.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 162.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 161.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 161.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 161.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 160.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 159.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 159.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 159.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 158.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 157.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 157.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 157.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 157.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 155.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 155.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 154.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 154.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 153.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 153.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 153.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 153.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 152.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 152.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 152.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 152.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 151.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 151.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 151.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 150.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 149.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 149.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 148.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 146.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 145.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 145.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 145.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 144.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 144.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 144.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 144.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 143.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 143.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 143.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 142.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 141.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 141.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 140.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 140.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 139.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 139.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 139.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 139.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 138.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 138.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 138.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 138.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 138.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 137.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 136.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 136.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 136.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 135.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 135.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 135.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 133.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 132.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 131.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 129.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 129.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 128.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 127.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 127.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 127.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 127.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 126.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 123.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 123.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 123.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 123.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 122.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 120.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 119.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 118.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 117.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 117.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 116.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 116.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 115.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 115.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 115.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 114.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 114.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 114.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 113.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 111.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 110.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 109.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 109.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 109.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 108.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 106.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 105.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 103.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 103.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 100.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 99.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 99.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 99.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 97.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 96.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 96.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 94.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 94.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 93.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 92.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 91.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 91.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 88.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 85.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 72.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 67.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 65.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 63.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 50.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.9
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Brain - Putamen (basal ganglia)
Average nTPM: 184.9
Samples: 205

Max nTPM: 371.5
Min nTPM: 75.7
Std nTPM: 54.0
Median nTPM: 178.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 371.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 331.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 326.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 320.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 320.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 307.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 306.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 304.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 294.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 293.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 286.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 282.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 273.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 271.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 270.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 270.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 267.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 265.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 265.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 264.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 261.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 258.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 254.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 253.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 251.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 251.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 249.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 249.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 248.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 246.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 245.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 238.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 238.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 236.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 235.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 235.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 234.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 230.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 228.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 226.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 226.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 226.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 225.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 223.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 223.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 221.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 220.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 220.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 219.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 218.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 214.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 211.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 211.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 211.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 210.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 210.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 210.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 209.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 209.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 208.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 208.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 208.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 207.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 205.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 205.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 205.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 204.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 203.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 201.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 201.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 200.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 200.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 200.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 200.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 199.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 198.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 196.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 196.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 195.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 193.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 192.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 191.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 191.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 191.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 190.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 188.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 187.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 187.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 187.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 186.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 186.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 185.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 184.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 181.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 181.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 181.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 180.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 180.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 180.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 179.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 179.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 179.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 178.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 177.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 177.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 175.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 173.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 173.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 172.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 172.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 172.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 172.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 172.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 169.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 169.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 168.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 168.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 168.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 168.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 167.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 165.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 165.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 165.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 163.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 162.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 162.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 160.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 160.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 160.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 160.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 159.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 159.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 158.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 157.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 156.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 156.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 156.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 156.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 155.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 155.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 155.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 154.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 154.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 153.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 153.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 153.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 151.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 149.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 149.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 149.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 149.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 148.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 147.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 147.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 145.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 144.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 144.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 143.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 142.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 142.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 142.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 141.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 140.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 140.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 140.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 138.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 137.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 136.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 135.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 135.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 134.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 134.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 134.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 134.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 133.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 133.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 132.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 131.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 131.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 129.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 128.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 127.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 127.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 126.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 126.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 124.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 124.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 123.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 115.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 113.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 110.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 109.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 107.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 103.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 102.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 99.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 98.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 97.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 95.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 94.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 93.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 93.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 92.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 88.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 75.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

159.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 92.3
FF:10164-103B2 76 years, female 92.3
Nucleus accumbens
Scaled Tags Per Million: 159.7
FF:10037-101F1 23-56 years, mixed 159.7
Putamen
Scaled Tags Per Million: 118.6
FF:10176-103C5 60 years, female 118.6
Globus pallidus
Scaled Tags Per Million: 103.0
FF:10175-103C4 60 years, female 135.7
FF:10161-103A8 76 years, female 70.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 73.1
Samples: 4

Max nTPM: 87.1
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 87.1
Sample C Female 70.4
Sample D Female 73.3
Septum
nTPM: 83.3
Samples: 4

Max nTPM: 102.8
Min nTPM: 58.6
Sample A Male 102.8
Sample B Male 76.1
Sample C Female 95.6
Sample D Female 58.6
Ventral forebrain
nTPM: 118.4
Samples: 4

Max nTPM: 153.0
Min nTPM: 84.9
Sample A Male 135.5
Sample B Male 84.9
Sample C Female 153.0
Sample D Female 100.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.9
68631948 Antisense, RP_050125_01_D08, Mouse strain C57BL/6J (56 days, male) 5.0
71015816 Antisense, RP_050725_02_H12, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 3.2
68631948 Antisense, RP_050125_01_D08, Mouse strain C57BL/6J (56 days, male) 5.3
71015816 Antisense, RP_050725_02_H12, Mouse strain C57BL/6J (56 days, male) 1.1

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