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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Cytoplasmic staining in serous acini. Additional staining in small ducts.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:25265.8 nTPM
HPA:24645.0 nTPM
GTEx:25265.8 nTPM
FANTOM5:102344.6 Scaled Tags Per Million

SALIVARY GLAND - Multiplex stainingi

Antibody localization in the annotated cell types/states/structures of the current human tissue is reported as main/additional locations, percent overlap between the antibody and cell type/state/structure-specific markers, and, when applicable also subcellular localization. The scores are based on multiplex immunohistochemistry profiling in selected tissues.

Main locations are characterized by a high overlap between the antibody and the cell type/state-specific marker combined with strong antibody signal intensity, while additional locations are characterized by lower overlap and weaker antibody signal intensity.

The antibody of interest is reported in green, while cell types/states/structures are reported in various other colors, and DAPI (marks nucleus) is reported in blue. Colors can be toggled on and off by clicking on the name of the cell type/state of interest, “Antibody” or “DAPI”. To toggle between the different tissue samples, click on the miniature images at the right bottom corner of the main image. The miniature images appear upon hovering the mouse over that area.

- Antibody HPA006411
Main location Serous acini
Small ducts
Antibody overlap75%-51%
LocationCytoplasm
No antibody overlap
No antibody overlap
No antibody overlap
Antibody overlap75%-51%
LocationCytoplasm

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA006411
Glandular cells High


SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24645.0
overview
Female, age 68
Salivary gland sample 216
nTPM: 41118.4
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 32329.3
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 487.3
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25265.8
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 25265.8
Samples: 162

Max nTPM: 139255.7
Min nTPM: 0.0
Std nTPM: 28333.1
Median nTPM: 17523.9
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 139255.7
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 133023.7
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 130469.0
GTEX-15SHV-2226-SM-6M464 60-69 years, male 114756.5
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 112903.6
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 89671.6
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 89303.8
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 87650.9
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 75092.7
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 74655.1
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 74068.6
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 73458.5
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 71446.4
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 69732.6
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 68898.7
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 68143.9
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 66742.6
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 61562.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 58685.3
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 56937.3
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 56323.5
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 54800.3
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 53258.4
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 52155.7
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 50030.7
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 48891.5
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 47043.0
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 46587.5
GTEX-11P82-0926-SM-5986X 20-29 years, male 46247.0
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 44031.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 43664.3
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 43425.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 43340.8
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 38991.9
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 38630.3
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 38275.7
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 38095.7
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 37393.8
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 37036.2
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 36650.4
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 36214.7
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 35455.4
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 35352.7
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 34706.1
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 33719.3
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 32660.6
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 32096.9
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 31772.7
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 31702.0
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 31438.9
GTEX-1445S-2926-SM-5O993 60-69 years, male 31017.7
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 28943.7
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 28665.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 28524.6
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 28317.9
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 28254.5
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 28077.0
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 27552.8
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 27194.2
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 27147.2
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 26455.9
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 26108.6
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 22914.8
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 22855.8
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 22693.2
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 22672.5
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 20774.5
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 20562.1
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 20456.6
GTEX-Y111-2626-SM-4TT24 50-59 years, male 19840.0
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 19785.0
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 19781.1
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 18995.0
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 18989.9
GTEX-X261-2426-SM-4PQZU 50-59 years, male 18655.0
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 18427.3
GTEX-13O21-1926-SM-5MR39 50-59 years, male 18349.5
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 18322.3
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 18010.8
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 17785.1
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 17605.1
GTEX-WOFM-2126-SM-4OOSR 20-29 years, male 17442.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 16861.4
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 15737.1
GTEX-13113-1526-SM-5EGHV 60-69 years, female 15373.1
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 15345.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 14811.7
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 14625.6
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 14120.5
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 13940.1
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 13141.6
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 13067.8
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 11736.2
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 11698.5
GTEX-178AV-1426-SM-6LLID 40-49 years, male 10567.2
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 10128.2
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 9712.7
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 9480.0
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 9331.2
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 9254.2
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 8330.0
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 8292.5
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 8123.0
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 7788.1
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 7084.7
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 6970.7
GTEX-1R9PM-1726-SM-E8VOA 20-29 years, male 6734.9
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 6586.1
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 6146.7
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 6023.6
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 5687.6
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 5634.5
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 5555.4
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 5275.9
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 5258.1
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 5098.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 4987.0
GTEX-146FR-1226-SM-5SIA7 60-69 years, female 4920.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 4906.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 4852.6
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 4647.8
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 4624.7
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 4250.2
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 3786.5
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 3689.2
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 3410.8
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 3311.4
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 2904.7
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 2817.8
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2674.7
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 2109.8
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1878.5
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1847.6
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1812.4
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1617.8
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1560.3
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1541.6
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 1523.9
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1419.5
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1403.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1376.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1368.8
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1314.0
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 960.7
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 957.7
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 942.7
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 764.5
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 692.9
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 382.8
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 275.7
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 139.8
GTEX-ZQG8-2126-SM-4YCF1 60-69 years, female 122.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 62.6
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 23.4
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 10.4
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 4.2
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2.7
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 0.9
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 0.8
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 0.2
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 0.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 0.0
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

102344.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 593.8
FF:10199-103F1 23 years, male 593.8
Salivary gland
Scaled Tags Per Million: 102344.6
FF:10093-102C3 16-60 years, mixed 102344.6
Submaxillary gland
Scaled Tags Per Million: 78815.2
FF:10202-103F4 24 years, male 78815.2

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