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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:177.9 nTPM
HPA:174.4 nTPM
GTEx:177.9 nTPM
FANTOM5:53.5 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042528
Cholangiocytes Not detected
Hepatocytes Low



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.4
N/A
Female, age 60
Liver sample 21
nTPM: 183.6
overview
Male, age 54
Liver sample 23
nTPM: 122.9
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 172.4
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 161.1
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 188
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 165
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 155.9
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 181.2
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 138.1
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 276
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.9
GTEx sample id Sample description nTPM
Liver
Average nTPM: 177.9
Samples: 226

Max nTPM: 383.9
Min nTPM: 68.9
Std nTPM: 62.0
Median nTPM: 171.6
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 383.9
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 381.6
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 365.9
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 363.4
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 350.4
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 340.5
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 322.5
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 320.3
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 307.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 293.3
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 291.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 291.1
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 291.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 279.4
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 278.4
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 278.0
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 272.8
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 271.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 267.3
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 264.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 255.7
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 252.6
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 250.7
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 250.3
GTEX-R53T-0326-SM-48FEC 50-59 years, female 248.9
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 246.7
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 245.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 243.1
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 243.1
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 243.0
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 242.6
GTEX-S32W-1926-SM-4AD63 50-59 years, female 240.5
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 239.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 238.8
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 237.4
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 237.0
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 236.9
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 235.9
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 234.6
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 234.3
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 233.9
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 233.0
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 232.8
GTEX-QEL4-1226-SM-447A4 50-59 years, male 231.8
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 231.8
GTEX-REY6-1226-SM-48FDR 60-69 years, male 229.7
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 227.1
GTEX-13113-1326-SM-5GCOI 60-69 years, female 226.4
GTEX-QESD-2026-SM-447BI 20-29 years, male 224.4
GTEX-14PHX-0526-SM-664NW 50-59 years, male 223.9
GTEX-17HHE-0126-SM-79398 50-59 years, male 223.5
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 223.3
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 223.0
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 222.5
GTEX-14PJO-1726-SM-68719 60-69 years, male 221.7
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 221.0
GTEX-P78B-1326-SM-3P611 40-49 years, female 220.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 218.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 218.3
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 217.9
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 217.5
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 215.6
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 215.0
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 215.0
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 214.3
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 212.1
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 211.8
GTEX-14XAO-0226-SM-68728 60-69 years, female 208.6
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 204.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 201.7
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 201.0
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 200.7
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 200.3
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 198.3
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 198.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 197.9
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 197.3
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 195.6
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 194.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 193.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 192.0
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 191.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 191.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 191.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 191.5
GTEX-18A66-2026-SM-7189C 60-69 years, male 189.1
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 187.8
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 187.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 187.0
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 184.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 184.7
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 183.9
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 183.5
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 182.9
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 182.8
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 182.8
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 182.4
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 182.1
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 181.0
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 179.5
GTEX-O5YV-0726-SM-EV798 60-69 years, female 179.5
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 179.4
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 178.6
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 178.5
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 176.6
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 176.1
GTEX-1B932-1426-SM-793AN 40-49 years, female 175.2
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 175.0
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 174.4
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 174.2
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 174.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 173.2
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 172.3
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 170.9
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 168.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 167.5
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 166.9
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 163.3
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 162.8
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 162.7
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 162.5
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 161.3
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 160.9
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 160.7
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 159.9
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 159.0
GTEX-12696-0826-SM-5EGGE 60-69 years, male 158.0
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 154.5
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 154.1
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 153.2
GTEX-Q734-0326-SM-48U15 40-49 years, female 153.1
GTEX-18A7A-1526-SM-72D69 50-59 years, female 152.3
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 152.0
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 152.0
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 151.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 150.7
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 150.6
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 150.6
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 150.3
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 149.6
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 148.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 146.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 146.3
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 146.2
GTEX-1399T-0826-SM-5IFES 60-69 years, male 145.7
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 145.4
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 144.6
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 144.6
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 144.4
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 144.0
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 143.7
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 142.7
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 142.6
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 141.0
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 140.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 140.6
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 140.2
GTEX-14JG1-1626-SM-664NH 40-49 years, male 139.9
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 139.7
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 139.6
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 138.4
GTEX-14E7W-1526-SM-6871X 70-79 years, male 138.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 136.5
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 134.5
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 134.3
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 131.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 130.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 129.6
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 129.5
GTEX-X261-1726-SM-4PQYT 50-59 years, male 129.4
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 129.1
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 128.7
GTEX-17F96-1226-SM-79OK2 70-79 years, male 128.7
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 128.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 127.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 127.4
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 127.2
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 125.8
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 125.0
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 123.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 122.7
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 122.4
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 121.5
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 119.2
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 119.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 117.9
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 117.8
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 117.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 117.4
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 116.8
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 116.7
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 116.4
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 115.6
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 114.4
GTEX-S33H-1626-SM-4AD68 30-39 years, male 114.0
GTEX-YECK-1926-SM-4W21H 60-69 years, male 113.9
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 113.1
GTEX-1B933-1226-SM-731DW 50-59 years, female 112.8
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 112.7
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 111.4
GTEX-13112-1426-SM-5EGH8 50-59 years, male 110.6
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 109.7
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 107.5
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 105.4
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 105.1
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 104.4
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 103.3
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 100.2
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 99.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 99.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 98.7
GTEX-144GL-1426-SM-79OMA 50-59 years, male 98.6
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 97.6
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 97.0
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 96.6
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 96.3
GTEX-18465-1626-SM-7LG6N 50-59 years, male 94.7
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 89.0
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 87.2
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 87.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 85.0
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 84.2
GTEX-RN64-1826-SM-48FDV 50-59 years, male 83.1
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 78.3
GTEX-11GSP-0626-SM-5986T 60-69 years, female 78.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 68.9
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 53.5
FF:10018-101C9 64,69,70 years, mixed 53.5

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