HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.7 nTPM
HPA Brain:91.5 nTPM
GTEx:36.7 nTPM
FANTOM5:52.9 Scaled Tags Per Million
Pig:136.2 nTPM
Mouse:76.3 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.5
Sample id Sample description nTPM
Hippocampus
nTPM: 75.5
2621 Female, age 67, right hemisphere 100.8
2148 Female, age 91, left hemisphere 86.4
1911 Female, age 85, right hemisphere 76.9
1898 Male, age 80, left hemisphere 76.7
1855 Male, age 76, left hemisphere 57.9
2529 Female, age 94, left hemisphere 54.5
Dentate gyrus
nTPM: 80.8
1927 Female, age 91, both hemispheres 109.0
2531 Female, age 67, both hemispheres 96.1
2530 Female, age 94, left hemisphere 77.0
2528 Male, age 74, both hemispheres 76.8
2246 Female, age 85, both hemispheres 63.8
2010 Male, age 76, both hemispheres 62.2
Entorhinal gyrus
nTPM: 91.5
2613 Female, age 94, left hemisphere 156.1
2764 Male, age 80, right hemisphere 98.2
1938 Female, age 85, left hemisphere 85.9
2686 Male, age 75, right hemisphere 80.9
1787 Male, age 76, left hemisphere 79.6
2117 Female, age 91, right hemisphere 48.2
Hippocampus, CA1
nTPM: 86.0
2749 Male, age 80, left hemisphere 152.6
2527 Male, age 74, both hemispheres 90.5
1873 Female, age 85, both hemispheres 74.5
2045 Male, age 76, both hemispheres 67.2
2082 Female, age 91, right hemisphere 45.4
Hippocampus, CA2
nTPM: 74.4
2437 Female, age 94, left hemisphere 87.5
1963 Male, age 80, left hemisphere 86.2
1892 Male, age 76, both hemispheres 83.4
2249 Male, age 74, both hemispheres 78.3
1940 Female, age 85, left hemisphere 60.6
2113 Female, age 91, right hemisphere 50.3
Hippocampus, CA3
nTPM: 82.5
2137 Male, age 80, left hemisphere 105.1
2620 Female, age 94, left hemisphere 98.8
2861 Female, age 67, both hemispheres 98.0
1867 Male, age 76, both hemispheres 73.9
2436 Male, age 74, both hemispheres 64.7
1891 Female, age 85, both hemispheres 54.4
Parahippocampal cortex
nTPM: 88.2
2245 Female, age 91, both hemispheres 120.6
2250 Female, age 67, right hemisphere 108.3
2622 Female, age 67, right hemisphere 104.7
1990 Female, age 91, right hemisphere 96.1
2693 Female, age 94, both hemispheres 92.4
1933 Female, age 85, both hemispheres 85.3
2532 Female, age 72, left hemisphere 78.0
1850 Male, age 80, both hemispheres 72.9
2692 Male, age 74, both hemispheres 72.2
2018 Male, age 76, both hemispheres 51.7
Perirhinal gyrus
nTPM: 90.6
1847 Female, age 91, left hemisphere 118.1
2521 Female, age 94, right hemisphere 107.0
1794 Male, age 80, right hemisphere 84.1
1841 Female, age 85, right hemisphere 79.2
2848 Male, age 76, right hemisphere 64.6
Subiculum
nTPM: 69.2
2438 Female, age 94, left hemisphere 84.5
2619 Male, age 74, both hemispheres 83.1
1977 Female, age 85, both hemispheres 75.2
1901 Male, age 80, both hemispheres 73.0
2042 Male, age 76, both hemispheres 50.0
2729 Female, age 91, right hemisphere 49.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 124.1
Min nTPM: 0.6
Std nTPM: 25.7
Median nTPM: 33.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 124.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 105.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 102.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 100.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 96.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 90.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 90.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 84.1
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 84.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 82.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 52.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.9
FF:10169-103B7 60 years, female 64.3
FF:10153-102I9 76 years, female 41.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 136.2
Pig sample Sample description nTPM
Subiculum
nTPM: 108.0
Samples: 4

Max nTPM: 155.0
Min nTPM: 89.2
Sample A Female 155.0
Sample B Female 93.2
Sample C Male 89.2
Sample D Male 94.4
Dorsal hippocampus
nTPM: 87.6
Samples: 4

Max nTPM: 105.2
Min nTPM: 74.7
Sample A Female 105.2
Sample B Female 82.5
Sample C Male 74.7
Sample D Male 88.1
Entorhinal cortex
nTPM: 136.2
Samples: 4

Max nTPM: 166.9
Min nTPM: 112.4
Sample A Female 138.0
Sample B Female 127.4
Sample C Male 166.9
Sample D Male 112.4
Ventral hippocampus
nTPM: 67.0
Samples: 4

Max nTPM: 83.4
Min nTPM: 49.0
Sample A Female 49.0
Sample B Female 55.4
Sample C Male 80.1
Sample D Male 83.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 76.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.3
Samples: 4

Max nTPM: 86.7
Min nTPM: 68.0
Sample A Male 78.5
Sample B Male 86.7
Sample C Female 68.0
Sample D Female 72.0
Hippocampal formation
nTPM: 55.7
Samples: 4

Max nTPM: 60.1
Min nTPM: 53.4
Sample A Male 55.4
Sample B Male 53.4
Sample C Female 60.1
Sample D Female 53.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
70812811 Antisense, RP_050712_02_F07, Mouse strain C57BL/6J (56 days, male) 11.0

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