PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:304.2 nTPM
FANTOM5:552.1 Scaled Tags Per Million
Pig:250.2 nTPM
Mouse:214.9 nTPM
Allen mouse:18.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 304.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 171.6
1984 Male, age 76, both hemispheres 205.0
2188 Female, age 91, both hemispheres 172.6
2301 Female, age 85, both hemispheres 171.2
2090 Male, age 80, both hemispheres 137.7
Area postrema
nTPM: 139.4
2054 Male, age 76, both hemispheres 148.7
2799 Male, age 61, both hemispheres 146.3
2306 Male, age 80, both hemispheres 123.3
Dorsal cochlear nucleus
nTPM: 168.4
2187 Female, age 91, both hemispheres 191.7
2802 Male, age 74, right hemisphere 180.6
2370 Male, age 61, both hemispheres 176.5
2058 Male, age 76, both hemispheres 152.7
2378 Male, age 80, both hemispheres 140.3
Dorsal medullary reticular nucleus
nTPM: 185.1
2040 Female, age 85, both hemispheres 240.5
2373 Male, age 61, both hemispheres 158.2
2088 Male, age 76, both hemispheres 156.7
Dorsal motor vagal complex
nTPM: 181.6
2000 Male, age 74, unknown 226.3
2133 Female, age 91, both hemispheres 220.3
2844 Male, age 55, unknown 208.0
2813 Female, age 72, unknown 188.3
2643 Male, age 74, both hemispheres 185.6
2797 Male, age 61, both hemispheres 178.7
2185 Male, age 76, both hemispheres 143.1
2807 Female, age 85, both hemispheres 102.6
Dorsal tegmental nucleus
nTPM: 181.7
2083 Male, age 80, both hemispheres 214.4
2326 Male, age 74, both hemispheres 186.7
1936 Male, age 76, left hemisphere 167.3
2358 Male, age 61, both hemispheres 158.5
Dorsolateral tegmental area
nTPM: 186.0
2360 Male, age 74, both hemispheres 216.6
2654 Male, age 80, both hemispheres 208.5
2141 Male, age 76, both hemispheres 206.5
2751 Female, age 85, both hemispheres 186.4
2337 Male, age 61, both hemispheres 112.2
Gigantocellular reticular nuclei, medullary
nTPM: 198.7
2462 Male, age 74, both hemispheres 270.3
1876 Female, age 85, both hemispheres 213.2
2022 Male, age 76, right hemisphere 191.6
2310 Male, age 80, both hemispheres 185.4
2387 Female, age 91, both hemispheres 170.2
2314 Male, age 61, both hemispheres 161.5
Gigantocellular reticular nuclei, pars
nTPM: 225.5
2168 Male, age 76, both hemispheres 353.7
2084 Female, age 85, both hemispheres 227.3
2336 Male, age 61, both hemispheres 203.8
2330 Male, age 80, both hemispheres 171.5
2706 Male, age 80, both hemispheres 171.2
Inferior olive
nTPM: 173.6
2563 Male, age 74, both hemispheres 229.1
2628 Female, age 91, both hemispheres 198.1
2085 Female, age 85, both hemispheres 167.3
2178 Male, age 61, both hemispheres 150.7
2379 Male, age 80, both hemispheres 122.7
Kolliker-Fuse nucleus
nTPM: 194.2
2163 Male, age 80, both hemispheres 228.1
2793 Female, age 91, left hemisphere 205.0
2315 Male, age 76, right hemisphere 149.6
Lateral lemniscal nuclei
nTPM: 274.6
2169 Male, age 76, both hemispheres 353.5
2746 Female, age 85, left hemisphere 291.4
2036 Male, age 80, both hemispheres 281.1
2453 Male, age 74, right hemisphere 248.2
2320 Female, age 91, left hemisphere 198.9
Lateral medullary reticular nucleus
nTPM: 178.2
2044 Male, age 76, both hemispheres 211.3
2305 Male, age 74, both hemispheres 199.7
2804 Female, age 91, both hemispheres 179.2
2374 Male, age 61, both hemispheres 162.5
2190 Female, age 85, both hemispheres 161.4
2852 Male, age 80, both hemispheres 154.9
Lateral parabrachial nucleus
nTPM: 207.1
2139 Female, age 85, right hemisphere 334.3
2013 Male, age 80, both hemispheres 203.7
2790 Male, age 61, both hemispheres 171.9
2792 Male, age 76, both hemispheres 118.4
Lateral vestibular nucleus
nTPM: 202.0
2184 Male, age 76, both hemispheres 221.4
2311 Male, age 80, both hemispheres 182.5
Locus coeruleus
nTPM: 213.6
2123 Female, age 91, both hemispheres 281.2
2014 Male, age 55, unknown 236.1
2317 Female, age 72, unknown 212.8
2720 Male, age 74, both hemispheres 206.5
1980 Male, age 76, both hemispheres 193.9
2788 Male, age 74, unknown 183.6
2162 Male, age 80, both hemispheres 181.0
Medial olivary nucleus
nTPM: 137.6
2138 Female, age 91, both hemispheres 168.9
2851 Male, age 80, both hemispheres 149.6
1962 Male, age 76, both hemispheres 118.4
1943 Male, age 61, both hemispheres 113.4
Medial parabrachial nucleus
nTPM: 203.1
2170 Female, age 91, both hemispheres 224.8
2854 Male, age 80, both hemispheres 220.1
2156 Male, age 61, both hemispheres 197.7
2463 Female, age 85, right hemisphere 194.6
2786 Male, age 76, both hemispheres 178.3
Medial periolivary nuclei
nTPM: 242.7
2171 Female, age 85, both hemispheres 345.9
2063 Male, age 76, both hemispheres 322.7
2791 Male, age 74, right hemisphere 218.4
2458 Female, age 91, both hemispheres 165.4
2081 Male, age 80, both hemispheres 161.3
Medial vestibular nucleus
nTPM: 227.0
2801 Male, age 74, both hemispheres 241.8
2743 Female, age 85, both hemispheres 234.6
2093 Male, age 80, both hemispheres 230.5
2624 Male, age 61, both hemispheres 229.8
2803 Female, age 91, both hemispheres 212.8
2134 Male, age 76, both hemispheres 212.2
Motor facial nucleus
nTPM: 241.3
2062 Male, age 76, both hemispheres 353.2
2365 Male, age 74, right hemisphere 261.8
2697 Female, age 85, both hemispheres 238.2
2327 Male, age 80, both hemispheres 217.0
2795 Female, age 91, both hemispheres 201.0
2126 Male, age 61, both hemispheres 176.5
Motor hypoglossal nucleus
nTPM: 199.1
2125 Female, age 91, both hemispheres 247.6
2461 Male, age 61, both hemispheres 221.1
2132 Female, age 85, both hemispheres 216.8
2182 Male, age 80, both hemispheres 169.5
2277 Male, age 76, both hemispheres 140.6
Motor trigeminal nucleus
nTPM: 201.9
2079 Male, age 80, both hemispheres 249.6
2560 Male, age 74, both hemispheres 223.1
2335 Male, age 61, both hemispheres 189.0
2309 Male, age 76, both hemispheres 179.8
2321 Female, age 91, both hemispheres 168.0
Nuclei of the trapezoid body
nTPM: 278.4
2159 Male, age 61, both hemispheres 347.8
2735 Female, age 85, both hemispheres 341.9
1983 Male, age 76, both hemispheres 322.0
2166 Male, age 80, both hemispheres 203.6
2368 Female, age 91, both hemispheres 176.8
Nucleus ambiguus
nTPM: 192.3
2096 Female, age 85, both hemispheres 254.9
2071 Male, age 76, both hemispheres 129.7
Nucleus cuneatus
nTPM: 165.1
2564 Male, age 74, both hemispheres 222.1
2131 Male, age 76, both hemispheres 218.1
2100 Male, age 76, both hemispheres 191.1
2562 Male, age 61, both hemispheres 188.5
2376 Male, age 61, both hemispheres 165.5
2381 Male, age 80, both hemispheres 137.2
2805 Female, age 91, both hemispheres 136.3
2380 Male, age 80, both hemispheres 115.3
2808 Female, age 85, both hemispheres 111.6
Nucleus gracilis
nTPM: 152.5
2627 Male, age 74, both hemispheres 221.4
2299 Female, age 85, both hemispheres 119.0
2382 Male, age 80, both hemispheres 117.0
Nucleus raphe magnus
nTPM: 290.8
2160 Male, age 61, both hemispheres 391.2
2172 Female, age 85, both hemispheres 359.9
2455 Male, age 74, both hemispheres 317.4
2051 Male, age 76, both hemispheres 256.0
2328 Male, age 80, both hemispheres 237.3
2459 Female, age 91, both hemispheres 182.7
Nucleus raphe obscurus
nTPM: 148.9
2800 Male, age 61, midline 175.5
2845 Female, age 85, midline 170.3
2142 Male, age 76, midline 101.0
Nucleus raphe pallidus
nTPM: 157.5
2183 Male, age 80, midline 194.1
1924 Male, age 61, midline 158.2
2145 Male, age 76, midline 120.2
Nucleus tractus solitarii
nTPM: 165.6
2144 Female, age 91, right hemisphere 181.9
2191 Female, age 85, both hemispheres 174.8
2656 Male, age 76, both hemispheres 172.1
2307 Male, age 80, both hemispheres 133.6
Paramedian reticular nucleus
nTPM: 200.6
2050 Female, age 85, both hemispheres 293.5
2057 Male, age 80, both hemispheres 201.3
2313 Male, age 61, both hemispheres 186.8
2052 Male, age 76, both hemispheres 120.7
Parvicellular reticular nuclei
nTPM: 198.2
2558 Male, age 74, both hemispheres 227.5
2119 Male, age 80, both hemispheres 188.5
2095 Male, age 76, both hemispheres 178.6
Parvicellular reticular nuclei, medullary
nTPM: 220.9
2189 Female, age 91, both hemispheres 247.7
2091 Female, age 85, both hemispheres 215.4
2181 Male, age 80, left hemisphere 199.4
Pedunculopontine tegmental nucleus
nTPM: 181.2
1921 Female, age 85, both hemispheres 211.5
2334 Male, age 80, both hemispheres 182.8
2338 Male, age 61, both hemispheres 149.3
Peritrigeminal nucleus
nTPM: 193.9
2067 Female, age 85, both hemispheres 206.4
2179 Male, age 61, both hemispheres 201.0
2136 Male, age 76, both hemispheres 174.2
Pontine nuclei
nTPM: 304.2
2787 Female, age 85, both hemispheres 473.4
1863 Male, age 55, unknown 397.2
2109 Female, age 72, unknown 320.0
1968 Male, age 76, left hemisphere 318.9
2727 Male, age 61, right hemisphere 317.6
2454 Male, age 74, left hemisphere 230.0
2115 Male, age 80, left hemisphere 191.8
2319 Female, age 91, both hemispheres 184.8
Pontine raphe nucleus
nTPM: 238.4
2122 Female, age 85, midline 305.1
2853 Male, age 76, midline 171.7
Posteroventral cochlear nucleus
nTPM: 165.9
2752 Female, age 85, both hemispheres 220.7
2070 Male, age 76, both hemispheres 170.5
2371 Male, age 61, both hemispheres 168.4
2341 Male, age 80, both hemispheres 141.4
2135 Female, age 91, both hemispheres 128.5
Prepositus hypoglossal nucleus
nTPM: 202.3
2855 Female, age 85, right hemisphere 210.9
2086 Male, age 80, both hemispheres 193.7
Principal sensory trigeminal nucleus
nTPM: 247.0
2158 Male, age 61, both hemispheres 334.3
2008 Male, age 80, left hemisphere 276.7
2324 Male, age 76, both hemispheres 191.7
2367 Female, age 91, left hemisphere 185.1
Reticular pontine nucleus, caudal
nTPM: 215.6
2092 Male, age 76, both hemispheres 254.6
2332 Male, age 80, right hemisphere 254.6
2559 Male, age 74, both hemispheres 178.6
2457 Female, age 91, both hemispheres 174.5
Reticular pontine nucleus, oral
nTPM: 212.2
2012 Female, age 85, both hemispheres 291.8
2361 Male, age 74, both hemispheres 231.2
1939 Male, age 80, both hemispheres 190.0
2366 Female, age 91, both hemispheres 183.6
2167 Male, age 76, both hemispheres 164.4
Reticulotegmental nucleus
nTPM: 206.2
2325 Male, age 76, both hemispheres 233.7
2452 Male, age 74, both hemispheres 199.5
2322 Female, age 91, both hemispheres 196.0
2333 Male, age 80, both hemispheres 195.5
Spinal trigeminal nucleus, caudal
nTPM: 192.2
2390 Female, age 91, both hemispheres 267.0
2447 Male, age 76, both hemispheres 205.1
2642 Male, age 74, both hemispheres 175.9
2312 Male, age 61, both hemispheres 160.1
2308 Male, age 80, both hemispheres 152.7
Spinal trigeminal nucleus, interpolar
nTPM: 226.6
2625 Male, age 61, both hemispheres 308.9
2066 Male, age 76, right hemisphere 228.2
2389 Female, age 91, both hemispheres 218.3
2033 Male, age 80, both hemispheres 197.3
2386 Female, age 85, both hemispheres 180.2
Spinal trigeminal nucleus, oral
nTPM: 211.6
2737 Female, age 85, both hemispheres 232.6
2164 Male, age 80, both hemispheres 201.4
1978 Male, age 76, both hemispheres 200.8
Spinal vestibular nucleus
nTPM: 197.2
2186 Female, age 91, both hemispheres 247.2
2780 Male, age 80, both hemispheres 223.8
2806 Female, age 85, both hemispheres 191.9
2796 Male, age 61, both hemispheres 185.1
2748 Male, age 76, both hemispheres 179.0
2384 Male, age 74, both hemispheres 156.0
Subcoeruleus area
nTPM: 215.4
2089 Male, age 76, left hemisphere 281.8
1958 Male, age 80, both hemispheres 240.1
2323 Female, age 91, left hemisphere 220.9
2451 Male, age 74, both hemispheres 168.3
2369 Female, age 85, left hemisphere 165.7
Superior olive
nTPM: 255.7
1875 Female, age 85, both hemispheres 361.3
2020 Male, age 76, both hemispheres 263.6
2364 Male, age 74, right hemisphere 242.9
2329 Male, age 80, right hemisphere 217.5
2561 Female, age 91, both hemispheres 193.3
Superior vestibular nucleus
nTPM: 208.1
2383 Male, age 74, both hemispheres 255.5
2015 Male, age 80, both hemispheres 209.0
2061 Male, age 76, both hemispheres 159.7
Ventral medullary reticular nucleus
nTPM: 169.5
2060 Male, age 76, both hemispheres 183.3
2372 Male, age 61, both hemispheres 155.6
Ventral periolivary nuclei
nTPM: 251.8
2130 Female, age 85, both hemispheres 326.2
2165 Male, age 80, both hemispheres 274.7
2023 Male, age 76, both hemispheres 233.8
2794 Female, age 91, left hemisphere 172.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 181.2
2741 Female, age 85, both hemispheres 212.2
1986 Male, age 76, both hemispheres 200.4
2302 Female, age 91, both hemispheres 183.4
2180 Male, age 61, both hemispheres 171.7
2118 Male, age 80, both hemispheres 138.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 214.7
1959 Male, age 76, both hemispheres 269.7
2449 Male, age 74, both hemispheres 264.9
2840 Female, age 85, both hemispheres 234.6
2161 Male, age 80, both hemispheres 212.1
2456 Female, age 91, both hemispheres 165.5
2359 Male, age 61, both hemispheres 141.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 552.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 453.8
FF:10182-103D2 60 years, female 559.1
FF:10165-103B3 76 years, female 348.6
Medulla oblongata
Scaled Tags Per Million: 441.7
FF:10038-101F2 18-64 years, mixed 478.0
FF:10174-103C3 60 years, female 447.5
FF:10155-103A2 76 years, female 399.5
Pons
Scaled Tags Per Million: 552.1
FF:10033-101E6 18-54 years, mixed 552.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 250.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 192.2
Samples: 4

Max nTPM: 216.9
Min nTPM: 148.2
Sample A Female 216.9
Sample B Female 200.6
Sample C Male 203.2
Sample D Male 148.2
Pons
nTPM: 250.2
Samples: 4

Max nTPM: 398.6
Min nTPM: 191.0
Sample A Female 398.6
Sample B Female 192.3
Sample C Male 191.0
Sample D Male 218.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 214.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 214.9
Samples: 4

Max nTPM: 225.9
Min nTPM: 198.6
Sample A Male 225.9
Sample B Male 220.1
Sample C Female 215.0
Sample D Female 198.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 18.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 18.6
73769319 Antisense, RP_051121_04_B04, Mouse strain C57BL/6J (56 days, male) 21.3
68745197 Antisense, RP_050210_01_D09, Mouse strain C57BL/6J (56 days, male) 15.8
Pons
Expression energy: 18.4
73769319 Antisense, RP_051121_04_B04, Mouse strain C57BL/6J (56 days, male) 19.6
68745197 Antisense, RP_050210_01_D09, Mouse strain C57BL/6J (56 days, male) 17.3

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