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PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GATM
Synonyms AGAT
Gene descriptioni

Full gene name according to HGNC.

Glycine amidinotransferase
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 15
Cytoband q21.1
Chromosome location (bp) 45361124 - 45402327
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000171766 (version 109)
Entrez gene 2628
HGNC HGNC:4175
UniProt P50440 (UniProt - Evidence at protein level)
neXtProt NX_P50440
GeneCards GATM
Antibodypedia GATM antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Transamidinase that catalyzes the transfer of the amidino group of L-arginine onto the amino moiety of acceptor metabolites such as glycine, beta-alanine, gamma-aminobutyric acid (GABA) and taurine yielding the corresponding guanidine derivatives 1, 2, 3, 4. Catalyzes the rate-limiting step of creatine biosynthesis, namely the transfer of the amidino group from L-arginine to glycine to generate guanidinoacetate, which is then methylated by GAMT to form creatine. Provides creatine as a source for ATP generation in tissues with high energy demands, in particular skeletal muscle, heart and brain (Probable) 5, 6, 7, 8.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Transferase
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a mitochondrial enzyme that belongs to the amidinotransferase family. This enzyme is involved in creatine biosynthesis, whereby it catalyzes the transfer of a guanido group from L-arginine to glycine, resulting in guanidinoacetic acid, the immediate precursor of creatine. Mutations in this gene cause arginine:glycine amidinotransferase deficiency, an inborn error of creatine synthesis characterized by cognitive disability, language impairment, and behavioral disorders. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GATM-201
ENSP00000379895
ENST00000396659
P50440
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
A0A140VK19
[Target identity:100%; Query identity:100%] Glycine amidinotransferase
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005758 [mitochondrial intermembrane space]
GO:0006600 [creatine metabolic process]
GO:0006601 [creatine biosynthetic process]
GO:0007611 [learning or memory]
GO:0014889 [muscle atrophy]
GO:0015067 [amidinotransferase activity]
GO:0015068 [glycine amidinotransferase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
GO:0070062 [extracellular exosome]
GO:0120162 [positive regulation of cold-induced thermogenesis]
Show all
423 aa
48.5 kDa
No 0
GATM-205
ENSP00000453781
ENST00000558163
H0YMX4
[Direct mapping] Glycine amidinotransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006601 [creatine biosynthetic process]
GO:0015067 [amidinotransferase activity]
GO:0015068 [glycine amidinotransferase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
Show all
167 aa
19.5 kDa
No 0
GATM-206
ENSP00000454008
ENST00000558336
P50440
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005758 [mitochondrial intermembrane space]
GO:0006600 [creatine metabolic process]
GO:0006601 [creatine biosynthetic process]
GO:0007611 [learning or memory]
GO:0014889 [muscle atrophy]
GO:0015067 [amidinotransferase activity]
GO:0015068 [glycine amidinotransferase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
GO:0070062 [extracellular exosome]
GO:0120162 [positive regulation of cold-induced thermogenesis]
Show all
391 aa
44.9 kDa
No 0
GATM-208
ENSP00000453151
ENST00000558537
H0YLC6
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
32 aa
3.7 kDa
No 0
GATM-210
ENSP00000453087
ENST00000559885
H0YL75
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
15 aa
1.7 kDa
No 0
GATM-212
ENSP00000453860
ENST00000561148
H0YN43
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
31 aa
3.6 kDa
No 0
GATM-216
ENSP00000502445
ENST00000675323
P50440
[Direct mapping] Glycine amidinotransferase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Transferases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005758 [mitochondrial intermembrane space]
GO:0006600 [creatine metabolic process]
GO:0006601 [creatine biosynthetic process]
GO:0007611 [learning or memory]
GO:0014889 [muscle atrophy]
GO:0015067 [amidinotransferase activity]
GO:0015068 [glycine amidinotransferase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
GO:0070062 [extracellular exosome]
GO:0120162 [positive regulation of cold-induced thermogenesis]
Show all
391 aa
44.9 kDa
No 0
GATM-217
ENSP00000502671
ENST00000675701
A0A6Q8PHC6
[Direct mapping] Glycine amidinotransferase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of amino acid metabolism
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0006601 [creatine biosynthetic process]
GO:0015067 [amidinotransferase activity]
GO:0015068 [glycine amidinotransferase activity]
GO:0016020 [membrane]
GO:0016740 [transferase activity]
Show all
403 aa
46.3 kDa
No 0

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