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KNDC1
HPA
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  • KNDC1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KNDC1
Synonyms bB439H18.3, C10orf23, FLJ25027, KIAA1768, RASGEF2, v-KIND, Very-KIND
Gene descriptioni

Full gene name according to HGNC.

Kinase non-catalytic C-lobe domain containing 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q26.3
Chromosome location (bp) 133160219 - 133226412
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000171798 (version 109)
Entrez gene 85442
HGNC HGNC:29374
UniProt Q76NI1 (UniProt - Evidence at transcript level)
neXtProt NX_Q76NI1
GeneCards KNDC1
Antibodypedia KNDC1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

RAS-Guanine nucleotide exchange factor (GEF) that controls the negative regulation of neuronal dendrite growth by mediating a signaling pathway linking RAS and MAP2 (By similarity). May be involved in cellular senescence 1.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Guanine-nucleotide releasing factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a Ras guanine nucleotide exchange factor that appears to negatively regulate dendritic growth in the brain. Knockdown of this gene in senescent umbilical vein endothelial cells partially reversed the senescence, showing that this gene could potentially be targeted by anti-aging therapies. [provided by RefSeq, Dec 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
KNDC1-201
ENSP00000304437
ENST00000304613
Q76NI1
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0001934 [positive regulation of protein phosphorylation]
GO:0003674 [molecular_function]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005575 [cellular_component]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008150 [biological_process]
GO:0021707 [cerebellar granule cell differentiation]
GO:0030425 [dendrite]
GO:0032045 [guanyl-nucleotide exchange factor complex]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0043204 [perikaryon]
GO:0048814 [regulation of dendrite morphogenesis]
GO:0050773 [regulation of dendrite development]
Show all
1749 aa
191.4 kDa
No 0
KNDC1-202
ENSP00000357560
ENST00000368571
Q76NI1
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
A0A7I2PM36
[Direct mapping] HCG19796, isoform CRA_b; Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0001934 [positive regulation of protein phosphorylation]
GO:0003674 [molecular_function]
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0005575 [cellular_component]
GO:0007264 [small GTPase mediated signal transduction]
GO:0008150 [biological_process]
GO:0021707 [cerebellar granule cell differentiation]
GO:0030425 [dendrite]
GO:0032045 [guanyl-nucleotide exchange factor complex]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0043204 [perikaryon]
GO:0048814 [regulation of dendrite morphogenesis]
GO:0050773 [regulation of dendrite development]
Show all
1397 aa
148.6 kDa
No 0
KNDC1-203
ENSP00000506878
ENST00000478074
A0A804HI34
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
133 aa
14.6 kDa
No 0
KNDC1-209
ENSP00000507187
ENST00000682399
A0A804HIR2
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
45 aa
5.3 kDa
No 0
KNDC1-210
ENSP00000507020
ENST00000682765
A0A804HID6
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
139 aa
15.1 kDa
No 0
KNDC1-211
ENSP00000507907
ENST00000683144
A0A804HKF6
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
133 aa
14.8 kDa
No 0
KNDC1-213
ENSP00000506821
ENST00000683259
A0A804HHZ0
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
124 aa
13.6 kDa
No 0
KNDC1-220
ENSP00000507892
ENST00000684248
A0A804HKE4
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
117 aa
12.9 kDa
No 0
KNDC1-223
ENSP00000507288
ENST00000684739
A0A804HIZ4
[Direct mapping] Kinase non-catalytic C-lobe domain-containing protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005085 [guanyl-nucleotide exchange factor activity]
GO:0007264 [small GTPase mediated signal transduction]
Show all
170 aa
18.3 kDa
No 0

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