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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Low
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Low
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:290.9 nTPM
HPA Brain:259.5 nTPM
GTEx:290.9 nTPM
FANTOM5:726.5 Scaled Tags Per Million
Pig:255.7 nTPM
Mouse:482.4 nTPM
Allen mouse:9.6 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042754Antibody HPA043398
Bergmann glia - cytoplasm/membrane -Not detected
Bergmann glia - nucleus -Not detected
GLUC cells - cytoplasm/membrane -Not detected
GLUC cells - nucleus -Not detected
Purkinje cells Medium-
Purkinje cells - cytoplasm/membrane -Medium
Purkinje cells - dendrites -Not detected
Purkinje cells - nucleus -Not detected
Cells in granular layer Low-
Cells in molecular layer Not detected-
Granular cells - cytoplasm/membrane -Low
Granular cells - nucleus -Not detected
Molecular layer - neuropil -Low
Molecular layer cells - cytoplasm/membrane -Not detected
Molecular layer cells - nucleus -Not detected
Processes in granular layer -Not detected
Processes in molecular layer -Not detected
Processes in white matter -Not detected
Synaptic glomeruli - capsule -Not detected
Synaptic glomeruli - core -Not detected
White matter cells - cytoplasm/membrane -Low
White matter cells - nucleus -Not detected





CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

259.5
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 259.5
2101 Male, age 74, right hemisphere 392.7
2006 Male, age 61, right hemisphere 301.7
1768 Female, age 72, unknown 298.4
2055 Female, age 91, right hemisphere 229.8
1774 Male, age 80, left hemisphere 229.5
1788 Male, age 55, unknown 221.7
1769 Male, age 76, right hemisphere 206.7
2003 Female, age 85, right hemisphere 195.5
Cerebellar nuclei
nTPM: 234.4
2783 Female, age 72, unknown 305.5
2318 Male, age 74, left hemisphere 294.3
1871 Male, age 74, unknown 245.4
1966 Female, age 91, left hemisphere 236.4
2177 Female, age 85, both hemispheres 230.9
2005 Male, age 80, left hemisphere 208.2
2175 Male, age 61, right hemisphere 202.6
1879 Male, age 55, unknown 198.8
2882 Male, age 76, left hemisphere 187.3
Flocculonodular lobe
nTPM: 247.5
2004 Male, age 61, right hemisphere 402.3
1792 Male, age 74, unknown 244.6
1771 Male, age 80, left hemisphere 239.6
2176 Female, age 91, right hemisphere 238.6
1835 Female, age 85, right hemisphere 217.2
1765 Male, age 55, unknown 211.6
1767 Male, age 76, left hemisphere 178.6
Vermis
nTPM: 233.5
1751 Male, age 74, right hemisphere 343.0
1928 Female, age 72, unknown 262.8
1766 Male, age 55, unknown 244.2
1778 Female, age 91, left hemisphere 236.3
2834 Male, age 80, left hemisphere 235.9
1825 Male, age 74, unknown 211.4
1770 Male, age 76, left hemisphere 197.2
2460 Male, age 61, both hemispheres 185.8
1988 Female, age 85, left hemisphere 184.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

290.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 290.9
Samples: 215

Max nTPM: 584.4
Min nTPM: 143.3
Std nTPM: 71.0
Median nTPM: 282.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 584.4
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 544.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 484.2
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 454.9
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 446.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 442.0
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 436.9
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 430.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 430.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 416.4
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 404.5
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 402.2
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 397.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 394.0
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 393.7
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 393.7
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 390.1
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 390.0
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 384.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 381.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 378.9
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 375.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 373.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 372.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 372.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 369.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 368.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 367.8
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 367.4
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 366.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 365.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 364.0
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 363.7
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 360.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 360.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 359.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 356.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 351.9
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 348.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 348.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 347.9
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 347.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 346.5
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 346.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 346.0
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 345.2
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 343.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 343.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 342.5
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 342.3
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 340.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 339.4
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 338.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 337.5
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 336.8
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 336.6
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 336.5
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 336.3
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 336.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 331.9
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 330.7
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 327.7
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 326.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 325.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 325.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 324.5
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 323.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 323.6
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 322.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 321.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 320.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 320.5
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 319.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 317.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 317.2
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 315.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 313.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 313.7
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 313.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 313.1
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 313.0
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 311.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 309.3
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 309.1
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 308.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 306.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 305.9
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 305.5
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 305.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 304.2
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 302.5
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 302.1
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 300.9
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 300.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 300.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 300.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 298.8
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 298.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 295.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 295.5
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 293.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 292.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 290.5
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 288.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 287.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 286.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 285.7
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 282.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 280.8
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 279.7
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 279.7
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 277.1
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 276.9
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 276.8
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 276.4
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 275.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 274.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 274.1
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 273.8
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 273.2
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 271.1
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 270.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 270.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 270.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 270.1
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 269.5
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 269.5
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 269.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 268.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 267.1
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 266.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 264.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 263.9
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 262.8
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 261.6
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 260.9
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 258.0
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 257.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 256.8
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 256.6
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 255.8
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 255.8
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 254.3
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 251.1
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 250.2
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 250.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 248.8
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 248.2
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 247.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 246.8
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 245.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 245.8
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 244.5
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 243.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 242.9
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 242.6
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 241.8
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 241.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 240.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 239.4
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 239.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 238.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 237.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 236.9
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 235.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 235.7
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 235.0
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 233.6
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 233.5
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 233.1
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 232.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 231.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 229.5
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 229.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 228.2
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 227.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 225.4
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 224.8
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 224.1
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 221.6
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 221.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 220.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 219.5
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 218.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 217.2
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 216.8
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 216.7
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 216.0
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 213.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 210.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 209.8
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 208.0
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 206.3
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 206.2
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 201.5
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 200.7
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 200.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 198.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 194.7
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 193.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 192.8
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 192.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 190.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 189.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 189.6
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 189.5
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 184.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 184.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 183.9
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 179.1
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 168.1
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 157.5
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 153.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 148.7
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 143.3
Show allShow less
Brain - Cerebellum
Average nTPM: 222.4
Samples: 241

Max nTPM: 419.4
Min nTPM: 117.8
Std nTPM: 50.5
Median nTPM: 217.0
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 419.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 409.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 404.9
GTEX-1192X-3226-SM-5987D 50-59 years, male 357.3
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 339.6
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 337.7
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 337.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 327.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 325.4
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 323.2
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 318.4
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 310.0
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 309.5
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 308.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 305.8
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 304.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 303.8
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 302.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 300.7
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 298.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 297.8
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 297.7
GTEX-1B933-3026-SM-731DB 50-59 years, female 295.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 293.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 292.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 292.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 289.6
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 288.6
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 287.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 285.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 283.6
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 279.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 279.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 277.2
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 276.0
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 275.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 275.4
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 275.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 274.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 272.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 271.7
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 270.4
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 268.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 266.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 264.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 263.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 261.8
GTEX-15G19-2826-SM-6M48K 60-69 years, male 261.0
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 261.0
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 257.5
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 257.3
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 257.2
GTEX-12126-0926-SM-5FQTW 20-29 years, male 256.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 255.2
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 254.9
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 254.7
GTEX-18465-2926-SM-7KFSE 50-59 years, male 252.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 251.7
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 251.2
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 249.9
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 249.8
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 249.8
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 247.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 247.7
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 245.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 243.9
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 241.5
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 241.5
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 241.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 241.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 241.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 240.5
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 240.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 240.2
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 239.4
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 239.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 238.1
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 236.9
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 236.8
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 236.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 236.2
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 234.9
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 234.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 231.9
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 231.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 230.9
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 230.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 230.5
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 230.3
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 229.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 229.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 229.0
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 227.6
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 227.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 226.7
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 225.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 225.4
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 223.6
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 223.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 223.2
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 223.0
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 222.9
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 222.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 222.7
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 222.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 222.3
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 222.1
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 222.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 221.5
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 221.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 220.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 220.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 220.4
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 219.2
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 218.8
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 217.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 217.8
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 217.3
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 217.2
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 217.0
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 217.0
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 216.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 216.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 215.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 214.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 214.5
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 213.8
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 213.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 212.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 211.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 211.4
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 210.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 208.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 207.6
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 207.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 207.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 206.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 206.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 204.8
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 204.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 204.1
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 203.1
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 203.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 202.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 201.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 201.2
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 200.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 200.8
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 200.0
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 199.2
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 199.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 199.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 198.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 198.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 198.0
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 197.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 197.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 197.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 196.3
GTEX-17EVP-2926-SM-793BU 40-49 years, male 195.6
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 195.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 195.5
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 195.5
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 195.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 195.1
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 192.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 192.9
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 191.6
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 191.3
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 190.7
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 189.4
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 189.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 188.5
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 188.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 187.7
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 187.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 186.8
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 186.7
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 186.0
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 185.5
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 185.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 185.0
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 184.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 183.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 183.8
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 183.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 183.6
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 183.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 182.8
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 182.6
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 182.1
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 181.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 181.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 180.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 180.4
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 179.3
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 179.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 179.0
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 178.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 178.1
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 178.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 177.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 176.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 176.7
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 176.6
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 176.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 175.8
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 175.3
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 174.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 174.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 174.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 173.0
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 172.7
GTEX-11EI6-2926-SM-5985U 60-69 years, male 171.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 170.8
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 170.2
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 169.4
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 169.0
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 168.7
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 166.2
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 164.2
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 163.1
GTEX-144GL-2926-SM-5O99F 50-59 years, male 162.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 162.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 161.1
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 161.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 157.4
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 155.9
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 153.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 153.2
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 151.4
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 146.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 145.8
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 144.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 144.4
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 144.3
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 138.8
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 138.0
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 134.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 120.4
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 117.8
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

726.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 726.5
FF:10166-103B4 76 years, female 771.3
FF:10083-102B2 22-68 years, mixed 681.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

255.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 255.7
Samples: 4

Max nTPM: 362.6
Min nTPM: 205.6
Sample A Female 362.6
Sample B Female 231.4
Sample C Male 205.6
Sample D Male 223.1

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

482.4
Mouse sample Sample description nTPM
Cerebellum
nTPM: 482.4
Samples: 4

Max nTPM: 547.4
Min nTPM: 444.4
Sample A Male 547.4
Sample B Male 471.2
Sample C Female 466.7
Sample D Female 444.4

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.6
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 9.6
1405 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 9.6
1406 Antisense, RP_040324_01_A01, Mouse strain C57BL/6J (56 days, male) 5.2

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