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QARS1
HPA
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  • QARS1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

QARS1
Synonyms QARS
Gene descriptioni

Full gene name according to HGNC.

Glutaminyl-tRNA synthetase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband p21.31
Chromosome location (bp) 49095932 - 49105130
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
Ensembl ENSG00000172053 (version 109)
Entrez gene 5859
HGNC HGNC:9751
UniProt P47897 (UniProt - Evidence at protein level)
neXtProt NX_P47897
GeneCards QARS1
Antibodypedia QARS1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Glutamine--tRNA ligase 1. Plays a critical role in brain development 2.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Aminoacyl-tRNA synthetase, Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein biosynthesis
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Aminoacyl-tRNA synthetases catalyze the aminoacylation of tRNA by their cognate amino acid. Because of their central role in linking amino acids with nucleotide triplets contained in tRNAs, aminoacyl-tRNA synthetases are thought to be among the first proteins that appeared in evolution. In metazoans, 9 aminoacyl-tRNA synthetases specific for glutamine (gln), glutamic acid (glu), and 7 other amino acids are associated within a multienzyme complex. Although present in eukaryotes, glutaminyl-tRNA synthetase (QARS) is absent from many prokaryotes, mitochondria, and chloroplasts, in which Gln-tRNA(Gln) is formed by transamidation of the misacylated Glu-tRNA(Gln). Glutaminyl-tRNA synthetase belongs to the class-I aminoacyl-tRNA synthetase family. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
QARS1-201
ENSP00000307567
ENST00000306125
P47897
[Direct mapping] Glutamine--tRNA ligase
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004860 [protein kinase inhibitor activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005759 [mitochondrial matrix]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006469 [negative regulation of protein kinase activity]
GO:0007420 [brain development]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0019901 [protein kinase binding]
GO:0032873 [negative regulation of stress-activated MAPK cascade]
GO:0032991 [protein-containing complex]
GO:0043039 [tRNA aminoacylation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:2001234 [negative regulation of apoptotic signaling pathway]
Show all
775 aa
87.8 kDa
No 0
QARS1-202
ENSP00000390015
ENST00000414533
P47897
[Direct mapping] Glutamine--tRNA ligase
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0004860 [protein kinase inhibitor activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005759 [mitochondrial matrix]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0006469 [negative regulation of protein kinase activity]
GO:0007420 [brain development]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0019901 [protein kinase binding]
GO:0032873 [negative regulation of stress-activated MAPK cascade]
GO:0032991 [protein-containing complex]
GO:0043039 [tRNA aminoacylation]
GO:0045892 [negative regulation of DNA-templated transcription]
GO:2001234 [negative regulation of apoptotic signaling pathway]
Show all
764 aa
86.6 kDa
No 0
QARS1-206
ENSP00000392850
ENST00000452739
C9J165
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
GO:0043039 [tRNA aminoacylation]
Show all
339 aa
38.1 kDa
No 0
QARS1-207
ENSP00000396326
ENST00000453392
H7C0R3
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0016874 [ligase activity]
GO:0043039 [tRNA aminoacylation]
Show all
253 aa
28.6 kDa
No 0
QARS1-209
ENSP00000489011
ENST00000464962
B4DDN1
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
GO:0017101 [aminoacyl-tRNA synthetase multienzyme complex]
GO:0043039 [tRNA aminoacylation]
Show all
630 aa
71.7 kDa
No 0
QARS1-210
ENSP00000489462
ENST00000466179
A0A0U1RRC8
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
Show all
91 aa
10.1 kDa
No 0
QARS1-228
ENSP00000489118
ENST00000634432
A0A0U1RQQ5
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0006412 [translation]
GO:0016874 [ligase activity]
GO:0043039 [tRNA aminoacylation]
Show all
194 aa
22.6 kDa
No 0
QARS1-230
ENSP00000489039
ENST00000634527
A0A0U1RQJ6
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0006425 [glutaminyl-tRNA aminoacylation]
Show all
96 aa
10.9 kDa
No 0
QARS1-231
ENSP00000489082
ENST00000634602
A0A0U1RQM8
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0016874 [ligase activity]
Show all
173 aa
19.1 kDa
No 0
QARS1-237
ENSP00000488960
ENST00000635194
A0A0U1RQE9
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
Show all
187 aa
20.8 kDa
No 0
QARS1-238
ENSP00000489550
ENST00000635231
A0A0U1RRI9
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
Show all
182 aa
20.3 kDa
No 0
QARS1-240
ENSP00000489056
ENST00000635292
A0A0U1RQL2
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016020 [membrane]
GO:0016874 [ligase activity]
Show all
191 aa
21.4 kDa
No 1
QARS1-242
ENSP00000489154
ENST00000635443
A0A0U1RQT0
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
GO:0043039 [tRNA aminoacylation]
Show all
342 aa
38.5 kDa
No 0
QARS1-245
ENSP00000489365
ENST00000635541
A0A0U1RR66
[Direct mapping] Glutaminyl-tRNA synthetase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004812 [aminoacyl-tRNA ligase activity]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0006412 [translation]
GO:0006418 [tRNA aminoacylation for protein translation]
GO:0006425 [glutaminyl-tRNA aminoacylation]
GO:0016874 [ligase activity]
GO:0043039 [tRNA aminoacylation]
Show all
173 aa
19.5 kDa
No 0
QARS1-246
ENSP00000489558
ENST00000635622
A0A0U1RRJ7
[Direct mapping] Glutamine--tRNA ligase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0004819 [glutamine-tRNA ligase activity]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0006425 [glutaminyl-tRNA aminoacylation]
Show all
68 aa
7.7 kDa
No 0

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