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PAIP1
HPA
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  • PAIP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PAIP1
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Poly(A) binding protein interacting protein 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband p12
Chromosome location (bp) 43526267 - 43557758
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000172239 (version 109)
Entrez gene 10605
HGNC HGNC:16945
UniProt Q9H074 (UniProt - Evidence at protein level)
neXtProt NX_Q9H074
GeneCards PAIP1
Antibodypedia PAIP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Acts as a coactivator in the regulation of translation initiation of poly(A)-containing mRNAs. Its stimulatory activity on translation is mediated via its action on PABPC1. Competes with PAIP2 for binding to PABPC1. Its association with EIF4A and PABPC1 may potentiate contacts between mRNA termini. May also be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction, Translation regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene interacts with poly(A)-binding protein and with the cap-binding complex eIF4A. It is involved in translational initiation and protein biosynthesis. Overexpression of this gene in COS7 cells stimulates translation. Alternative splicing occurs at this locus and three transcript variants encoding three distinct isoforms have been identified. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PAIP1-201
ENSP00000302768
ENST00000306846
Q9H074
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006413 [translational initiation]
GO:0006417 [regulation of translation]
GO:0006446 [regulation of translational initiation]
GO:0008494 [translation activator activity]
GO:0044794 [positive regulation by host of viral process]
GO:0048255 [mRNA stabilization]
GO:0070934 [CRD-mediated mRNA stabilization]
GO:0106002 [mCRD-mediated mRNA stability complex]
GO:1900152 [negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay]
GO:2000767 [positive regulation of cytoplasmic translation]
Show all
479 aa
53.5 kDa
No 0
PAIP1-202
ENSP00000339622
ENST00000338972
Q9H074
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006413 [translational initiation]
GO:0006417 [regulation of translation]
GO:0006446 [regulation of translational initiation]
GO:0008494 [translation activator activity]
GO:0044794 [positive regulation by host of viral process]
GO:0048255 [mRNA stabilization]
GO:0070934 [CRD-mediated mRNA stabilization]
GO:0106002 [mCRD-mediated mRNA stability complex]
GO:1900152 [negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay]
GO:2000767 [positive regulation of cytoplasmic translation]
Show all
367 aa
42 kDa
No 0
PAIP1-203
ENSP00000387729
ENST00000436644
Q9H074
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006413 [translational initiation]
GO:0006417 [regulation of translation]
GO:0006446 [regulation of translational initiation]
GO:0008494 [translation activator activity]
GO:0044794 [positive regulation by host of viral process]
GO:0048255 [mRNA stabilization]
GO:0070934 [CRD-mediated mRNA stabilization]
GO:0106002 [mCRD-mediated mRNA stability complex]
GO:1900152 [negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay]
GO:2000767 [positive regulation of cytoplasmic translation]
Show all
400 aa
45.6 kDa
No 0
PAIP1-204
ENSP00000427410
ENST00000504075
A0A1D5RMS4
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
9 aa
1 kDa
No 0
PAIP1-206
ENSP00000425736
ENST00000508537
D6RJ02
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
   SPOCTOPUS predicted membrane proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
Show all
168 aa
19.1 kDa
No 0
PAIP1-207
ENSP00000425675
ENST00000511321
D6RJF2
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
Show all
200 aa
22.6 kDa
No 0
PAIP1-208
ENSP00000425084
ENST00000514514
D6REB4
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
Show all
351 aa
39.9 kDa
No 0
PAIP1-209
ENSP00000426089
ENST00000514816
H0YA44
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
49 aa
5.6 kDa
No 0
PAIP1-210
ENSP00000425406
ENST00000515338
D6RD97
[Direct mapping] Polyadenylate-binding protein-interacting protein 1
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
95 aa
10.7 kDa
No 0

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