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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
41.7
nTPM
HPA Brain:
47.7
nTPM
GTEx:
41.7
nTPM
FANTOM5:
81.3
Scaled Tags Per Million
Pig:
48.8
nTPM
Mouse:
52.8
nTPM
Allen mouse:
10.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.7
Sample id
Sample description
nTPM
Amygdala nTPM: 30.6
2517
Female, age 94, left hemisphere
46.9
2814
Male, age 76, right hemisphere
36.8
1987
Female, age 91, left hemisphere
30.5
2695
Female, age 67, right hemisphere
21.2
2514
Male, age 75, right hemisphere
17.6
Basal amygdala nTPM: 47.7
2685
Female, age 94, left hemisphere
61.7
2243
Female, age 91, right hemisphere
57.3
2110
Male, age 80, left hemisphere
49.7
1955
Male, age 76, both hemispheres
48.0
2827
Female, age 67, right hemisphere
38.9
2609
Male, age 75, right hemisphere
30.3
Central amygdala nTPM: 37.1
2826
Female, age 94, left hemisphere
57.8
2239
Male, age 80, left hemisphere
42.8
1905
Male, age 76, both hemispheres
38.3
2701
Female, age 91, right hemisphere
24.8
2515
Male, age 75, right hemisphere
21.5
Corticomedial amygdala nTPM: 44.9
2535
Female, age 67, right hemisphere
61.1
2829
Male, age 80, left hemisphere
53.5
2242
Female, age 91, right hemisphere
49.7
2429
Female, age 94, left hemisphere
47.4
2240
Male, age 76, both hemispheres
32.1
2428
Male, age 75, right hemisphere
25.8
Lateral amygdala nTPM: 38.6
2534
Female, age 94, left hemisphere
70.2
1883
Male, age 76, both hemispheres
43.6
2256
Male, age 80, left hemisphere
42.7
2255
Female, age 91, right hemisphere
42.0
2830
Female, age 67, right hemisphere
16.7
2516
Male, age 75, right hemisphere
16.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 41.7
Samples: 152
Max nTPM: 115.2
Min nTPM: 1.9
Std nTPM: 24.2
Median nTPM: 37.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
115.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
110.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
105.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
101.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
96.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
93.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
91.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
88.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
87.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
86.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
86.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
81.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
81.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
77.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
76.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
75.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
75.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
74.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
73.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
73.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
72.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
70.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
69.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
68.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
67.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
67.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
66.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
66.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
62.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
62.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
60.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
59.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
59.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
58.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
58.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
58.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
54.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
54.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
53.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
53.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
51.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
51.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
50.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
50.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
49.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
48.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
47.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
47.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
46.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
46.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
45.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
44.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
44.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
43.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
42.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
42.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
41.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
40.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
40.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
40.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
40.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
40.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
40.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
39.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
39.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
38.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
38.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
37.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
37.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
37.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
36.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
36.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
36.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
35.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
35.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
35.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
35.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
34.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
33.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
32.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
32.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
32.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
31.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
31.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
30.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
30.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
30.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
29.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
29.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
29.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
28.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
27.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
27.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
27.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
26.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
25.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
25.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
24.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
24.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
23.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
23.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
22.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
22.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
22.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
21.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
21.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
21.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
20.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
19.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
19.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
19.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
19.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
18.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
18.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
18.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
17.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
17.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
16.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
15.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
15.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
15.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
15.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
15.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
14.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
14.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
14.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
13.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
12.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
11.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
11.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
11.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
10.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
10.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
9.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
8.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
7.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 52.8
Samples: 4
Max nTPM: 78.6
Min nTPM: 39.5
Sample A
Male
53.1
Sample B
Male
39.5
Sample C
Female
78.6
Sample D
Female
40.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
