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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:107.6 nTPM
HPA Brain:65.5 nTPM
GTEx:107.6 nTPM
FANTOM5:88.7 Scaled Tags Per Million
Pig:54.7 nTPM
Mouse:76.0 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052552
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 48.5
2481 Female, age 94, left hemisphere 61.9
2846 Female, age 79, unknown 52.9
1857 Female, age 85, left hemisphere 52.4
1781 Male, age 74, unknown 51.3
1854 Male, age 80, left hemisphere 49.9
2290 Female, age 72, unknown 44.5
2288 Male, age 75, left hemisphere 39.7
2289 Male, age 61, right hemisphere 35.5
Globus pallidus, externus
nTPM: 46.8
2772 Female, age 79, unknown 62.4
1996 Male, age 80, right hemisphere 52.1
2395 Male, age 75, both hemispheres 48.1
2646 Male, age 61, right hemisphere 38.6
2567 Female, age 72, unknown 33.0
Globus pallidus, internus
nTPM: 44.4
2483 Female, age 94, right hemisphere 64.8
2287 Male, age 75, right hemisphere 51.5
2037 Male, age 80, right hemisphere 47.3
1818 Male, age 74, unknown 47.2
2778 Female, age 91, both hemispheres 41.0
2566 Female, age 72, unknown 31.7
2111 Female, age 85, right hemisphere 27.5
Nucleus accumbens
nTPM: 50.6
1856 Female, age 91, right hemisphere 74.4
1806 Female, age 85, left hemisphere 56.4
1783 Male, age 74, unknown 53.1
2698 Female, age 72, unknown 48.6
2286 Male, age 75, left hemisphere 48.3
2732 Male, age 80, right hemisphere 44.3
2824 Male, age 61, right hemisphere 41.5
2391 Female, age 94, left hemisphere 38.4
Nucleus basalis of Meynert
nTPM: 42.7
2393 Male, age 80, right hemisphere 47.4
2821 Male, age 75, both hemispheres 43.8
2484 Female, age 94, left hemisphere 42.9
2569 Male, age 61, both hemispheres 36.8
Nucleus of the diagonal band
nTPM: 65.5
2775 Male, age 80, right hemisphere 80.7
1812 Female, age 91, both hemispheres 78.8
2195 Female, age 85, both hemispheres 63.8
2029 Male, age 61, right hemisphere 52.4
1979 Male, age 74, unknown 51.6
Putamen
nTPM: 50.2
2482 Female, age 94, left hemisphere 58.9
1838 Male, age 80, right hemisphere 58.8
1937 Female, age 91, right hemisphere 56.3
2466 Female, age 79, unknown 52.9
1829 Male, age 74, unknown 45.0
2647 Male, age 75, left hemisphere 43.6
2489 Female, age 72, unknown 35.8
Septal nuclei
nTPM: 57.6
2031 Female, age 72, unknown 81.5
2009 Female, age 91, both hemispheres 68.5
1960 Male, age 74, unknown 67.8
2629 Female, age 94, right hemisphere 58.0
2199 Male, age 80, right hemisphere 49.2
2059 Female, age 85, both hemispheres 44.9
2394 Male, age 61, left hemisphere 33.6
Stria terminalis, bed nucleus
nTPM: 60.5
1974 Female, age 91, both hemispheres 73.2
2201 Male, age 74, unknown 55.9
2486 Female, age 94, both hemispheres 52.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 95.3
Samples: 246

Max nTPM: 196.2
Min nTPM: 55.0
Std nTPM: 24.2
Median nTPM: 91.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 196.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 190.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 184.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 173.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 171.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 153.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 152.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 148.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 147.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 145.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 144.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 143.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 141.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 140.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 135.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 135.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 134.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 134.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 133.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 132.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 131.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 129.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 128.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 127.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 126.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 124.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 123.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 120.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 118.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 118.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 116.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 115.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 115.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 114.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 113.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 113.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 113.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 113.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 113.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 112.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 112.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 111.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 111.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 110.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 110.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 110.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 110.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 109.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 109.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 108.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 107.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 107.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 107.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 107.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 107.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 106.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 105.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 105.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 105.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 105.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 104.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 104.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 104.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 104.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 104.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 104.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 103.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 103.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 103.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 103.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 103.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 102.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 102.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 102.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 102.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 102.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 101.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 101.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 101.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 101.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 100.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 100.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 100.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 100.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 99.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 99.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 98.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 98.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 97.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 97.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 97.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 97.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 96.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 96.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 95.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 95.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 95.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 95.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 95.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 95.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 94.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 94.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 94.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 94.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 94.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 94.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 94.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 94.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 93.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 93.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 93.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 93.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 93.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 93.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 92.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 92.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 92.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 91.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 91.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 90.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 90.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 90.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 90.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 90.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 89.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 89.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 89.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 89.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 89.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 89.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 88.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 88.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 88.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 87.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 87.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 87.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 86.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 86.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 86.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 86.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 86.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 86.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 86.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 86.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 85.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 85.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 85.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 85.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 85.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 84.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 84.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 84.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 84.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 84.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 83.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 82.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 82.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 82.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 82.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 82.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 82.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 81.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 81.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 81.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 81.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 81.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 81.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 80.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 80.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 79.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 76.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 76.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 76.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 76.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 76.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 75.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 75.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 75.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 74.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 74.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 74.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 74.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 74.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 74.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 73.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 73.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 73.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 73.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 72.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 72.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 72.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 72.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 71.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 70.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 70.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 69.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 68.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 68.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 67.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 67.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 66.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 66.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 66.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 65.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 65.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 63.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 63.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 62.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 62.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 58.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 57.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 56.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 55.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 107.6
Samples: 246

Max nTPM: 206.7
Min nTPM: 53.2
Std nTPM: 26.4
Median nTPM: 105.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 206.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 189.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 183.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 181.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 178.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 176.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 174.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 171.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 168.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 161.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 158.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 155.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 155.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 154.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 154.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 152.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 152.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 151.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 150.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 150.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 149.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 148.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 146.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 146.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 145.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 143.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 142.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 140.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 139.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 136.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 136.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 135.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 135.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 134.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 134.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 133.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 132.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 132.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 131.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 130.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 130.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 130.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 130.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 130.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 129.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 129.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 127.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 127.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 127.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 126.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 125.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 125.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 125.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 124.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 123.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 123.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 123.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 122.4
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 122.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 120.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 120.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 120.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 120.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 119.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 119.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 119.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 119.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 118.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 118.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 117.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 117.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 116.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 115.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 115.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 115.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 115.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 115.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 115.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 115.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 115.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 115.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 115.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 114.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 114.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 114.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 114.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 113.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 113.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 113.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 113.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 113.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 112.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 112.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 112.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 112.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 111.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 111.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 111.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 111.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 111.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 111.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 111.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 111.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 110.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 110.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 110.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 109.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 109.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 109.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 109.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 109.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 108.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 108.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 108.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 107.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 107.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 107.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 107.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 107.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 106.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 106.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 105.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 105.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 104.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 104.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 103.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 103.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 102.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 102.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 102.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 102.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 102.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 102.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 101.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 101.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 100.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 100.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 100.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 99.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 99.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 99.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 99.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 99.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 98.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 98.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 98.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 98.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 97.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 97.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 97.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 96.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 96.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 96.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 96.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 96.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 96.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 95.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 95.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 95.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 95.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 94.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 94.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 93.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 92.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 92.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 92.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 92.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 92.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 92.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 91.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 91.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 91.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 91.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 90.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 90.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 90.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 90.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 89.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 89.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 89.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 89.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 89.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 89.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 88.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 88.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 88.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 87.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 87.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 87.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 87.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 87.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 87.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 87.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 86.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 86.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 85.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 85.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 84.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 84.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 84.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 84.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 84.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 83.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 83.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 83.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 82.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 82.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 81.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 81.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 81.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 80.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 80.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 80.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 79.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 79.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 79.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 79.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 78.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 78.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 77.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 76.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 75.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 75.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 75.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 74.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 74.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 74.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 72.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 72.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 71.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 71.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 70.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 69.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 69.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 68.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 68.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 68.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 61.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 60.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 59.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 56.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 55.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 53.2
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Brain - Putamen (basal ganglia)
Average nTPM: 102.0
Samples: 205

Max nTPM: 186.4
Min nTPM: 57.8
Std nTPM: 25.3
Median nTPM: 98.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 186.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 185.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 176.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 164.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 164.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 161.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 159.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 157.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 153.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 153.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 152.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 151.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 150.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 147.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 140.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 139.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 139.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 139.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 137.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 136.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 135.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 135.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 133.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 132.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 132.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 130.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 129.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 128.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 128.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 127.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 127.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 126.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 126.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 125.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 124.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 122.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 122.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 122.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 121.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 121.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 121.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 120.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 120.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 120.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 120.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 118.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 118.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 117.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 117.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 117.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 116.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 116.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 116.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 116.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 115.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 115.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 115.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 114.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 114.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 114.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 114.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 112.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 111.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 110.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 110.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 109.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 109.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 109.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 109.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 107.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 107.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 107.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 107.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 106.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 105.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 105.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 104.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 104.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 104.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 104.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 104.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 103.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 102.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 102.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 102.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 102.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 100.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 100.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 100.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 99.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 99.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 99.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 99.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 98.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 98.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 98.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 98.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 98.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 98.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 98.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 97.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 97.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 97.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 97.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 97.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 97.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 96.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 96.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 96.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 96.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 96.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 95.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 94.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 94.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 94.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 93.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 93.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 93.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 93.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 93.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 93.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 93.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 93.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 92.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 92.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 92.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 91.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 91.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 91.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 91.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 91.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 91.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 90.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 89.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 89.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 89.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 89.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 88.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 88.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 87.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 87.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 87.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 86.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 86.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 86.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 85.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 85.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 85.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 85.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 84.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 83.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 82.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 81.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 80.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 80.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 80.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 80.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 80.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 80.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 79.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 79.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 78.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 77.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 76.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 76.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 76.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 75.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 74.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 74.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 74.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 73.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 72.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 70.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 70.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 70.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 70.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 70.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 69.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 68.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 68.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 67.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 67.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 66.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 64.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 64.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 63.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 63.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 61.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 60.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 59.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

88.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 88.7
FF:10164-103B2 76 years, female 88.7
Nucleus accumbens
Scaled Tags Per Million: 72.2
FF:10037-101F1 23-56 years, mixed 72.2
Putamen
Scaled Tags Per Million: 66.8
FF:10176-103C5 60 years, female 66.8
Globus pallidus
Scaled Tags Per Million: 61.9
FF:10175-103C4 60 years, female 74.5
FF:10161-103A8 76 years, female 49.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.7
Pig sample Sample description nTPM
Caudate
nTPM: 54.7
Samples: 4

Max nTPM: 62.7
Min nTPM: 45.5
Sample A Female 50.9
Sample B Female 59.7
Sample C Male 62.7
Sample D Male 45.5
Putamen
nTPM: 50.3
Samples: 4

Max nTPM: 61.7
Min nTPM: 41.3
Sample A Female 52.3
Sample B Female 41.3
Sample C Male 61.7
Sample D Male 45.8
Septum
nTPM: 54.4
Samples: 4

Max nTPM: 69.5
Min nTPM: 36.1
Sample A Female 69.5
Sample B Female 47.9
Sample C Male 63.9
Sample D Male 36.1
Ventral pallidum
nTPM: 53.5
Samples: 4

Max nTPM: 62.2
Min nTPM: 45.4
Sample A Female 55.5
Sample B Female 62.2
Sample C Male 51.0
Sample D Male 45.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

76.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 30.5
Samples: 4

Max nTPM: 33.1
Min nTPM: 27.9
Sample A Male 27.9
Sample B Male 28.9
Sample C Female 33.1
Sample D Female 32.1
Septum
nTPM: 76.0
Samples: 4

Max nTPM: 84.4
Min nTPM: 71.3
Sample A Male 72.9
Sample B Male 84.4
Sample C Female 75.3
Sample D Female 71.3
Ventral forebrain
nTPM: 50.6
Samples: 4

Max nTPM: 58.6
Min nTPM: 41.7
Sample A Male 47.4
Sample B Male 58.6
Sample C Female 54.8
Sample D Female 41.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
74357594 Antisense, RP_060117_01_A09, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.2
74357594 Antisense, RP_060117_01_A09, Mouse strain C57BL/6J (56 days, male) 0.2

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