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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.1 nTPM
GTEx:130.1 nTPM
FANTOM5:1.8 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB024920
Squamous epithelial cells Low



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 130.1
Samples: 156

Max nTPM: 869.6
Min nTPM: 0.2
Std nTPM: 153.3
Median nTPM: 68.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 869.6
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 577.4
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 556.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 485.1
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 471.6
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 457.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 446.0
GTEX-14PKU-1326-SM-6871B 40-49 years, female 435.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 409.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 409.4
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 405.6
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 395.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 392.5
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 380.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 359.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 358.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 344.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 335.9
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 301.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 289.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 287.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 286.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 284.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 277.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 275.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 273.5
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 273.2
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 268.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 266.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 261.0
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 257.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 256.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 254.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 253.7
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 253.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 252.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 234.4
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 232.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 229.0
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 222.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 222.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 212.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 204.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 204.6
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 199.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 196.8
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 186.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 179.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 174.3
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 172.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 171.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 170.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 168.9
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 166.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 163.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 162.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 154.8
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 146.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 141.6
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 139.3
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 138.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 134.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 129.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 127.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 116.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 109.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 109.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 109.4
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 107.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 104.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 103.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 93.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 81.8
GTEX-16NPV-2526-SM-6M483 50-59 years, female 80.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 76.8
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 74.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 70.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 68.9
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 67.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 67.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 64.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 60.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 55.0
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 53.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 50.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 48.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 42.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 42.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 40.5
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 40.1
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 38.0
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 37.4
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 35.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 33.6
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 31.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 30.2
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 20.7
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 14.4
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 14.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 13.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 12.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 9.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 8.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 8.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 7.5
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 7.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 6.9
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 6.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 5.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 5.0
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3.5
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 3.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 3.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 2.9
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2.5
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 2.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 2.3
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 2.1
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 1.9
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 1.5
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 1.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1.4
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 1.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 1.2
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1.0
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 1.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 0.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 0.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 0.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 0.8
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.7
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 0.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 0.7
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 0.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 0.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.6
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 0.5
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.5
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 0.5
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.2
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 1.8
FF:10204-103F6 68 years, female 1.8

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