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PSME3IP1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:70.8 nTPM
HPA Brain:140.7 nTPM
GTEx:70.8 nTPM
FANTOM5:82.3 Scaled Tags Per Million
Pig:49.6 nTPM
Mouse:41.7 nTPM
Allen mouse:2.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054382
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 105.6
2846 Female, age 79, unknown 116.5
2288 Male, age 75, left hemisphere 111.4
1781 Male, age 74, unknown 105.6
2289 Male, age 61, right hemisphere 105.6
1857 Female, age 85, left hemisphere 105.0
2290 Female, age 72, unknown 102.1
2481 Female, age 94, left hemisphere 101.0
1854 Male, age 80, left hemisphere 97.4
Globus pallidus, externus
nTPM: 140.7
2567 Female, age 72, unknown 153.4
2395 Male, age 75, both hemispheres 147.3
2646 Male, age 61, right hemisphere 139.9
1996 Male, age 80, right hemisphere 138.6
2772 Female, age 79, unknown 124.2
Globus pallidus, internus
nTPM: 137.0
2566 Female, age 72, unknown 154.9
2483 Female, age 94, right hemisphere 143.0
2111 Female, age 85, right hemisphere 137.1
2287 Male, age 75, right hemisphere 136.7
2778 Female, age 91, both hemispheres 133.3
2037 Male, age 80, right hemisphere 129.6
1818 Male, age 74, unknown 124.5
Nucleus accumbens
nTPM: 110.2
2698 Female, age 72, unknown 127.0
2391 Female, age 94, left hemisphere 114.4
2732 Male, age 80, right hemisphere 110.0
2286 Male, age 75, left hemisphere 109.4
2824 Male, age 61, right hemisphere 108.8
1806 Female, age 85, left hemisphere 107.6
1783 Male, age 74, unknown 105.6
1856 Female, age 91, right hemisphere 99.2
Nucleus basalis of Meynert
nTPM: 119.6
2569 Male, age 61, both hemispheres 142.6
2821 Male, age 75, both hemispheres 125.0
2484 Female, age 94, left hemisphere 108.1
2393 Male, age 80, right hemisphere 102.7
Nucleus of the diagonal band
nTPM: 98.6
1812 Female, age 91, both hemispheres 109.6
1979 Male, age 74, unknown 108.1
2029 Male, age 61, right hemisphere 93.8
2775 Male, age 80, right hemisphere 91.7
2195 Female, age 85, both hemispheres 89.9
Putamen
nTPM: 111.0
2647 Male, age 75, left hemisphere 118.9
1829 Male, age 74, unknown 118.0
1937 Female, age 91, right hemisphere 115.8
2482 Female, age 94, left hemisphere 112.2
2489 Female, age 72, unknown 111.5
2466 Female, age 79, unknown 106.4
1838 Male, age 80, right hemisphere 93.9
Septal nuclei
nTPM: 101.2
2629 Female, age 94, right hemisphere 106.7
2031 Female, age 72, unknown 106.1
2199 Male, age 80, right hemisphere 104.3
1960 Male, age 74, unknown 100.7
2059 Female, age 85, both hemispheres 99.2
2394 Male, age 61, left hemisphere 97.6
2009 Female, age 91, both hemispheres 93.7
Stria terminalis, bed nucleus
nTPM: 98.0
1974 Female, age 91, both hemispheres 104.1
2201 Male, age 74, unknown 102.8
2486 Female, age 94, both hemispheres 87.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 67.2
Samples: 246

Max nTPM: 109.2
Min nTPM: 48.9
Std nTPM: 9.2
Median nTPM: 65.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 109.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 105.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 89.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 87.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 85.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 85.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 85.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 84.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 83.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 83.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 83.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 82.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 81.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 81.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 80.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 80.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 80.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 79.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 79.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 78.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 78.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 78.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 78.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 78.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 77.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 76.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 76.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 76.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 75.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 74.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 74.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 73.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 73.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 73.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 73.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 73.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 73.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 72.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 72.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 72.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 72.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 72.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 71.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 71.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 71.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 70.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 70.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 70.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 70.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 70.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 70.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 70.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 70.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 70.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 70.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 70.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 70.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 70.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 69.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 69.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 69.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 68.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 68.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 68.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 68.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 68.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 67.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 67.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 67.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 67.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 67.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 67.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 66.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 66.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 66.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 66.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 66.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 66.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 66.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 66.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 66.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 66.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 66.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 66.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 66.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 65.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 65.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 65.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 65.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 65.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 65.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 65.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 65.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 65.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 65.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 65.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 65.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 64.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 64.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 64.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 64.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 64.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 64.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 64.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 64.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 64.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 63.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 63.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 63.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 63.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 63.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 62.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 62.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 62.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 62.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 62.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 62.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 62.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 62.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 62.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 62.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 62.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 62.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 62.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 61.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 61.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 61.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 61.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 61.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 61.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 61.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 61.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 60.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 60.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 60.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 60.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 60.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 60.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 60.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 60.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 60.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 59.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 59.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 59.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 59.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 59.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 59.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 59.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 59.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 59.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 58.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 58.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 58.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 58.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 58.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 57.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 57.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 56.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 55.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 55.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 54.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 54.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 54.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 53.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 53.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 52.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 52.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 51.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 51.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 70.8
Samples: 246

Max nTPM: 108.4
Min nTPM: 43.4
Std nTPM: 11.4
Median nTPM: 70.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 108.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 101.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 100.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 100.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 99.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 98.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 96.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 95.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 94.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 93.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 91.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 90.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 90.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 89.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 89.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 88.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 88.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 88.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 88.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 87.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 87.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 86.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 86.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 86.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 85.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 85.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 85.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 85.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 84.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 84.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 84.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 83.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 83.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 83.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 83.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 82.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 82.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 81.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 81.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 81.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 81.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 81.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 81.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 81.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 80.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 80.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 80.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 80.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 79.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 79.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 79.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 79.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 79.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 79.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 79.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 79.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 79.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 78.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 78.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 78.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 78.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 78.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 77.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 77.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 77.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 77.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 77.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 77.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 77.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 76.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 76.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 75.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 75.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 75.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 75.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 75.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 75.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 74.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 74.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 74.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 74.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 74.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 74.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 74.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 74.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 74.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 74.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 74.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 73.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 73.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 73.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 73.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 73.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 72.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 72.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 72.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 72.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 72.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 72.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 72.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 72.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 71.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 71.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 71.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 71.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 71.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 70.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 70.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 70.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 70.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 70.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 70.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 70.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 70.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 70.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 69.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 69.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 69.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 69.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 69.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 69.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 69.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 69.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 69.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 68.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 68.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 68.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 68.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 68.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 67.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 67.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 67.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 67.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 66.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 66.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 66.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 66.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 66.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 66.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 65.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 65.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 65.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 65.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 65.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 65.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 65.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 65.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 65.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 64.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 64.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 64.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 64.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 64.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 64.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 63.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 63.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 63.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 63.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 63.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 63.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 63.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 63.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 62.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 62.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 62.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 62.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 62.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 62.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 62.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 62.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 62.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 62.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 61.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 61.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 61.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 61.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 61.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 60.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 60.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 60.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 60.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 60.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 60.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 60.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 60.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 60.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 60.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 60.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 60.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 60.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 59.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 59.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 59.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 59.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 59.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 59.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 58.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 58.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 58.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 58.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 58.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 58.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 57.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 57.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 56.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 56.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 56.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 56.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 55.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 54.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 54.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 54.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 52.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 51.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 50.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 50.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 48.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 48.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 45.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 43.4
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Brain - Putamen (basal ganglia)
Average nTPM: 70.8
Samples: 205

Max nTPM: 115.3
Min nTPM: 49.5
Std nTPM: 9.3
Median nTPM: 70.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 115.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 107.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 106.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 100.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 92.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 91.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 91.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 90.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 89.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 87.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 86.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 83.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 83.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 83.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 82.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 82.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 82.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 82.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 81.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 80.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 80.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 80.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 79.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 79.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 79.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 78.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 78.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 78.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 77.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 77.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 77.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 77.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 76.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 76.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 76.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 76.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 76.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 76.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 76.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 76.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 76.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 75.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 75.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 75.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 75.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 75.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 75.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 75.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 74.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 74.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 74.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 74.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 74.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 74.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 74.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 73.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 73.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 73.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 73.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 73.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 73.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 73.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 73.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 73.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 73.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 72.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 72.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 72.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 72.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 72.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 72.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 72.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 72.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 72.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 72.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 71.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 71.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 71.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 71.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 71.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 71.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 71.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 70.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 70.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 70.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 70.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 70.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 70.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 70.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 70.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 69.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 69.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 69.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 69.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 69.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 69.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 69.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 69.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 69.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 68.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 68.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 68.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 68.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 68.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 67.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 67.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 67.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 67.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 67.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 67.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 67.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 67.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 67.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 67.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 67.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 67.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 66.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 66.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 66.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 66.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 66.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 65.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 65.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 65.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 65.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 65.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 65.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 65.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 65.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 65.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 65.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 65.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 65.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 64.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 64.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 64.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 64.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 64.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 64.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 64.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 64.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 64.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 63.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 63.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 63.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 63.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 63.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 63.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 63.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 62.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 62.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 62.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 61.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 61.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 61.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 60.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 59.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 58.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 58.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 57.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 57.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 56.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 56.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 55.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 55.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 54.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 54.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 51.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 50.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 49.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 66.0
FF:10164-103B2 76 years, female 66.0
Nucleus accumbens
Scaled Tags Per Million: 68.3
FF:10037-101F1 23-56 years, mixed 68.3
Putamen
Scaled Tags Per Million: 82.3
FF:10176-103C5 60 years, female 82.3
Globus pallidus
Scaled Tags Per Million: 70.0
FF:10161-103A8 76 years, female 73.3
FF:10175-103C4 60 years, female 66.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.6
Pig sample Sample description nTPM
Caudate
nTPM: 41.4
Samples: 4

Max nTPM: 46.1
Min nTPM: 38.6
Sample A Female 38.6
Sample B Female 41.4
Sample C Male 46.1
Sample D Male 39.6
Putamen
nTPM: 49.6
Samples: 4

Max nTPM: 61.4
Min nTPM: 41.5
Sample A Female 48.4
Sample B Female 41.5
Sample C Male 61.4
Sample D Male 47.1
Septum
nTPM: 43.3
Samples: 4

Max nTPM: 46.8
Min nTPM: 39.1
Sample A Female 46.8
Sample B Female 42.1
Sample C Male 45.1
Sample D Male 39.1
Ventral pallidum
nTPM: 42.7
Samples: 4

Max nTPM: 46.2
Min nTPM: 40.8
Sample A Female 41.2
Sample B Female 46.2
Sample C Male 42.5
Sample D Male 40.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 40.1
Samples: 4

Max nTPM: 44.2
Min nTPM: 33.8
Sample A Male 44.2
Sample B Male 41.1
Sample C Female 33.8
Sample D Female 41.4
Septum
nTPM: 41.7
Samples: 4

Max nTPM: 44.7
Min nTPM: 37.8
Sample A Male 44.5
Sample B Male 44.7
Sample C Female 37.8
Sample D Female 39.7
Ventral forebrain
nTPM: 39.2
Samples: 4

Max nTPM: 44.6
Min nTPM: 34.7
Sample A Male 34.7
Sample B Male 39.1
Sample C Female 38.4
Sample D Female 44.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.5
583573 Antisense, RP_040831_02_G01, Mouse strain C57BL/6J (56 days, male) 2.5
Pallidum
Expression energy: 2.0
583573 Antisense, RP_040831_02_G01, Mouse strain C57BL/6J (56 days, male) 2.0

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