We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DCAKD
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • DCAKD
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:42.2 nTPM
HPA Brain:84.0 nTPM
GTEx:42.2 nTPM
FANTOM5:89.4 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:35.2 nTPM
Allen mouse:0.2 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.3
2481 Female, age 94, left hemisphere 78.2
2290 Female, age 72, unknown 73.5
2289 Male, age 61, right hemisphere 70.9
1854 Male, age 80, left hemisphere 65.9
2288 Male, age 75, left hemisphere 61.4
1857 Female, age 85, left hemisphere 60.3
1781 Male, age 74, unknown 59.5
2846 Female, age 79, unknown 52.7
Globus pallidus, externus
nTPM: 84.0
2646 Male, age 61, right hemisphere 100.7
1996 Male, age 80, right hemisphere 94.8
2772 Female, age 79, unknown 78.9
2567 Female, age 72, unknown 75.3
2395 Male, age 75, both hemispheres 70.3
Globus pallidus, internus
nTPM: 78.5
2483 Female, age 94, right hemisphere 99.7
2037 Male, age 80, right hemisphere 91.1
1818 Male, age 74, unknown 78.7
2287 Male, age 75, right hemisphere 74.7
2566 Female, age 72, unknown 71.7
2778 Female, age 91, both hemispheres 67.5
2111 Female, age 85, right hemisphere 66.2
Nucleus accumbens
nTPM: 63.8
2732 Male, age 80, right hemisphere 75.6
1783 Male, age 74, unknown 65.5
1806 Female, age 85, left hemisphere 63.7
1856 Female, age 91, right hemisphere 63.5
2286 Male, age 75, left hemisphere 62.3
2824 Male, age 61, right hemisphere 61.2
2698 Female, age 72, unknown 60.3
2391 Female, age 94, left hemisphere 58.0
Nucleus basalis of Meynert
nTPM: 70.5
2569 Male, age 61, both hemispheres 103.5
2393 Male, age 80, right hemisphere 64.5
2484 Female, age 94, left hemisphere 63.3
2821 Male, age 75, both hemispheres 51.0
Nucleus of the diagonal band
nTPM: 67.0
1979 Male, age 74, unknown 76.7
2775 Male, age 80, right hemisphere 69.9
1812 Female, age 91, both hemispheres 65.7
2195 Female, age 85, both hemispheres 63.3
2029 Male, age 61, right hemisphere 59.5
Putamen
nTPM: 65.0
2489 Female, age 72, unknown 69.8
2482 Female, age 94, left hemisphere 69.5
2647 Male, age 75, left hemisphere 65.3
1829 Male, age 74, unknown 64.8
2466 Female, age 79, unknown 63.0
1838 Male, age 80, right hemisphere 61.7
1937 Female, age 91, right hemisphere 60.9
Septal nuclei
nTPM: 66.0
2199 Male, age 80, right hemisphere 75.5
2059 Female, age 85, both hemispheres 72.2
2394 Male, age 61, left hemisphere 70.3
2009 Female, age 91, both hemispheres 67.4
1960 Male, age 74, unknown 63.5
2031 Female, age 72, unknown 58.8
2629 Female, age 94, right hemisphere 54.5
Stria terminalis, bed nucleus
nTPM: 68.6
2201 Male, age 74, unknown 81.3
1974 Female, age 91, both hemispheres 65.1
2486 Female, age 94, both hemispheres 59.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.2
Samples: 246

Max nTPM: 92.8
Min nTPM: 17.6
Std nTPM: 10.5
Median nTPM: 40.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 92.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 83.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 71.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 66.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 66.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 65.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 63.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 61.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 61.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 58.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 57.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 57.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 55.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 54.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 54.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 54.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 54.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 54.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 53.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 52.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 52.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 52.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 50.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 50.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 50.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 50.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 49.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 49.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 49.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 49.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 48.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 48.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 48.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 48.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 47.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 47.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 47.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 47.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 47.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 46.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 46.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 46.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 46.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 45.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 45.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 45.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 45.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 45.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 45.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 45.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 45.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 44.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 44.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 44.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 44.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 44.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 44.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 44.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 44.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 44.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 44.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 44.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 43.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 43.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 43.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 43.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 43.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 43.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 42.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 41.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 41.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 41.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 41.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 41.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 41.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 41.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 40.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 40.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 40.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 40.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 40.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 40.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 39.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 39.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 39.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 39.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 39.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 39.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 38.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 38.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 38.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 38.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 38.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 37.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 37.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 37.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 37.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 37.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 37.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 37.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 37.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 37.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 37.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 36.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 36.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 36.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 36.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 36.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 36.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 36.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 36.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 36.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 36.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 36.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 36.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 36.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 35.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 35.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 35.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 35.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 34.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 34.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 34.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 34.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 34.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 34.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 34.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 34.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 34.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 33.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 33.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 33.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 33.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 32.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 32.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 32.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 32.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 32.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 32.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 32.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 32.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 31.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 31.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 31.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 31.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 31.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 31.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 30.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 30.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 30.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 30.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 30.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 30.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 30.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 30.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 29.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 29.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 29.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 28.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 28.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 27.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 27.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 27.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 27.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 27.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 24.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 24.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 19.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 19.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 17.6
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 41.3
Samples: 246

Max nTPM: 97.6
Min nTPM: 20.7
Std nTPM: 9.6
Median nTPM: 39.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 97.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 76.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 69.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 69.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 67.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 66.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 65.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 64.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 63.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 59.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 58.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 58.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 57.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 57.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 56.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 55.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 54.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 54.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 53.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 53.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 52.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 52.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 52.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 51.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 51.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 51.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 51.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 50.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 50.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 50.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 49.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 49.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 49.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 49.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 49.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 49.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 48.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 47.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 47.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 47.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 47.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 47.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 47.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 47.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 46.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 45.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 45.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 45.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 45.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 45.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 44.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 44.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 44.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 44.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 44.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 44.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 44.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 44.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 44.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 44.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 43.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 43.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 43.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 43.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 43.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 43.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 43.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 43.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 43.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 43.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 43.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 43.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 43.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 42.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 42.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 42.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 42.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 41.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 41.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 41.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 41.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 41.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 41.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 41.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 41.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 41.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 40.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 40.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 40.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 40.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 40.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 40.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 40.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 40.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 39.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 39.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 39.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 39.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 39.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 39.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 39.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 39.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 39.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 39.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 39.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 39.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 39.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 39.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 38.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 38.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 38.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 38.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 38.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 38.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 38.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 38.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 38.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 38.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 38.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 38.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 38.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 38.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 38.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 37.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 37.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 37.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 37.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 37.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 37.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 37.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 37.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 37.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 37.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 37.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 37.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 36.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 36.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 36.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 36.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 36.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 36.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 36.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 36.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 36.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 36.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 36.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 36.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 36.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 36.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 36.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 35.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 35.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 35.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 35.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 35.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 35.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 35.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 35.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 35.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 34.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 34.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 34.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 34.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 34.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 34.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 34.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 34.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 34.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 34.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 34.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 34.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 33.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 33.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 33.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 33.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 33.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 33.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 33.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 33.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 33.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 33.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 32.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 32.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 32.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 31.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 31.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 31.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 31.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 31.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 31.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 31.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 31.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 30.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 30.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 30.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 30.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 28.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 28.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 28.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 28.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 28.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 28.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 28.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 27.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 25.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 25.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 25.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 25.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 25.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 24.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 20.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 40.4
Samples: 205

Max nTPM: 95.1
Min nTPM: 18.7
Std nTPM: 11.9
Median nTPM: 38.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 95.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 91.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 88.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 83.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 68.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 67.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 66.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 66.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 66.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 65.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 64.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 58.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 58.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 57.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 55.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 54.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 54.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 53.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 52.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 52.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 52.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 52.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 52.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 52.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 51.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 51.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 50.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 50.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 50.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 49.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 49.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 49.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 49.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 48.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 48.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 47.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 47.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 47.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 46.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 46.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 46.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 46.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 46.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 45.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 45.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 44.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 44.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 44.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 44.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 44.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 43.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 43.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 43.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 42.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 42.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 42.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 42.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 42.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 42.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 41.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 41.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 41.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 41.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 41.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 41.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 40.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 40.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 40.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 40.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 40.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 40.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 39.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 39.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 39.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 39.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 39.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 39.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 38.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 38.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 38.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 38.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 38.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 38.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 38.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 38.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 38.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 37.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 37.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 37.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 37.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 37.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 36.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 36.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 36.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 36.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 36.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 36.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 36.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 36.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 36.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 36.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 35.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 35.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 35.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 35.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 35.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 35.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 35.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 35.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 34.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 34.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 34.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 34.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 34.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 33.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 33.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 33.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 33.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 33.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 33.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 33.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 32.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 32.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 32.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 32.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 32.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 31.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 31.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 30.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 30.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 30.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 30.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 29.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 29.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 29.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 29.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 29.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 29.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 29.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 29.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 28.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 28.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 28.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 28.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 28.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 28.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 28.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 28.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 28.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 27.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 27.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 27.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 27.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 27.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 27.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 26.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 26.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 26.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 26.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 26.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 26.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 25.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 24.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 23.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 21.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 20.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 18.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 87.1
FF:10164-103B2 76 years, female 87.1
Nucleus accumbens
Scaled Tags Per Million: 89.4
FF:10037-101F1 23-56 years, mixed 89.4
Putamen
Scaled Tags Per Million: 79.6
FF:10176-103C5 60 years, female 79.6
Globus pallidus
Scaled Tags Per Million: 66.3
FF:10161-103A8 76 years, female 83.2
FF:10175-103C4 60 years, female 49.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.2
Pig sample Sample description nTPM
Caudate
nTPM: 21.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.1
Sample A Female 18.1
Sample B Female 18.9
Sample C Male 29.7
Sample D Male 19.0
Putamen
nTPM: 22.2
Samples: 4

Max nTPM: 26.7
Min nTPM: 13.9
Sample A Female 22.2
Sample B Female 13.9
Sample C Male 26.7
Sample D Male 26.0
Septum
nTPM: 19.5
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.4
Sample A Female 18.5
Sample B Female 14.4
Sample C Male 21.7
Sample D Male 23.4
Ventral pallidum
nTPM: 19.1
Samples: 4

Max nTPM: 26.0
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 16.3
Sample C Male 26.0
Sample D Male 19.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 29.0
Samples: 4

Max nTPM: 32.0
Min nTPM: 25.7
Sample A Male 27.5
Sample B Male 32.0
Sample C Female 25.7
Sample D Female 30.9
Septum
nTPM: 31.0
Samples: 4

Max nTPM: 33.4
Min nTPM: 28.1
Sample A Male 33.4
Sample B Male 28.1
Sample C Female 31.7
Sample D Female 30.6
Ventral forebrain
nTPM: 35.2
Samples: 4

Max nTPM: 40.0
Min nTPM: 29.9
Sample A Male 31.3
Sample B Male 29.9
Sample C Female 40.0
Sample D Female 39.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
68861698 Antisense, RP_050224_02_G07, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.1
68861698 Antisense, RP_050224_02_G07, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org