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ARPP21
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:734.8 nTPM
HPA Brain:619.4 nTPM
GTEx:734.8 nTPM
FANTOM5:2410.6 Scaled Tags Per Million
Pig:1242.8 nTPM
Mouse:52.9 nTPM
Allen mouse:18.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA017303
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

619.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 525.4
1857 Female, age 85, left hemisphere 773.1
1854 Male, age 80, left hemisphere 722.6
2290 Female, age 72, unknown 702.1
2846 Female, age 79, unknown 689.3
1781 Male, age 74, unknown 572.5
2289 Male, age 61, right hemisphere 307.4
2288 Male, age 75, left hemisphere 288.7
2481 Female, age 94, left hemisphere 147.6
Globus pallidus, externus
nTPM: 62.0
2395 Male, age 75, both hemispheres 73.4
2567 Female, age 72, unknown 66.8
2646 Male, age 61, right hemisphere 65.8
1996 Male, age 80, right hemisphere 60.0
2772 Female, age 79, unknown 44.1
Globus pallidus, internus
nTPM: 58.9
2483 Female, age 94, right hemisphere 132.3
2287 Male, age 75, right hemisphere 63.2
2566 Female, age 72, unknown 55.3
1818 Male, age 74, unknown 54.6
2037 Male, age 80, right hemisphere 47.7
2778 Female, age 91, both hemispheres 33.6
2111 Female, age 85, right hemisphere 25.6
Nucleus accumbens
nTPM: 619.4
1856 Female, age 91, right hemisphere 1169.5
1783 Male, age 74, unknown 1120.7
2824 Male, age 61, right hemisphere 727.4
1806 Female, age 85, left hemisphere 712.1
2698 Female, age 72, unknown 597.3
2286 Male, age 75, left hemisphere 298.8
2732 Male, age 80, right hemisphere 187.5
2391 Female, age 94, left hemisphere 141.9
Nucleus basalis of Meynert
nTPM: 269.7
2393 Male, age 80, right hemisphere 598.6
2484 Female, age 94, left hemisphere 218.5
2821 Male, age 75, both hemispheres 189.8
2569 Male, age 61, both hemispheres 72.1
Nucleus of the diagonal band
nTPM: 139.8
1812 Female, age 91, both hemispheres 182.7
2029 Male, age 61, right hemisphere 141.6
2775 Male, age 80, right hemisphere 140.5
2195 Female, age 85, both hemispheres 135.4
1979 Male, age 74, unknown 99.1
Putamen
nTPM: 596.4
1838 Male, age 80, right hemisphere 929.4
1829 Male, age 74, unknown 869.0
1937 Female, age 91, right hemisphere 844.2
2466 Female, age 79, unknown 693.6
2489 Female, age 72, unknown 434.8
2647 Male, age 75, left hemisphere 212.1
2482 Female, age 94, left hemisphere 191.8
Septal nuclei
nTPM: 114.1
2031 Female, age 72, unknown 162.2
2629 Female, age 94, right hemisphere 160.4
2009 Female, age 91, both hemispheres 135.6
1960 Male, age 74, unknown 131.7
2059 Female, age 85, both hemispheres 86.5
2394 Male, age 61, left hemisphere 84.9
2199 Male, age 80, right hemisphere 37.4
Stria terminalis, bed nucleus
nTPM: 135.8
2486 Female, age 94, both hemispheres 197.7
1974 Female, age 91, both hemispheres 153.1
2201 Male, age 74, unknown 56.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

734.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 508.8
Samples: 246

Max nTPM: 1918.1
Min nTPM: 3.8
Std nTPM: 336.3
Median nTPM: 437.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1918.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1818.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1411.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1405.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1252.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1252.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1211.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1194.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1164.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1146.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1139.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1128.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1119.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1114.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1077.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1066.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1063.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1058.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1055.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1054.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1041.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 996.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 962.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 962.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 957.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 955.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 944.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 942.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 932.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 931.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 924.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 913.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 911.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 906.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 900.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 898.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 888.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 874.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 870.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 820.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 818.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 813.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 800.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 796.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 791.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 789.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 784.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 776.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 774.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 768.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 767.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 756.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 751.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 741.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 737.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 730.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 730.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 727.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 722.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 722.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 720.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 720.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 718.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 716.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 698.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 694.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 694.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 693.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 693.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 678.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 674.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 674.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 667.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 667.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 661.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 660.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 658.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 657.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 653.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 650.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 649.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 646.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 640.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 639.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 630.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 629.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 626.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 617.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 599.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 598.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 588.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 587.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 576.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 575.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 574.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 566.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 564.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 557.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 555.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 544.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 537.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 531.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 528.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 524.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 521.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 519.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 514.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 512.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 511.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 508.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 504.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 492.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 491.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 490.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 478.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 474.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 474.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 463.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 453.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 447.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 445.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 439.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 438.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 436.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 436.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 432.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 430.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 426.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 423.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 417.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 414.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 413.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 411.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 411.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 410.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 407.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 405.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 404.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 403.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 397.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 396.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 389.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 385.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 383.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 381.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 380.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 380.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 374.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 370.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 368.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 368.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 365.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 360.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 355.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 352.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 348.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 345.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 345.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 342.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 340.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 340.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 336.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 325.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 322.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 318.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 313.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 312.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 312.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 307.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 306.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 303.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 300.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 285.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 281.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 274.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 265.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 254.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 249.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 240.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 236.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 235.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 234.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 233.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 229.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 229.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 226.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 225.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 219.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 215.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 215.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 211.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 203.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 203.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 200.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 200.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 198.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 198.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 195.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 191.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 189.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 189.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 178.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 172.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 171.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 170.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 164.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 164.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 163.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 162.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 155.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 152.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 150.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 144.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 138.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 130.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 128.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 127.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 123.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 123.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 120.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 119.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 116.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 115.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 103.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 101.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 100.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 96.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 91.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 83.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 79.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 77.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 75.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 66.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 65.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 40.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 3.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 734.8
Samples: 246

Max nTPM: 1870.8
Min nTPM: 4.1
Std nTPM: 408.7
Median nTPM: 724.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 1870.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1846.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1747.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1533.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1513.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1505.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 1474.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1466.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1430.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1405.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1393.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1391.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1389.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 1389.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1371.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1370.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1348.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1345.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 1345.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 1322.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 1314.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 1285.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1280.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1257.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1254.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1251.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1248.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 1246.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1234.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 1224.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1205.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1199.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1198.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 1186.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1183.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1178.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1155.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1149.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 1141.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1134.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 1133.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 1131.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1126.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 1124.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1115.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 1114.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1110.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 1106.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 1097.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1094.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 1092.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1089.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1084.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 1083.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 1082.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1074.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1071.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1069.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1060.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 1059.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1049.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1047.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1039.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 1038.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1037.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 1037.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1037.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1034.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 1032.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 1027.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1024.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1006.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 1003.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 998.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 991.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 987.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 986.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 983.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 980.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 973.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 972.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 966.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 948.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 945.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 927.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 923.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 922.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 920.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 918.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 915.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 915.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 905.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 904.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 899.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 888.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 882.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 882.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 878.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 860.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 859.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 857.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 856.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 844.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 844.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 841.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 839.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 826.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 819.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 814.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 803.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 793.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 769.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 768.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 768.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 768.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 763.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 752.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 752.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 742.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 739.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 738.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 729.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 726.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 723.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 714.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 714.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 708.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 708.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 706.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 706.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 698.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 693.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 687.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 687.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 680.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 675.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 668.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 665.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 662.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 659.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 656.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 655.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 652.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 640.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 639.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 637.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 637.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 636.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 635.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 614.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 605.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 598.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 598.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 591.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 584.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 577.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 575.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 570.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 559.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 559.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 556.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 556.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 551.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 545.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 539.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 538.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 534.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 530.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 526.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 522.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 511.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 491.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 476.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 468.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 464.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 450.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 447.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 445.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 431.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 428.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 428.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 411.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 397.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 397.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 375.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 367.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 361.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 359.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 333.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 332.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 332.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 330.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 329.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 324.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 317.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 317.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 314.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 297.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 294.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 292.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 285.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 284.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 277.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 276.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 275.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 257.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 257.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 255.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 249.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 243.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 240.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 239.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 237.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 234.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 232.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 229.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 227.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 215.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 214.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 205.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 187.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 183.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 177.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 174.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 171.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 160.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 154.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 141.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 124.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 122.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 112.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 110.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 105.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 92.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 71.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 65.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 56.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 53.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 45.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 42.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 29.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 21.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 20.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 4.1
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Brain - Putamen (basal ganglia)
Average nTPM: 467.5
Samples: 205

Max nTPM: 1690.4
Min nTPM: 38.4
Std nTPM: 301.2
Median nTPM: 436.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 1690.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 1197.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1193.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1161.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 1153.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 1089.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 1055.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 1036.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 1032.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 992.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 982.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 979.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 971.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 971.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 968.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 965.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 944.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 934.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 927.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 914.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 914.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 905.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 891.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 882.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 879.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 877.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 867.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 844.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 844.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 831.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 805.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 778.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 773.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 769.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 757.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 757.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 755.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 750.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 748.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 746.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 739.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 722.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 706.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 691.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 684.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 680.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 679.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 678.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 676.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 674.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 672.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 671.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 662.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 656.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 652.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 651.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 645.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 644.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 640.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 639.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 626.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 619.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 617.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 611.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 604.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 601.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 583.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 577.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 576.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 557.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 556.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 549.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 548.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 548.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 538.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 537.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 531.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 524.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 515.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 510.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 507.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 506.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 503.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 501.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 497.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 488.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 479.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 478.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 476.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 469.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 469.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 467.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 466.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 461.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 460.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 451.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 448.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 448.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 443.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 439.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 439.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 439.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 436.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 429.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 419.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 418.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 416.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 411.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 411.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 391.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 387.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 386.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 382.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 378.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 376.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 376.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 374.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 368.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 365.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 359.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 358.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 349.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 347.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 344.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 343.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 341.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 324.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 324.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 321.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 321.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 307.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 305.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 304.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 300.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 298.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 295.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 284.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 280.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 278.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 275.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 272.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 271.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 260.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 260.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 253.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 253.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 253.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 249.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 246.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 234.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 231.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 229.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 227.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 220.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 218.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 218.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 205.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 195.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 180.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 179.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 177.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 177.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 174.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 170.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 167.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 165.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 158.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 158.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 156.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 151.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 144.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 144.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 141.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 140.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 137.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 135.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 131.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 130.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 129.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 117.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 115.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 112.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 111.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 111.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 110.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 109.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 107.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 106.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 102.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 98.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 95.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 94.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 82.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 78.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 74.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 59.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 57.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 53.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 49.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 43.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 38.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2410.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1573.3
FF:10164-103B2 76 years, female 1573.3
Nucleus accumbens
Scaled Tags Per Million: 908.2
FF:10037-101F1 23-56 years, mixed 908.2
Putamen
Scaled Tags Per Million: 2410.6
FF:10176-103C5 60 years, female 2410.6
Globus pallidus
Scaled Tags Per Million: 435.9
FF:10175-103C4 60 years, female 700.8
FF:10161-103A8 76 years, female 171.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1242.8
Pig sample Sample description nTPM
Caudate
nTPM: 1226.1
Samples: 4

Max nTPM: 1428.5
Min nTPM: 1086.6
Sample A Female 1086.6
Sample B Female 1134.7
Sample C Male 1428.5
Sample D Male 1254.4
Putamen
nTPM: 1242.8
Samples: 4

Max nTPM: 1952.7
Min nTPM: 422.2
Sample A Female 422.2
Sample B Female 1286.2
Sample C Male 1952.7
Sample D Male 1310.2
Septum
nTPM: 356.6
Samples: 4

Max nTPM: 788.0
Min nTPM: 16.9
Sample A Female 788.0
Sample B Female 586.8
Sample C Male 16.9
Sample D Male 34.5
Ventral pallidum
nTPM: 715.9
Samples: 4

Max nTPM: 1242.6
Min nTPM: 105.8
Sample A Female 1242.6
Sample B Female 662.2
Sample C Male 105.8
Sample D Male 852.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.3
Samples: 4

Max nTPM: 51.4
Min nTPM: 38.4
Sample A Male 38.4
Sample B Male 39.5
Sample C Female 51.4
Sample D Female 44.0
Septum
nTPM: 21.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 15.3
Sample A Male 30.6
Sample B Male 17.7
Sample C Female 20.9
Sample D Female 15.3
Ventral forebrain
nTPM: 52.9
Samples: 4

Max nTPM: 62.0
Min nTPM: 40.3
Sample A Male 62.0
Sample B Male 40.3
Sample C Female 47.9
Sample D Female 61.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 18.4
71587781 Antisense, RP_050725_02_D09, Mouse strain C57BL/6J (56 days, male) 23.2
68148752 Antisense, RP_041116_02_B04, Mouse strain C57BL/6J (56 days, male) 20.9
79567762 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 10.9
79677353 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 6.6
Pallidum
Expression energy: 5.4
68148752 Antisense, RP_041116_02_B04, Mouse strain C57BL/6J (56 days, male) 5.9
79567762 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 5.5
71587781 Antisense, RP_050725_02_D09, Mouse strain C57BL/6J (56 days, male) 4.9
79677353 Antisense, RP_071204_02_A07, Mouse strain C57BL/6J (56 days, male) 3.1

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