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ADAMTS20
HPA
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  • SUMMARY

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  • ADAMTS20
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ADAMTS20
Synonyms GON-1
Gene descriptioni

Full gene name according to HGNC.

ADAM metallopeptidase with thrombospondin type 1 motif 20
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q12
Chromosome location (bp) 43353866 - 43552203
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000173157 (version 109)
Entrez gene 80070
HGNC HGNC:17178
UniProt P59510 (UniProt - Evidence at transcript level)
neXtProt NX_P59510
GeneCards ADAMTS20
Antibodypedia ADAMTS20 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May play a role in tissue-remodeling process occurring in both normal and pathological conditions. May have a protease-independent function in the transport from the endoplasmic reticulum to the Golgi apparatus of secretory cargos, mediated by the GON domain.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Metalloprotease, Protease
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the ADAMTS family of zinc-dependent proteases. The encoded protein has a signal peptide that is cleaved to release the mature peptide, which is secreted and found in the extracellular matrix. This protein may be involved in tissue remodeling. [provided by RefSeq, Sep 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ADAMTS20-201
ENSP00000374071
ENST00000389420
P59510
[Direct mapping] A disintegrin and metalloproteinase with thrombospondin motifs 20
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0004175 [endopeptidase activity]
GO:0004222 [metalloendopeptidase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006508 [proteolysis]
GO:0006915 [apoptotic process]
GO:0007165 [signal transduction]
GO:0008233 [peptidase activity]
GO:0008237 [metallopeptidase activity]
GO:0008270 [zinc ion binding]
GO:0009967 [positive regulation of signal transduction]
GO:0016787 [hydrolase activity]
GO:0030198 [extracellular matrix organization]
GO:0030318 [melanocyte differentiation]
GO:0031012 [extracellular matrix]
GO:0043066 [negative regulation of apoptotic process]
GO:0045636 [positive regulation of melanocyte differentiation]
GO:0046872 [metal ion binding]
GO:0048070 [regulation of developmental pigmentation]
GO:0062023 [collagen-containing extracellular matrix]
Show all
1910 aa
214.7 kDa
Yes 0
ADAMTS20-202
ENSP00000447427
ENST00000549670
H0YHN3
[Direct mapping] A disintegrin and metalloproteinase with thrombospondin motifs 20
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
634 aa
71.7 kDa
No 0
ADAMTS20-203
ENSP00000448341
ENST00000553158
G3V1X8
[Direct mapping] A disintegrin and metalloproteinase with thrombospondin motifs 20; ADAM metallopeptidase with thrombospondin type 1 motif, 20, isoform CRA_c
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Show all
GO:0004222 [metalloendopeptidase activity]
GO:0005576 [extracellular region]
GO:0006508 [proteolysis]
GO:0008233 [peptidase activity]
GO:0008237 [metallopeptidase activity]
GO:0016787 [hydrolase activity]
GO:0030198 [extracellular matrix organization]
GO:0046872 [metal ion binding]
Show all
1504 aa
169.5 kDa
Yes 0

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