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CCDC106
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  • CCDC106
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:68.3 nTPM
HPA Brain:59.4 nTPM
GTEx:68.3 nTPM
FANTOM5:113.6 Scaled Tags Per Million
Pig:118.7 nTPM
Mouse:94.9 nTPM
Allen mouse:2.7 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041925Antibody HPA043219
Glial cells LowLow
Neuronal cells LowHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

59.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 56.4
2290 Female, age 72, unknown 69.4
2289 Male, age 61, right hemisphere 62.5
1857 Female, age 85, left hemisphere 62.3
2846 Female, age 79, unknown 62.3
1854 Male, age 80, left hemisphere 54.8
1781 Male, age 74, unknown 51.3
2288 Male, age 75, left hemisphere 46.8
2481 Female, age 94, left hemisphere 41.9
Globus pallidus, externus
nTPM: 33.8
2646 Male, age 61, right hemisphere 43.2
2567 Female, age 72, unknown 36.8
2772 Female, age 79, unknown 31.6
1996 Male, age 80, right hemisphere 30.1
2395 Male, age 75, both hemispheres 27.4
Globus pallidus, internus
nTPM: 28.5
2483 Female, age 94, right hemisphere 37.3
2566 Female, age 72, unknown 32.0
1818 Male, age 74, unknown 29.8
2037 Male, age 80, right hemisphere 26.9
2287 Male, age 75, right hemisphere 26.5
2111 Female, age 85, right hemisphere 26.4
2778 Female, age 91, both hemispheres 20.7
Nucleus accumbens
nTPM: 52.5
1783 Male, age 74, unknown 67.2
2824 Male, age 61, right hemisphere 66.9
1806 Female, age 85, left hemisphere 61.9
1856 Female, age 91, right hemisphere 61.9
2698 Female, age 72, unknown 55.2
2286 Male, age 75, left hemisphere 43.8
2391 Female, age 94, left hemisphere 32.0
2732 Male, age 80, right hemisphere 31.4
Nucleus basalis of Meynert
nTPM: 44.3
2484 Female, age 94, left hemisphere 48.8
2569 Male, age 61, both hemispheres 47.6
2393 Male, age 80, right hemisphere 44.2
2821 Male, age 75, both hemispheres 36.7
Nucleus of the diagonal band
nTPM: 44.3
2195 Female, age 85, both hemispheres 47.3
2775 Male, age 80, right hemisphere 45.4
1979 Male, age 74, unknown 44.1
2029 Male, age 61, right hemisphere 42.4
1812 Female, age 91, both hemispheres 42.3
Putamen
nTPM: 59.4
1838 Male, age 80, right hemisphere 68.1
2647 Male, age 75, left hemisphere 64.8
2489 Female, age 72, unknown 63.3
1829 Male, age 74, unknown 60.3
2466 Female, age 79, unknown 59.2
1937 Female, age 91, right hemisphere 56.0
2482 Female, age 94, left hemisphere 43.8
Septal nuclei
nTPM: 40.1
1960 Male, age 74, unknown 52.9
2031 Female, age 72, unknown 41.1
2059 Female, age 85, both hemispheres 40.9
2394 Male, age 61, left hemisphere 37.6
2629 Female, age 94, right hemisphere 37.4
2199 Male, age 80, right hemisphere 36.5
2009 Female, age 91, both hemispheres 34.4
Stria terminalis, bed nucleus
nTPM: 39.8
1974 Female, age 91, both hemispheres 43.1
2486 Female, age 94, both hemispheres 38.9
2201 Male, age 74, unknown 37.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.9
Samples: 246

Max nTPM: 121.5
Min nTPM: 18.5
Std nTPM: 19.5
Median nTPM: 60.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 121.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 117.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 114.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 113.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 112.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 110.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 100.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 97.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 96.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 93.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 92.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 91.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 88.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 88.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 85.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 85.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 85.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 84.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 84.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 84.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 82.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 82.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 82.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 82.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 81.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 81.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 81.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 81.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 80.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 80.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 80.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 79.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 79.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 79.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 79.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 79.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 79.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 78.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 78.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 77.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 77.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 77.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 77.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 77.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 76.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 76.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 76.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 76.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 75.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 75.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 75.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 75.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 75.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 75.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 73.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 73.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 73.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 72.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 72.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 71.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 69.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 69.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 69.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 69.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 69.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 69.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 68.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 67.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 67.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 67.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 66.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 66.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 66.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 65.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 65.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 64.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 64.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 64.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 64.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 64.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 63.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 63.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 63.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 63.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 63.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 63.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 63.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 62.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 62.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 61.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 61.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 61.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 60.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 60.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 60.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 60.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 60.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 60.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 59.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 59.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 58.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 57.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 57.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 56.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 56.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 56.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 55.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 55.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 55.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 54.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 54.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 53.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 53.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 53.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 53.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 52.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 51.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 51.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 51.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 49.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 49.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 48.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 48.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 48.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 48.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 48.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 47.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 47.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 47.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 47.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 46.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 46.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 46.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 45.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 45.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 44.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 44.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 44.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 44.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 44.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 43.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 42.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 42.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 42.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 41.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 41.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 41.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 40.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 40.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 40.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 38.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 37.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 37.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 37.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 36.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 36.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 35.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 35.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 34.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 33.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 33.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 31.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 30.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 28.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 28.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 27.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 23.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 22.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 21.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 68.3
Samples: 246

Max nTPM: 135.8
Min nTPM: 16.3
Std nTPM: 19.9
Median nTPM: 68.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 135.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 119.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 111.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 110.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 108.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 107.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 105.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 104.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 104.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 103.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 103.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 102.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 101.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 101.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 100.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 99.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 98.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 98.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 97.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 97.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 96.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 94.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 94.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 93.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 93.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 93.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 93.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 93.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 92.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 92.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 92.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 91.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 90.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 90.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 90.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 89.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 89.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 89.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 88.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 88.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 88.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 87.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 87.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 87.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 87.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 86.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 85.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 84.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 84.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 83.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 83.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 83.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 83.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 83.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 82.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 82.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 82.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 81.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 81.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 81.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 81.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 81.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 80.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 80.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 80.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 80.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 79.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 79.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 78.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 78.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 77.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 77.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 76.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 76.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 76.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 76.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 75.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 75.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 75.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 75.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 75.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 75.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 75.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 74.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 74.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 74.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 74.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 74.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 73.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 73.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 73.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 72.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 72.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 72.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 72.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 71.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 71.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 71.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 71.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 71.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 71.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 70.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 70.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 70.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 70.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 70.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 70.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 70.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 70.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 70.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 69.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 69.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 69.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 68.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 68.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 68.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 68.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 68.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 68.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 68.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 68.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 68.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 68.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 68.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 67.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 66.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 66.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 65.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 65.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 65.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 65.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 64.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 64.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 64.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 64.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 64.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 63.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 63.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 63.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 63.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 63.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 62.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 62.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 62.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 62.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 62.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 62.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 61.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 60.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 60.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 60.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 60.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 59.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 59.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 59.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 58.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 58.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 58.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 57.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 56.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 56.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 56.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 56.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 55.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 54.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 54.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 54.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 54.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 54.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 54.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 53.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 52.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 51.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 51.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 51.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 51.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 51.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 51.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 50.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 50.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 50.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 50.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 49.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 49.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 48.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 48.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 48.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 47.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 47.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 47.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 47.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 45.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 45.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 45.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 44.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 44.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 44.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 43.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 43.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 42.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 41.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 41.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 41.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 40.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 40.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 39.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 36.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 36.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 36.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 32.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 30.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 29.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 23.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 20.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 18.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 16.3
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Brain - Putamen (basal ganglia)
Average nTPM: 65.2
Samples: 205

Max nTPM: 126.9
Min nTPM: 22.7
Std nTPM: 19.8
Median nTPM: 65.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 126.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 124.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 119.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 117.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 110.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 108.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 105.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 102.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 100.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 99.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 97.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 95.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 95.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 94.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 94.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 94.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 92.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 91.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 90.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 89.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 89.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 89.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 88.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 88.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 88.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 88.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 87.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 87.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 87.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 86.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 86.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 85.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 84.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 83.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 83.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 83.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 82.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 82.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 82.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 81.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 81.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 80.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 80.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 80.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 80.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 80.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 79.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 79.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 79.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 78.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 78.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 78.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 77.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 76.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 76.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 75.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 75.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 75.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 74.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 74.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 74.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 73.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 73.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 73.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 73.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 72.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 72.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 71.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 71.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 71.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 71.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 71.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 71.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 70.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 70.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 70.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 69.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 69.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 69.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 69.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 69.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 68.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 68.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 68.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 67.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 67.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 66.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 66.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 66.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 66.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 65.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 65.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 65.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 65.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 65.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 65.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 64.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 63.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 63.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 62.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 61.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 61.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 61.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 61.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 60.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 59.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 59.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 59.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 59.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 58.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 58.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 58.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 57.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 57.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 57.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 57.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 56.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 56.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 56.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 56.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 54.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 54.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 54.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 54.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 53.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 53.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 53.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 52.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 52.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 52.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 50.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 50.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 50.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 50.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 49.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 49.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 49.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 49.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 48.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 48.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 48.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 48.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 48.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 47.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 47.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 46.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 46.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 46.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 46.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 46.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 46.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 45.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 45.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 45.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 44.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 43.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 43.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 43.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 40.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 39.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 37.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 34.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 34.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 34.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 33.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 33.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 33.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 33.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 32.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 31.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 30.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 27.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 27.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 26.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 22.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

113.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 85.6
FF:10164-103B2 76 years, female 85.6
Nucleus accumbens
Scaled Tags Per Million: 106.0
FF:10037-101F1 23-56 years, mixed 106.0
Putamen
Scaled Tags Per Million: 113.6
FF:10176-103C5 60 years, female 113.6
Globus pallidus
Scaled Tags Per Million: 65.8
FF:10175-103C4 60 years, female 75.3
FF:10161-103A8 76 years, female 56.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

118.7
Pig sample Sample description nTPM
Caudate
nTPM: 111.3
Samples: 4

Max nTPM: 144.3
Min nTPM: 86.1
Sample A Female 86.1
Sample B Female 114.9
Sample C Male 144.3
Sample D Male 99.9
Putamen
nTPM: 118.7
Samples: 4

Max nTPM: 159.7
Min nTPM: 74.5
Sample A Female 74.5
Sample B Female 104.8
Sample C Male 159.7
Sample D Male 135.8
Septum
nTPM: 85.3
Samples: 4

Max nTPM: 97.4
Min nTPM: 68.6
Sample A Female 97.4
Sample B Female 93.4
Sample C Male 68.6
Sample D Male 81.9
Ventral pallidum
nTPM: 94.6
Samples: 4

Max nTPM: 100.9
Min nTPM: 88.4
Sample A Female 96.6
Sample B Female 100.9
Sample C Male 92.4
Sample D Male 88.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 95.0
Samples: 4

Max nTPM: 107.5
Min nTPM: 77.0
Sample A Male 100.0
Sample B Male 107.5
Sample C Female 77.0
Sample D Female 95.3
Septum
nTPM: 70.3
Samples: 4

Max nTPM: 79.0
Min nTPM: 64.2
Sample A Male 79.0
Sample B Male 72.5
Sample C Female 65.4
Sample D Female 64.2
Ventral forebrain
nTPM: 87.7
Samples: 4

Max nTPM: 95.8
Min nTPM: 82.2
Sample A Male 88.5
Sample B Male 82.2
Sample C Female 95.8
Sample D Female 84.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.7
583852 Antisense, RP_040831_01_B03, Mouse strain C57BL/6J (56 days, male) 2.7
Pallidum
Expression energy: 2.4
583852 Antisense, RP_040831_01_B03, Mouse strain C57BL/6J (56 days, male) 2.4

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