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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:28.4 nTPM
HPA Brain:38.6 nTPM
GTEx:28.4 nTPM
FANTOM5:57.7 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:13.3 nTPM
Allen mouse:1.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA020068
Glial cells Not detected
Neuronal cells Low


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.5
2288 Male, age 75, left hemisphere 34.8
2290 Female, age 72, unknown 32.1
1857 Female, age 85, left hemisphere 30.2
2846 Female, age 79, unknown 29.1
2481 Female, age 94, left hemisphere 23.7
1854 Male, age 80, left hemisphere 22.6
1781 Male, age 74, unknown 20.2
2289 Male, age 61, right hemisphere 19.0
Globus pallidus, externus
nTPM: 36.6
2646 Male, age 61, right hemisphere 47.5
1996 Male, age 80, right hemisphere 36.6
2567 Female, age 72, unknown 36.2
2395 Male, age 75, both hemispheres 31.5
2772 Female, age 79, unknown 31.2
Globus pallidus, internus
nTPM: 36.1
2483 Female, age 94, right hemisphere 46.2
2287 Male, age 75, right hemisphere 43.7
1818 Male, age 74, unknown 36.1
2111 Female, age 85, right hemisphere 33.4
2037 Male, age 80, right hemisphere 31.6
2778 Female, age 91, both hemispheres 31.6
2566 Female, age 72, unknown 29.9
Nucleus accumbens
nTPM: 26.1
2286 Male, age 75, left hemisphere 31.0
2698 Female, age 72, unknown 27.4
1806 Female, age 85, left hemisphere 26.8
1783 Male, age 74, unknown 26.4
2732 Male, age 80, right hemisphere 26.4
1856 Female, age 91, right hemisphere 25.3
2391 Female, age 94, left hemisphere 25.2
2824 Male, age 61, right hemisphere 20.3
Nucleus basalis of Meynert
nTPM: 38.6
2569 Male, age 61, both hemispheres 54.1
2484 Female, age 94, left hemisphere 38.0
2821 Male, age 75, both hemispheres 35.7
2393 Male, age 80, right hemisphere 26.7
Nucleus of the diagonal band
nTPM: 18.0
1812 Female, age 91, both hemispheres 21.7
2195 Female, age 85, both hemispheres 18.7
1979 Male, age 74, unknown 17.4
2775 Male, age 80, right hemisphere 16.2
2029 Male, age 61, right hemisphere 15.9
Putamen
nTPM: 29.1
2647 Male, age 75, left hemisphere 36.4
2489 Female, age 72, unknown 34.3
1829 Male, age 74, unknown 30.4
2466 Female, age 79, unknown 28.3
1937 Female, age 91, right hemisphere 25.8
2482 Female, age 94, left hemisphere 24.7
1838 Male, age 80, right hemisphere 23.6
Septal nuclei
nTPM: 19.7
2394 Male, age 61, left hemisphere 26.8
2199 Male, age 80, right hemisphere 26.3
2031 Female, age 72, unknown 18.4
2059 Female, age 85, both hemispheres 17.7
2009 Female, age 91, both hemispheres 17.0
1960 Male, age 74, unknown 16.5
2629 Female, age 94, right hemisphere 15.5
Stria terminalis, bed nucleus
nTPM: 16.5
2201 Male, age 74, unknown 18.9
1974 Female, age 91, both hemispheres 18.8
2486 Female, age 94, both hemispheres 11.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 22.3
Samples: 246

Max nTPM: 93.5
Min nTPM: 6.3
Std nTPM: 13.6
Median nTPM: 19.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 93.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 73.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 67.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 63.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 62.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 60.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 60.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 59.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 59.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 52.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 51.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 49.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 43.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 42.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 38.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 36.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 36.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 36.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 35.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 34.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 34.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 33.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 33.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 33.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 33.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 33.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 33.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 33.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 32.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 32.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 31.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 31.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 30.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 29.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 29.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 29.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 29.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 28.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 28.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 28.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 28.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 27.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 27.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 27.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 27.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 26.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 26.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 25.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 25.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 25.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 25.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 25.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 25.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 25.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 24.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 24.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 24.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 24.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 23.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 23.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 23.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 22.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 22.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 22.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 22.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 22.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 22.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 22.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 22.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 22.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 21.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 21.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 21.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 21.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 21.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 21.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 21.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 21.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 21.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 20.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 20.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 20.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 20.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 20.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 20.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 20.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 20.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 19.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 19.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 19.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 19.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 19.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 19.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 19.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 19.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 19.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 19.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 19.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 19.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 18.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 18.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 18.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 18.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 18.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 18.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 18.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 18.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 17.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 17.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 17.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 17.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 17.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 17.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 17.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 16.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 16.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 16.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 16.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 16.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 16.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 16.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 16.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 16.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 16.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 16.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 15.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 15.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 15.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 15.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 15.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 15.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 14.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 14.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 14.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 14.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 14.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 14.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 14.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 14.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 14.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 14.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 13.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 13.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 13.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 13.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 13.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 13.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 13.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 13.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 13.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 13.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 13.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 13.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 13.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 13.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 12.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 12.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 12.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 12.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 12.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 12.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 12.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 11.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 11.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 11.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 11.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 11.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 11.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 11.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 11.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 11.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 11.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 10.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 10.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 10.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 10.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 10.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 10.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 9.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 9.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 9.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 9.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 9.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 9.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 9.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 9.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 9.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 9.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 9.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 9.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 9.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 9.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 8.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 8.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 8.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 8.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 8.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 8.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 8.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 8.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 7.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 7.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 7.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 7.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 7.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 7.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 6.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 6.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 6.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 6.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 17.6
Samples: 246

Max nTPM: 73.6
Min nTPM: 4.8
Std nTPM: 11.2
Median nTPM: 14.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 73.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 71.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 58.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 57.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 53.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 50.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 48.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 46.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 46.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 43.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 42.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 41.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 41.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 40.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 37.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 37.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 37.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 36.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 36.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 34.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 32.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 32.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 31.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 31.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 30.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 30.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 29.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 29.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 28.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 28.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 28.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 27.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 26.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 26.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 26.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 26.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 26.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 25.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 25.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 25.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 25.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 25.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 24.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 24.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 23.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 23.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 23.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 23.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 23.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 23.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 22.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 22.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 21.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 21.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 20.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 20.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 20.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 20.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 20.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 20.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 19.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 19.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 19.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 19.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 19.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 19.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 18.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 18.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 18.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 18.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 18.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 17.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 17.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 17.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 17.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 17.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 17.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 17.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 17.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 16.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 16.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 16.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 16.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 16.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 16.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 16.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 16.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 16.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 16.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 16.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 16.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 16.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 15.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 15.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 15.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 15.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 15.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 15.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 15.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 15.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 15.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 15.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 14.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 14.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 14.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 14.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 14.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 14.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 14.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 14.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 14.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 14.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 14.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 14.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 14.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 14.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 14.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 14.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 13.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 13.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 13.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 13.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 13.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 13.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 13.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 13.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 13.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 13.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 13.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 13.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 13.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 13.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 13.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 12.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 12.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 12.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 12.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 12.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 12.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 12.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 12.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 12.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 12.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 12.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 12.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 12.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 12.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 12.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 12.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 12.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 12.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 11.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 11.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 11.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 11.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 11.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 11.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 11.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 11.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 11.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 11.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 11.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 11.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 10.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 10.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 10.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 10.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 10.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 10.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 10.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 10.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 10.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 10.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 10.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 10.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 10.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 10.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 10.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 10.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 10.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 9.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 9.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 9.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 9.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 9.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 9.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 9.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 9.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 9.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 9.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 9.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 9.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 9.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 9.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 9.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 9.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 9.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 8.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 8.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 8.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 8.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 8.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 8.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 8.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 8.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 8.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 8.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 8.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 7.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 7.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 7.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 7.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 7.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 7.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 7.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 7.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 7.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 7.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 7.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 7.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 6.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 6.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 6.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 6.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 5.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 5.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 5.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 4.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 4.8
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Brain - Putamen (basal ganglia)
Average nTPM: 28.4
Samples: 205

Max nTPM: 104.0
Min nTPM: 7.5
Std nTPM: 17.2
Median nTPM: 24.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 104.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 85.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 83.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 83.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 79.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 78.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 76.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 74.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 73.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 72.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 72.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 63.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 61.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 59.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 58.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 56.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 54.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 49.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 48.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 48.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 47.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 47.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 46.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 45.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 43.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 43.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 42.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 42.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 41.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 41.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 41.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 41.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 41.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 40.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 39.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 39.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 39.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 39.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 37.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 37.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 35.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 34.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 34.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 34.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 33.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 32.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 31.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 31.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 31.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 31.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 31.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 30.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 30.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 30.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 30.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 30.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 30.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 29.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 29.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 29.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 28.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 28.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 28.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 28.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 28.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 27.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 27.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 27.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 27.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 26.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 26.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 26.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 26.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 26.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 25.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 25.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 25.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 25.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 25.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 25.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 25.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 25.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 24.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 24.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 24.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 24.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 24.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 24.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 24.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 24.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 24.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 23.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 23.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 23.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 23.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 23.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 23.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 23.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 23.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 22.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 22.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 22.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 22.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 22.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 21.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 21.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 21.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 20.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 20.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 20.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 19.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 19.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 19.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 19.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 19.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 19.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 19.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 18.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 18.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 18.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 18.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 17.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 17.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 17.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 16.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 16.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 16.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 16.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 16.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 16.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 16.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 15.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 15.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 15.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 15.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 15.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 15.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 15.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 15.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 15.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 15.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 15.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 14.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 14.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 13.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 13.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 13.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 13.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 13.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 13.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 12.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 12.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 12.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 12.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 12.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 11.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 11.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 11.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 11.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 11.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 11.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 11.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 10.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 10.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 10.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 10.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 10.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 10.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 9.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 9.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 9.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 9.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 8.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 8.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 8.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 7.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

57.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 19.9
FF:10164-103B2 76 years, female 19.9
Nucleus accumbens
Scaled Tags Per Million: 54.1
FF:10037-101F1 23-56 years, mixed 54.1
Putamen
Scaled Tags Per Million: 27.6
FF:10176-103C5 60 years, female 27.6
Globus pallidus
Scaled Tags Per Million: 57.7
FF:10175-103C4 60 years, female 64.3
FF:10161-103A8 76 years, female 51.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

18.4
Pig sample Sample description nTPM
Caudate
nTPM: 14.6
Samples: 4

Max nTPM: 17.3
Min nTPM: 13.2
Sample A Female 14.3
Sample B Female 13.2
Sample C Male 17.3
Sample D Male 13.7
Putamen
nTPM: 18.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 14.5
Sample A Female 18.7
Sample B Female 14.5
Sample C Male 23.7
Sample D Male 16.5
Septum
nTPM: 18.4
Samples: 4

Max nTPM: 26.5
Min nTPM: 11.7
Sample A Female 20.2
Sample B Female 15.2
Sample C Male 26.5
Sample D Male 11.7
Ventral pallidum
nTPM: 17.4
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.0
Sample A Female 13.0
Sample B Female 18.1
Sample C Male 23.4
Sample D Male 15.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 10.5
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.8
Sample A Male 8.8
Sample B Male 10.1
Sample C Female 12.6
Sample D Female 10.4
Septum
nTPM: 10.3
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 9.2
Sample C Female 11.9
Sample D Female 10.8
Ventral forebrain
nTPM: 13.3
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.2
Sample A Male 11.2
Sample B Male 12.4
Sample C Female 16.3
Sample D Female 13.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.4
70539162 Antisense, RP_050324_01_F06, Mouse strain C57BL/6J (56 days, male) 2.4
74581396 Antisense, RP_060117_02_C05, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 1.2
70539162 Antisense, RP_050324_01_F06, Mouse strain C57BL/6J (56 days, male) 2.2
74581396 Antisense, RP_060117_02_C05, Mouse strain C57BL/6J (56 days, male) 0.3

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