We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
HRAS
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • HRAS
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:117.0 nTPM
HPA Brain:32.1 nTPM
GTEx:117.0 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:50.0 nTPM
Mouse:301.4 nTPM
Allen mouse:7.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049830Antibody CAB002015Antibody CAB080330Antibody CAB080331Antibody CAB080332
Glial cells Not detectedHighNot detectedLowNot detected
Neuronal cells Not detectedHighNot detectedLowLow










BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.7
2290 Female, age 72, unknown 34.6
2289 Male, age 61, right hemisphere 33.9
1857 Female, age 85, left hemisphere 33.6
2288 Male, age 75, left hemisphere 27.0
1854 Male, age 80, left hemisphere 25.3
2846 Female, age 79, unknown 24.0
2481 Female, age 94, left hemisphere 21.2
1781 Male, age 74, unknown 14.0
Globus pallidus, externus
nTPM: 26.9
2646 Male, age 61, right hemisphere 30.3
2772 Female, age 79, unknown 29.6
2567 Female, age 72, unknown 26.6
2395 Male, age 75, both hemispheres 24.5
1996 Male, age 80, right hemisphere 23.3
Globus pallidus, internus
nTPM: 23.0
2778 Female, age 91, both hemispheres 31.1
2566 Female, age 72, unknown 30.4
2037 Male, age 80, right hemisphere 27.8
2483 Female, age 94, right hemisphere 24.8
2287 Male, age 75, right hemisphere 17.6
1818 Male, age 74, unknown 16.4
2111 Female, age 85, right hemisphere 12.7
Nucleus accumbens
nTPM: 23.9
1856 Female, age 91, right hemisphere 32.5
2698 Female, age 72, unknown 27.7
2732 Male, age 80, right hemisphere 26.4
1783 Male, age 74, unknown 23.2
2286 Male, age 75, left hemisphere 21.7
2824 Male, age 61, right hemisphere 20.2
2391 Female, age 94, left hemisphere 20.1
1806 Female, age 85, left hemisphere 19.9
Nucleus basalis of Meynert
nTPM: 30.1
2569 Male, age 61, both hemispheres 40.9
2393 Male, age 80, right hemisphere 27.6
2484 Female, age 94, left hemisphere 26.9
2821 Male, age 75, both hemispheres 25.3
Nucleus of the diagonal band
nTPM: 23.9
1979 Male, age 74, unknown 30.0
2775 Male, age 80, right hemisphere 27.2
2029 Male, age 61, right hemisphere 22.9
2195 Female, age 85, both hemispheres 21.6
1812 Female, age 91, both hemispheres 17.7
Putamen
nTPM: 32.1
2489 Female, age 72, unknown 39.8
2647 Male, age 75, left hemisphere 38.5
2466 Female, age 79, unknown 34.1
1838 Male, age 80, right hemisphere 32.0
1937 Female, age 91, right hemisphere 30.5
1829 Male, age 74, unknown 25.7
2482 Female, age 94, left hemisphere 24.2
Septal nuclei
nTPM: 28.5
1960 Male, age 74, unknown 44.9
2031 Female, age 72, unknown 33.5
2059 Female, age 85, both hemispheres 29.1
2009 Female, age 91, both hemispheres 27.3
2394 Male, age 61, left hemisphere 25.4
2629 Female, age 94, right hemisphere 20.1
2199 Male, age 80, right hemisphere 19.1
Stria terminalis, bed nucleus
nTPM: 22.5
1974 Female, age 91, both hemispheres 24.4
2486 Female, age 94, both hemispheres 22.2
2201 Male, age 74, unknown 20.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 107.4
Samples: 246

Max nTPM: 249.7
Min nTPM: 36.8
Std nTPM: 33.8
Median nTPM: 103.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 249.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 206.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 200.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 196.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 191.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 188.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 184.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 183.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 183.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 182.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 180.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 177.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 176.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 173.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 171.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 167.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 160.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 157.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 157.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 156.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 154.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 150.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 149.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 149.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 148.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 148.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 148.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 146.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 145.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 145.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 141.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 139.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 139.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 139.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 138.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 137.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 137.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 136.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 136.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 136.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 135.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 134.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 133.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 132.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 132.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 131.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 131.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 131.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 130.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 130.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 130.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 130.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 129.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 129.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 128.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 128.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 128.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 127.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 127.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 127.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 126.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 126.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 125.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 124.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 124.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 124.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 122.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 120.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 120.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 119.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 118.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 118.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 117.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 117.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 115.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 115.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 115.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 115.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 115.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 115.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 115.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 115.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 114.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 114.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 114.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 114.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 114.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 113.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 112.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 112.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 112.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 111.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 111.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 111.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 111.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 110.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 110.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 110.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 110.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 109.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 109.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 108.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 108.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 108.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 108.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 107.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 107.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 106.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 105.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 105.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 105.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 105.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 104.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 104.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 104.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 103.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 103.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 103.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 103.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 102.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 102.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 102.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 102.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 102.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 102.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 102.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 102.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 101.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 101.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 100.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 98.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 98.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 98.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 98.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 98.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 97.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 97.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 97.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 96.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 96.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 96.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 96.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 95.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 95.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 94.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 94.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 94.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 93.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 93.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 93.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 93.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 92.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 92.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 91.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 91.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 91.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 91.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 90.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 90.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 89.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 88.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 88.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 88.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 87.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 87.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 86.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 86.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 85.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 85.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 85.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 85.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 85.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 80.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 80.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 79.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 79.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 77.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 77.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 76.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 76.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 76.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 75.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 75.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 75.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 73.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 72.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 71.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 71.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 71.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 71.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 71.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 70.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 70.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 69.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 68.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 68.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 68.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 67.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 66.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 65.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 64.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 64.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 64.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 63.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 59.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 55.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 53.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 49.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 49.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.8
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 106.4
Samples: 246

Max nTPM: 214.5
Min nTPM: 38.9
Std nTPM: 30.0
Median nTPM: 103.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 214.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 204.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 201.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 198.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 184.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 174.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 174.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 173.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 168.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 167.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 167.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 165.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 162.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 161.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 159.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 155.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 154.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 154.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 150.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 149.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 147.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 143.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 143.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 143.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 142.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 141.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 141.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 141.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 141.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 141.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 141.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 139.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 138.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 138.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 136.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 135.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 135.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 135.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 134.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 134.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 134.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 132.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 132.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 131.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 131.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 130.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 130.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 129.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 129.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 128.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 128.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 127.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 127.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 127.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 126.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 126.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 126.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 126.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 126.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 126.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 125.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 125.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 124.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 124.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 123.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 123.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 123.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 122.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 121.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 121.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 119.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 119.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 119.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 119.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 118.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 118.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 117.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 116.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 116.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 116.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 116.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 116.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 115.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 115.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 114.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 114.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 114.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 114.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 113.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 113.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 113.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 113.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 112.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 111.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 111.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 110.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 110.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 110.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 109.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 109.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 108.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 108.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 108.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 108.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 107.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 107.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 106.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 106.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 106.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 106.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 106.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 105.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 105.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 105.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 105.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 105.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 104.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 104.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 103.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 103.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 103.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 103.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 102.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 102.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 101.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 101.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 100.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 100.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 100.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 99.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 99.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 99.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 99.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 98.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 98.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 98.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 97.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 97.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 97.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 97.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 96.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 95.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 95.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 95.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 95.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 95.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 94.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 94.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 94.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 94.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 93.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 93.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 92.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 92.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 92.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 92.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 91.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 91.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 91.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 91.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 90.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 90.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 89.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 88.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 88.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 88.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 88.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 88.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 87.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 87.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 87.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 86.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 86.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 86.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 86.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 86.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 86.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 85.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 85.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 85.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 85.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 85.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 84.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 84.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 84.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 84.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 84.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 83.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 83.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 83.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 83.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 82.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 82.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 81.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 81.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 81.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 81.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 81.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 80.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 80.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 80.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 79.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 79.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 79.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 78.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 78.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 78.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 76.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 75.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 75.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 75.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 74.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 73.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 73.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 73.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 73.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 72.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 72.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 72.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 71.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 70.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 70.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 69.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 69.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 68.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 65.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 62.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 62.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 60.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 59.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 50.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 43.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 42.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 117.0
Samples: 205

Max nTPM: 214.2
Min nTPM: 57.7
Std nTPM: 31.7
Median nTPM: 112.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 214.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 204.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 195.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 192.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 190.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 187.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 185.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 184.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 183.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 180.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 177.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 176.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 174.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 174.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 173.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 171.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 166.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 165.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 162.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 159.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 157.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 156.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 156.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 155.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 154.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 153.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 151.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 151.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 151.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 151.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 151.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 150.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 150.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 150.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 149.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 148.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 147.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 146.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 144.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 143.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 142.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 142.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 141.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 141.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 140.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 140.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 140.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 139.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 139.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 136.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 135.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 135.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 135.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 134.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 134.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 134.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 134.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 134.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 133.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 133.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 133.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 133.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 133.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 132.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 131.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 130.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 130.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 129.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 128.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 128.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 128.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 128.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 128.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 127.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 126.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 126.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 125.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 125.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 125.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 123.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 122.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 121.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 121.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 120.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 119.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 119.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 118.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 118.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 118.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 117.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 117.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 117.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 116.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 116.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 116.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 116.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 115.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 114.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 114.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 114.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 113.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 112.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 112.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 112.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 112.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 112.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 111.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 111.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 110.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 109.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 109.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 108.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 108.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 108.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 108.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 107.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 107.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 106.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 106.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 105.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 105.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 105.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 104.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 104.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 103.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 103.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 103.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 103.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 102.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 102.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 102.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 102.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 101.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 101.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 101.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 99.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 99.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 98.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 98.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 97.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 97.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 96.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 96.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 96.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 95.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 95.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 94.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 93.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 92.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 92.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 91.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 91.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 90.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 90.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 90.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 90.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 90.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 89.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 89.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 89.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 89.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 89.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 88.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 88.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 88.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 87.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 86.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 85.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 85.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 84.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 83.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 83.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 83.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 83.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 82.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 82.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 82.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 81.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 81.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 81.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 80.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 78.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 76.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 76.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 76.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 76.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 75.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 72.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 72.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 71.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 69.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 68.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 64.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 62.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 60.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 59.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 58.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 57.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 42.8
FF:10164-103B2 76 years, female 42.8
Nucleus accumbens
Scaled Tags Per Million: 44.0
FF:10037-101F1 23-56 years, mixed 44.0
Putamen
Scaled Tags Per Million: 45.9
FF:10176-103C5 60 years, female 45.9
Globus pallidus
Scaled Tags Per Million: 32.5
FF:10175-103C4 60 years, female 38.4
FF:10161-103A8 76 years, female 26.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.0
Pig sample Sample description nTPM
Caudate
nTPM: 39.1
Samples: 4

Max nTPM: 47.5
Min nTPM: 32.6
Sample A Female 32.6
Sample B Female 40.7
Sample C Male 47.5
Sample D Male 35.7
Putamen
nTPM: 50.0
Samples: 4

Max nTPM: 60.9
Min nTPM: 41.4
Sample A Female 46.8
Sample B Female 41.4
Sample C Male 60.9
Sample D Male 51.0
Septum
nTPM: 34.4
Samples: 4

Max nTPM: 36.7
Min nTPM: 31.9
Sample A Female 33.6
Sample B Female 31.9
Sample C Male 35.5
Sample D Male 36.7
Ventral pallidum
nTPM: 37.2
Samples: 4

Max nTPM: 43.9
Min nTPM: 29.6
Sample A Female 29.6
Sample B Female 35.9
Sample C Male 43.9
Sample D Male 39.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

301.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 301.5
Samples: 4

Max nTPM: 339.1
Min nTPM: 257.4
Sample A Male 298.5
Sample B Male 339.1
Sample C Female 257.4
Sample D Female 310.8
Septum
nTPM: 135.1
Samples: 4

Max nTPM: 139.2
Min nTPM: 124.7
Sample A Male 139.2
Sample B Male 138.4
Sample C Female 138.0
Sample D Female 124.7
Ventral forebrain
nTPM: 207.0
Samples: 4

Max nTPM: 256.2
Min nTPM: 186.6
Sample A Male 194.5
Sample B Male 190.5
Sample C Female 256.2
Sample D Female 186.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.5
67979018 Antisense, RP_040923_01_H09, Mouse strain C57BL/6J (56 days, male) 7.5
Pallidum
Expression energy: 5.6
67979018 Antisense, RP_040923_01_H09, Mouse strain C57BL/6J (56 days, male) 5.6

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org