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WDR49
HPA
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  • WDR49
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

WDR49
Synonyms FLJ33620
Gene descriptioni

Full gene name according to HGNC.

WD repeat domain 49
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q26.1
Chromosome location (bp) 167478684 - 167653983
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000174776 (version 109)
Entrez gene 151790
HGNC HGNC:26587
UniProt Q8IV35 (UniProt - Evidence at transcript level)
neXtProt NX_Q8IV35
GeneCards WDR49
Antibodypedia WDR49 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Associates with components of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility, and might act as an inner dynein arm (IDA) hub or linkage.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the WD repeat protein family with nine WD repeats. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
WDR49-201
ENSP00000311343
ENST00000308378
Q8IV35
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
Show all
697 aa
79.3 kDa
No 0
WDR49-203
ENSP00000418718
ENST00000466760
C9IZ29
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
Show all
118 aa
12.8 kDa
No 0
WDR49-205
ENSP00000419130
ENST00000472600
H0Y8A5
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
Show all
748 aa
84.9 kDa
No 0
WDR49-207
ENSP00000419749
ENST00000479765
E9PDB0
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
Show all
518 aa
58.8 kDa
No 0
WDR49-208
ENSP00000419917
ENST00000488012
C9JY37
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
113 aa
12.5 kDa
No 0
WDR49-209
ENSP00000418539
ENST00000493061
H7C4Y4
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
Show all
139 aa
15.7 kDa
No 0
WDR49-210
ENSP00000497120
ENST00000647816
A0A3B3IS43
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
Show all
1038 aa
117.7 kDa
No 0
WDR49-211
ENSP00000507497
ENST00000682715
A0A804HJG6
[Direct mapping] WD repeat-containing protein 49
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005509 [calcium ion binding]
GO:0005515 [protein binding]
Show all
1049 aa
119 kDa
No 0

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