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SRP72
HPA
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  • SRP72
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SRP72
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Signal recognition particle 72
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband q12
Chromosome location (bp) 56467617 - 56503681
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000174780 (version 109)
Entrez gene 6731
HGNC HGNC:11303
UniProt O76094 (UniProt - Evidence at protein level)
neXtProt NX_O76094
GeneCards SRP72
Antibodypedia SRP72 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the signal recognition particle (SRP) complex, a ribonucleoprotein complex that mediates the cotranslational targeting of secretory and membrane proteins to the endoplasmic reticulum (ER) 1. The SRP complex interacts with the signal sequence in nascent secretory and membrane proteins and directs them to the membrane of the ER 2. The SRP complex targets the ribosome-nascent chain complex to the SRP receptor (SR), which is anchored in the ER, where SR compaction and GTPase rearrangement drive cotranslational protein translocation into the ER 3. Binds the signal recognition particle RNA (7SL RNA) in presence of SRP68 4, 5. Can bind 7SL RNA with low affinity 6, 7. The SRP complex possibly participates in the elongation arrest function (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ribonucleoprotein
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes the 72 kDa subunit of the signal recognition particle (SRP), a ribonucleoprotein complex that mediates the targeting of secretory proteins to the endoplasmic reticulum (ER). The SRP complex consists of a 7S RNA and 6 protein subunits: SRP9, SRP14, SRP19, SRP54, SRP68, and SRP72, that are bound to the 7S RNA as monomers or heterodimers. SRP has at least 3 distinct functions that can be associated with the protein subunits: signal recognition, translational arrest, and ER membrane targeting by interaction with the docking protein. Mutations in this gene are associated with familial bone marrow failure. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SRP72-201
ENSP00000473576
ENST00000504757
R4GNC1
[Direct mapping] Signal recognition particle subunit SRP72
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0006614 [SRP-dependent cotranslational protein targeting to membrane]
GO:1990904 [ribonucleoprotein complex]
Show all
220 aa
24.8 kDa
No 0
SRP72-202
ENSP00000425190
ENST00000505314
D6RDY6
[Direct mapping] Signal recognition particle subunit SRP72
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0006614 [SRP-dependent cotranslational protein targeting to membrane]
GO:1990904 [ribonucleoprotein complex]
Show all
335 aa
37.6 kDa
No 0
SRP72-204
ENSP00000424576
ENST00000510663
O76094
[Direct mapping] Signal recognition particle subunit SRP72
Show all
Transporters
   Primary Active Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005047 [signal recognition particle binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005786 [signal recognition particle, endoplasmic reticulum targeting]
GO:0005829 [cytosol]
GO:0006614 [SRP-dependent cotranslational protein targeting to membrane]
GO:0008312 [7S RNA binding]
GO:0030911 [TPR domain binding]
GO:0043022 [ribosome binding]
GO:0048500 [signal recognition particle]
GO:1990904 [ribonucleoprotein complex]
Show all
610 aa
67.9 kDa
No 0
SRP72-205
ENSP00000495128
ENST00000642900
O76094
[Direct mapping] Signal recognition particle subunit SRP72
Show all
V9HWK0
[Target identity:100%; Query identity:100%] Signal recognition particle subunit SRP72
Show all
Transporters
   Primary Active Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Cardiovascular diseases
   Hematologic diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005047 [signal recognition particle binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005786 [signal recognition particle, endoplasmic reticulum targeting]
GO:0005829 [cytosol]
GO:0006614 [SRP-dependent cotranslational protein targeting to membrane]
GO:0008312 [7S RNA binding]
GO:0030911 [TPR domain binding]
GO:0043022 [ribosome binding]
GO:0048500 [signal recognition particle]
GO:1990904 [ribonucleoprotein complex]
Show all
671 aa
74.6 kDa
No 0

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