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RSRC1
HPA
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  • SUMMARY

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  • RSRC1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RSRC1
Synonyms BM-011, MGC12197, SFRS21, SRrp53
Gene descriptioni

Full gene name according to HGNC.

Arginine and serine rich coiled-coil 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 3
Cytoband q25.32
Chromosome location (bp) 158105855 - 158545730
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

14
Ensembl ENSG00000174891 (version 109)
Entrez gene 51319
HGNC HGNC:24152
UniProt Q96IZ7 (UniProt - Evidence at protein level)
neXtProt NX_Q96IZ7
GeneCards RSRC1
Antibodypedia RSRC1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Has a role in alternative splicing and transcription regulation 1. Involved in both constitutive and alternative pre-mRNA splicing. May have a role in the recognition of the 3' splice site during the second step of splicing.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

mRNA processing, mRNA splicing
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the serine and arginine rich-related protein family. The encoded protein is involved in both constitutive and alternative mRNA splicing. This gene may be associated with schizophrenia. A pseudogene of this gene is located on chromosome 9. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Nov 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RSRC1-201
ENSP00000295930
ENST00000295930
Q96IZ7
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006397 [mRNA processing]
GO:0006913 [nucleocytoplasmic transport]
GO:0008380 [RNA splicing]
GO:0016607 [nuclear speck]
Show all
334 aa
38.7 kDa
No 0
RSRC1-202
ENSP00000308671
ENST00000312179
Q96IZ7
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006397 [mRNA processing]
GO:0006913 [nucleocytoplasmic transport]
GO:0008380 [RNA splicing]
GO:0016607 [nuclear speck]
Show all
276 aa
31.5 kDa
No 0
RSRC1-203
ENSP00000419794
ENST00000464171
Q96IZ7
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006397 [mRNA processing]
GO:0006913 [nucleocytoplasmic transport]
GO:0008380 [RNA splicing]
GO:0016607 [nuclear speck]
Show all
276 aa
31.5 kDa
No 0
RSRC1-206
ENSP00000417302
ENST00000471994
C9J367
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
203 aa
23.9 kDa
No 0
RSRC1-207
ENSP00000417816
ENST00000475278
C9J713
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
283 aa
33.4 kDa
No 0
RSRC1-208
ENSP00000419394
ENST00000476899
C9JVB3
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
336 aa
38.9 kDa
No 0
RSRC1-211
ENSP00000420150
ENST00000480820
Q96IZ7
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006397 [mRNA processing]
GO:0006913 [nucleocytoplasmic transport]
GO:0008380 [RNA splicing]
GO:0016607 [nuclear speck]
Show all
334 aa
38.7 kDa
No 0
RSRC1-212
ENSP00000420464
ENST00000482822
H7C5Q0
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
314 aa
36.2 kDa
No 0
RSRC1-213
ENSP00000417690
ENST00000494002
C9J8Q2
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
164 aa
19.9 kDa
No 0
RSRC1-215
ENSP00000481697
ENST00000611884
Q96IZ7
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006397 [mRNA processing]
GO:0006468 [protein phosphorylation]
GO:0006913 [nucleocytoplasmic transport]
GO:0008380 [RNA splicing]
GO:0016607 [nuclear speck]
GO:0046677 [response to antibiotic]
Show all
334 aa
38.7 kDa
No 0
RSRC1-216
ENSP00000508394
ENST00000682164
A0A804HLK3
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
311 aa
36 kDa
No 0
RSRC1-219
ENSP00000507909
ENST00000683137
H7C5Q0
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
314 aa
36.2 kDa
No 0
RSRC1-224
ENSP00000507514
ENST00000683899
A0A804HJI2
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
342 aa
39.6 kDa
No 0
RSRC1-228
ENSP00000507438
ENST00000684604
A0A804HJC0
[Direct mapping] Serine/Arginine-related protein 53
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Other diseases
   Mental and behavioural disorders
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000380 [alternative mRNA splicing, via spliceosome]
GO:0000398 [mRNA splicing, via spliceosome]
Show all
292 aa
33.6 kDa
No 0

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