HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:133.1 nTPM
HPA Brain:65.3 nTPM
GTEx:133.1 nTPM
FANTOM5:126.4 Scaled Tags Per Million
Pig:82.3 nTPM
Mouse:35.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045175
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 65.3
Sample id Sample description nTPM
Hippocampus
nTPM: 58.3
1898 Male, age 80, left hemisphere 72.7
2621 Female, age 67, right hemisphere 65.9
1855 Male, age 76, left hemisphere 63.6
2529 Female, age 94, left hemisphere 54.7
1911 Female, age 85, right hemisphere 51.2
2148 Female, age 91, left hemisphere 41.7
Dentate gyrus
nTPM: 61.8
2530 Female, age 94, left hemisphere 107.1
2010 Male, age 76, both hemispheres 66.7
2531 Female, age 67, both hemispheres 62.4
1927 Female, age 91, both hemispheres 49.1
2246 Female, age 85, both hemispheres 43.7
2528 Male, age 74, both hemispheres 41.8
Entorhinal gyrus
nTPM: 55.2
2686 Male, age 75, right hemisphere 67.8
2613 Female, age 94, left hemisphere 66.4
2764 Male, age 80, right hemisphere 59.7
1787 Male, age 76, left hemisphere 47.1
2117 Female, age 91, right hemisphere 45.6
1938 Female, age 85, left hemisphere 44.7
Hippocampus, CA1
nTPM: 62.6
2749 Male, age 80, left hemisphere 105.9
1873 Female, age 85, both hemispheres 59.9
2045 Male, age 76, both hemispheres 57.9
2527 Male, age 74, both hemispheres 47.8
2082 Female, age 91, right hemisphere 41.6
Hippocampus, CA2
nTPM: 65.3
1963 Male, age 80, left hemisphere 101.8
1892 Male, age 76, both hemispheres 77.4
2437 Female, age 94, left hemisphere 69.7
1940 Female, age 85, left hemisphere 57.0
2113 Female, age 91, right hemisphere 45.7
2249 Male, age 74, both hemispheres 40.2
Hippocampus, CA3
nTPM: 60.5
2137 Male, age 80, left hemisphere 95.8
1867 Male, age 76, both hemispheres 65.5
2861 Female, age 67, both hemispheres 65.3
2620 Female, age 94, left hemisphere 60.9
1891 Female, age 85, both hemispheres 45.2
2436 Male, age 74, both hemispheres 30.1
Parahippocampal cortex
nTPM: 50.0
2532 Female, age 72, left hemisphere 65.1
2245 Female, age 91, both hemispheres 59.3
2018 Male, age 76, both hemispheres 54.0
2692 Male, age 74, both hemispheres 51.0
1850 Male, age 80, both hemispheres 49.4
2622 Female, age 67, right hemisphere 46.7
1933 Female, age 85, both hemispheres 46.5
1990 Female, age 91, right hemisphere 45.5
2693 Female, age 94, both hemispheres 42.1
2250 Female, age 67, right hemisphere 40.3
Perirhinal gyrus
nTPM: 49.1
1794 Male, age 80, right hemisphere 56.8
1847 Female, age 91, left hemisphere 54.7
2521 Female, age 94, right hemisphere 51.5
1841 Female, age 85, right hemisphere 45.1
2848 Male, age 76, right hemisphere 37.4
Subiculum
nTPM: 51.0
1901 Male, age 80, both hemispheres 75.1
2042 Male, age 76, both hemispheres 62.0
1977 Female, age 85, both hemispheres 52.8
2438 Female, age 94, left hemisphere 40.0
2619 Male, age 74, both hemispheres 38.7
2729 Female, age 91, right hemisphere 37.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 133.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.1
Samples: 197

Max nTPM: 262.5
Min nTPM: 23.7
Std nTPM: 45.2
Median nTPM: 130.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 262.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 261.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 258.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 249.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 240.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 231.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 231.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 229.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 223.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 221.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 217.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 126.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 126.4
FF:10169-103B7 60 years, female 130.8
FF:10153-102I9 76 years, female 122.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 82.3
Pig sample Sample description nTPM
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 88.6
Min nTPM: 24.5
Sample A Female 88.6
Sample B Female 38.8
Sample C Male 34.2
Sample D Male 24.5
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 60.5
Min nTPM: 27.7
Sample A Female 60.5
Sample B Female 43.1
Sample C Male 60.0
Sample D Male 27.7
Entorhinal cortex
nTPM: 82.3
Samples: 4

Max nTPM: 94.9
Min nTPM: 62.8
Sample A Female 82.7
Sample B Female 88.6
Sample C Male 94.9
Sample D Male 62.8
Ventral hippocampus
nTPM: 39.4
Samples: 4

Max nTPM: 48.5
Min nTPM: 31.4
Sample A Female 31.4
Sample B Female 34.5
Sample C Male 43.1
Sample D Male 48.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 35.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.0
Samples: 4

Max nTPM: 40.7
Min nTPM: 31.4
Sample A Male 31.4
Sample B Male 33.1
Sample C Female 34.9
Sample D Female 40.7
Hippocampal formation
nTPM: 29.1
Samples: 4

Max nTPM: 31.9
Min nTPM: 26.7
Sample A Male 27.4
Sample B Male 30.4
Sample C Female 26.7
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69449026 Antisense, RP_050419_03_B04, Mouse strain C57BL/6J (56 days, male) 0.3

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