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KCTD13
HPA
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  • KCTD13
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KCTD13
Synonyms FKSG86, PDIP1, POLDIP1
Gene descriptioni

Full gene name according to HGNC.

Potassium channel tetramerization domain containing 13
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p11.2
Chromosome location (bp) 29905012 - 29926236
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000174943 (version 109)
Entrez gene 253980
HGNC HGNC:22234
UniProt Q8WZ19 (UniProt - Evidence at protein level)
neXtProt NX_Q8WZ19
GeneCards KCTD13
Antibodypedia KCTD13 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex required for synaptic transmission 1. The BCR(KCTD13) E3 ubiquitin ligase complex mediates the ubiquitination of RHOA, leading to its degradation by the proteasome 2 Degradation of RHOA regulates the actin cytoskeleton and promotes synaptic transmission (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ubl conjugation pathway
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables identical protein binding activity and small GTPase binding activity. Contributes to ubiquitin-protein transferase activity. Involved in several processes, including cellular protein metabolic process; negative regulation of Rho protein signal transduction; and stress fiber assembly. Located in nuclear body. Part of Cul3-RING ubiquitin ligase complex. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
KCTD13-202
ENSP00000458486
ENST00000561540
I3L108
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0051260 [protein homooligomerization]
Show all
209 aa
22.3 kDa
No 0
KCTD13-205
ENSP00000460526
ENST00000566413
I3L3K4
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
81 aa
9 kDa
No 0
KCTD13-207
ENSP00000497126
ENST00000567795
A0A3B3IS45
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005515 [protein binding]
GO:0051260 [protein homooligomerization]
Show all
173 aa
18.4 kDa
No 0
KCTD13-208
ENSP00000455785
ENST00000568000
Q8WZ19
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0004842 [ubiquitin-protein transferase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0016477 [cell migration]
GO:0016567 [protein ubiquitination]
GO:0016604 [nuclear body]
GO:0019904 [protein domain specific binding]
GO:0031267 [small GTPase binding]
GO:0031463 [Cul3-RING ubiquitin ligase complex]
GO:0035024 [negative regulation of Rho protein signal transduction]
GO:0042802 [identical protein binding]
GO:0043149 [stress fiber assembly]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
GO:0045740 [positive regulation of DNA replication]
GO:0050806 [positive regulation of synaptic transmission]
GO:0051260 [protein homooligomerization]
Show all
329 aa
36.4 kDa
No 0
KCTD13-210
ENSP00000454282
ENST00000568995
H3BM90
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
140 aa
15.9 kDa
No 0
KCTD13-211
ENSP00000497049
ENST00000648037
A0A3B3IS35
[Direct mapping] BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
100 aa
10.2 kDa
No 0

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