We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
DDIT3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • DDIT3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:68.5 nTPM
HPA Brain:52.4 nTPM
GTEx:68.5 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Pig:37.9 nTPM
Mouse:58.2 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068416
Glial cells Medium
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.6
2481 Female, age 94, left hemisphere 90.3
1781 Male, age 74, unknown 66.8
2289 Male, age 61, right hemisphere 58.1
1857 Female, age 85, left hemisphere 42.3
2846 Female, age 79, unknown 39.5
2290 Female, age 72, unknown 38.0
1854 Male, age 80, left hemisphere 37.9
2288 Male, age 75, left hemisphere 31.6
Globus pallidus, externus
nTPM: 50.5
2567 Female, age 72, unknown 55.7
2772 Female, age 79, unknown 54.1
1996 Male, age 80, right hemisphere 48.9
2395 Male, age 75, both hemispheres 48.8
2646 Male, age 61, right hemisphere 44.8
Globus pallidus, internus
nTPM: 52.4
2287 Male, age 75, right hemisphere 65.0
2483 Female, age 94, right hemisphere 64.0
2566 Female, age 72, unknown 52.0
2778 Female, age 91, both hemispheres 50.9
1818 Male, age 74, unknown 48.4
2037 Male, age 80, right hemisphere 45.0
2111 Female, age 85, right hemisphere 41.4
Nucleus accumbens
nTPM: 41.0
2391 Female, age 94, left hemisphere 61.9
1806 Female, age 85, left hemisphere 44.7
2698 Female, age 72, unknown 44.4
1783 Male, age 74, unknown 41.6
2824 Male, age 61, right hemisphere 37.1
2286 Male, age 75, left hemisphere 34.4
1856 Female, age 91, right hemisphere 32.7
2732 Male, age 80, right hemisphere 31.0
Nucleus basalis of Meynert
nTPM: 37.6
2569 Male, age 61, both hemispheres 43.1
2821 Male, age 75, both hemispheres 36.7
2393 Male, age 80, right hemisphere 36.1
2484 Female, age 94, left hemisphere 34.3
Nucleus of the diagonal band
nTPM: 27.2
1812 Female, age 91, both hemispheres 38.0
1979 Male, age 74, unknown 30.3
2775 Male, age 80, right hemisphere 26.0
2195 Female, age 85, both hemispheres 22.4
2029 Male, age 61, right hemisphere 19.5
Putamen
nTPM: 41.2
2482 Female, age 94, left hemisphere 63.5
2489 Female, age 72, unknown 41.7
2466 Female, age 79, unknown 40.4
1937 Female, age 91, right hemisphere 38.4
1829 Male, age 74, unknown 37.9
1838 Male, age 80, right hemisphere 34.0
2647 Male, age 75, left hemisphere 32.5
Septal nuclei
nTPM: 29.8
2629 Female, age 94, right hemisphere 35.8
2199 Male, age 80, right hemisphere 33.8
2394 Male, age 61, left hemisphere 31.9
2009 Female, age 91, both hemispheres 30.7
2031 Female, age 72, unknown 27.0
1960 Male, age 74, unknown 25.4
2059 Female, age 85, both hemispheres 24.1
Stria terminalis, bed nucleus
nTPM: 31.9
2486 Female, age 94, both hemispheres 38.7
2201 Male, age 74, unknown 28.7
1974 Female, age 91, both hemispheres 28.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 62.6
Samples: 246

Max nTPM: 400.0
Min nTPM: 28.3
Std nTPM: 34.5
Median nTPM: 54.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 400.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 235.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 214.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 190.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 168.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 149.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 141.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 137.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 133.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 132.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 129.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 125.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 118.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 116.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 101.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 100.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 94.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 94.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 94.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 93.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 90.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 89.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 88.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 87.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 86.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 85.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 84.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 83.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 82.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 80.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 78.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 78.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 78.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 75.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 75.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 74.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 74.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 72.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 72.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 71.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 71.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 71.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 70.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 69.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 69.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 68.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 68.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 67.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 65.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 65.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 64.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 64.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 63.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 63.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 63.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 63.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 62.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 62.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 62.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 61.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 61.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 60.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 60.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 60.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 60.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 60.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 59.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 59.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 59.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 58.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 58.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 58.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 58.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 58.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 57.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 56.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 56.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 56.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 56.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 55.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 55.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 55.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 54.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 54.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 54.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 54.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 54.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 54.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 54.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 54.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 53.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 53.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 53.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 53.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 53.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 53.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 52.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 52.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 52.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 51.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 51.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 51.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 50.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 50.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 50.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 50.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 50.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 49.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 49.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 48.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 48.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 48.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 48.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 48.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 47.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 47.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 47.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 47.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 46.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 46.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 46.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 45.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 44.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 44.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 44.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 44.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 43.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 43.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 43.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 43.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 43.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 42.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 42.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 42.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 41.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 41.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 41.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 41.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 41.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 40.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 38.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 38.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 38.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 37.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 36.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 35.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 33.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 28.3
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 64.1
Samples: 246

Max nTPM: 518.7
Min nTPM: 31.8
Std nTPM: 40.5
Median nTPM: 54.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 518.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 215.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 213.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 190.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 174.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 171.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 167.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 153.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 140.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 138.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 126.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 125.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 123.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 119.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 115.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 115.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 110.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 108.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 101.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 100.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 99.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 96.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 92.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 88.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 88.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 86.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 85.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 85.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 84.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 83.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 83.2
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 80.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 79.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 78.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 78.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 78.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 77.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 76.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 76.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 75.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 74.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 74.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 73.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 73.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 73.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 73.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 72.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 72.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 71.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 71.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 70.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 68.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 66.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 66.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 65.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 65.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 65.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 65.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 65.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 64.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 64.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 64.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 64.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 64.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 63.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 63.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 63.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 63.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 63.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 63.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 63.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 62.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 62.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 61.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 61.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 61.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 61.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 61.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 60.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 60.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 60.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 60.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 60.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 60.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 59.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 59.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 57.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 57.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 57.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 57.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 57.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 56.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 56.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 56.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 56.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 56.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 56.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 56.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 55.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 55.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 55.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 55.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 55.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 55.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 55.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 54.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 54.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 54.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 54.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 53.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 53.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 53.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 53.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 53.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 53.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 53.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 53.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 52.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 52.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 52.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 51.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 51.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 51.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 51.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 51.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 51.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 51.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 51.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 51.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 51.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 51.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 50.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 50.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 50.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 50.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 50.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 50.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 50.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 49.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 49.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 49.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 49.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 49.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 49.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 49.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 48.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 48.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 48.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 48.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 48.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 48.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 47.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 47.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 47.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 47.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 47.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 47.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 47.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 46.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 46.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 46.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 46.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 46.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 45.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 45.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 45.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 45.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 45.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 44.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 44.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 44.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 44.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 44.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 44.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 44.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 43.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 43.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 43.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 43.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 43.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 43.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 42.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 42.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 42.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 42.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 42.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 41.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 41.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 41.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 41.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 40.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 39.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 39.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 39.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 38.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 38.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 38.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 37.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 35.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 35.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 35.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 35.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 35.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 33.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 33.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 32.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 32.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 31.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 68.5
Samples: 205

Max nTPM: 537.4
Min nTPM: 32.9
Std nTPM: 44.1
Median nTPM: 58.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 537.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 269.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 204.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 194.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 169.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 163.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 153.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 146.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 145.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 142.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 123.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 112.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 110.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 107.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 101.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 100.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 99.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 98.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 97.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 93.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 93.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 93.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 93.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 91.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 91.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 90.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 85.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 85.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 84.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 84.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 83.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 83.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 83.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 82.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 81.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 80.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 80.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 78.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 76.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 75.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 75.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 73.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 73.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 73.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 72.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 72.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 71.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 71.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 71.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 70.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 69.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 69.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 69.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 68.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 68.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 68.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 67.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 67.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 66.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 66.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 66.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 65.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 65.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 65.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 65.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 64.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 63.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 63.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 63.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 63.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 62.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 62.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 62.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 62.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 62.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 62.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 61.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 61.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 61.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 61.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 60.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 60.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 59.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 59.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 59.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 58.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 58.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 58.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 58.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 58.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 58.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 58.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 57.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 57.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 57.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 56.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 56.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 56.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 56.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 55.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 55.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 55.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 55.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 55.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 55.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 55.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 54.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 54.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 54.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 53.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 53.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 53.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 52.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 52.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 52.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 52.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 51.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 51.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 51.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 51.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 51.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 51.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 51.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 51.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 50.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 50.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 50.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 50.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 50.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 50.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 49.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 49.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 49.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 48.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 48.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 48.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 48.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 48.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 47.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 47.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 46.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 46.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 45.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 45.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 45.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 44.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 44.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 43.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 43.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 43.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 41.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 41.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 41.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 41.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 40.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 39.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 37.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 70.9
FF:10164-103B2 76 years, female 70.9
Nucleus accumbens
Scaled Tags Per Million: 35.8
FF:10037-101F1 23-56 years, mixed 35.8
Putamen
Scaled Tags Per Million: 41.7
FF:10176-103C5 60 years, female 41.7
Globus pallidus
Scaled Tags Per Million: 51.3
FF:10161-103A8 76 years, female 72.1
FF:10175-103C4 60 years, female 30.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.9
Pig sample Sample description nTPM
Caudate
nTPM: 26.1
Samples: 4

Max nTPM: 27.5
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 27.5
Sample C Male 27.2
Sample D Male 26.4
Putamen
nTPM: 29.7
Samples: 4

Max nTPM: 35.2
Min nTPM: 24.3
Sample A Female 32.0
Sample B Female 24.3
Sample C Male 35.2
Sample D Male 27.2
Septum
nTPM: 37.9
Samples: 4

Max nTPM: 45.5
Min nTPM: 32.7
Sample A Female 35.6
Sample B Female 32.7
Sample C Male 45.5
Sample D Male 37.6
Ventral pallidum
nTPM: 30.1
Samples: 4

Max nTPM: 33.5
Min nTPM: 26.5
Sample A Female 27.0
Sample B Female 33.5
Sample C Male 33.4
Sample D Male 26.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 58.2
Samples: 4

Max nTPM: 59.2
Min nTPM: 55.7
Sample A Male 55.7
Sample B Male 58.8
Sample C Female 59.2
Sample D Female 58.9
Septum
nTPM: 43.8
Samples: 4

Max nTPM: 46.6
Min nTPM: 42.4
Sample A Male 43.5
Sample B Male 42.7
Sample C Female 42.4
Sample D Female 46.6
Ventral forebrain
nTPM: 54.6
Samples: 4

Max nTPM: 58.8
Min nTPM: 49.9
Sample A Male 55.3
Sample B Male 49.9
Sample C Female 58.8
Sample D Female 54.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
564779 Antisense, RP_040826_01_F06, Mouse strain C57BL/6J (56 days, male) 6.3
Pallidum
Expression energy: 5.0
564779 Antisense, RP_040826_01_F06, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org