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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:46.8 nTPM
HPA Brain:126.4 nTPM
GTEx:46.8 nTPM
FANTOM5:124.1 Scaled Tags Per Million
Pig:58.8 nTPM
Mouse:52.8 nTPM
Allen mouse:2.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA052607
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 88.9
2289 Male, age 61, right hemisphere 97.7
2846 Female, age 79, unknown 93.9
2290 Female, age 72, unknown 91.2
1781 Male, age 74, unknown 90.6
1854 Male, age 80, left hemisphere 90.3
2481 Female, age 94, left hemisphere 85.9
1857 Female, age 85, left hemisphere 83.0
2288 Male, age 75, left hemisphere 79.0
Globus pallidus, externus
nTPM: 126.4
2567 Female, age 72, unknown 150.1
2646 Male, age 61, right hemisphere 132.6
1996 Male, age 80, right hemisphere 128.1
2772 Female, age 79, unknown 116.6
2395 Male, age 75, both hemispheres 104.4
Globus pallidus, internus
nTPM: 123.5
2111 Female, age 85, right hemisphere 146.8
2566 Female, age 72, unknown 136.2
1818 Male, age 74, unknown 129.2
2037 Male, age 80, right hemisphere 123.3
2778 Female, age 91, both hemispheres 121.2
2483 Female, age 94, right hemisphere 107.2
2287 Male, age 75, right hemisphere 100.5
Nucleus accumbens
nTPM: 91.7
2391 Female, age 94, left hemisphere 106.7
2732 Male, age 80, right hemisphere 99.9
1783 Male, age 74, unknown 97.8
2698 Female, age 72, unknown 96.6
1806 Female, age 85, left hemisphere 89.5
2824 Male, age 61, right hemisphere 87.1
2286 Male, age 75, left hemisphere 84.0
1856 Female, age 91, right hemisphere 71.9
Nucleus basalis of Meynert
nTPM: 102.5
2569 Male, age 61, both hemispheres 137.7
2393 Male, age 80, right hemisphere 95.6
2484 Female, age 94, left hemisphere 91.2
2821 Male, age 75, both hemispheres 85.6
Nucleus of the diagonal band
nTPM: 70.2
1979 Male, age 74, unknown 75.5
2195 Female, age 85, both hemispheres 73.0
2029 Male, age 61, right hemisphere 70.7
1812 Female, age 91, both hemispheres 66.8
2775 Male, age 80, right hemisphere 64.9
Putamen
nTPM: 99.7
2489 Female, age 72, unknown 118.3
1829 Male, age 74, unknown 115.0
2647 Male, age 75, left hemisphere 106.4
2482 Female, age 94, left hemisphere 99.4
2466 Female, age 79, unknown 99.1
1937 Female, age 91, right hemisphere 83.5
1838 Male, age 80, right hemisphere 76.0
Septal nuclei
nTPM: 82.2
2394 Male, age 61, left hemisphere 106.3
2199 Male, age 80, right hemisphere 96.9
2059 Female, age 85, both hemispheres 92.1
2031 Female, age 72, unknown 73.1
1960 Male, age 74, unknown 69.9
2629 Female, age 94, right hemisphere 68.6
2009 Female, age 91, both hemispheres 68.3
Stria terminalis, bed nucleus
nTPM: 70.5
2201 Male, age 74, unknown 74.3
2486 Female, age 94, both hemispheres 69.1
1974 Female, age 91, both hemispheres 68.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 45.6
Samples: 246

Max nTPM: 80.8
Min nTPM: 20.4
Std nTPM: 11.5
Median nTPM: 43.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 80.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 76.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 75.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 75.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 73.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 72.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 69.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 67.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 65.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 65.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 65.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 64.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 64.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 63.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 62.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 62.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 61.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 60.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 59.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 59.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 59.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 58.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 58.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 57.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 57.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 57.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 56.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 56.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 55.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 55.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 54.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 54.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 54.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 54.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 54.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 54.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 53.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 53.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 53.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 53.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 52.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 52.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 52.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 52.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 51.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 51.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 51.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 51.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 50.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 50.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 50.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 50.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 49.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 49.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 49.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 49.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 49.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 49.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 49.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 48.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 48.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 48.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 48.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 48.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 48.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 47.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 47.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 46.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 46.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 46.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 46.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 46.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 45.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 45.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 45.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 45.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 44.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 44.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 44.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 44.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 44.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 44.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 44.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 44.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 43.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 43.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 43.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 43.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 43.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 43.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 43.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 42.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 42.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 42.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 42.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 42.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 42.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 42.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 42.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 42.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 42.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 41.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 41.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 41.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 40.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 40.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 40.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 40.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 40.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 40.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 40.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 40.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 40.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 39.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 39.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 39.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 39.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 39.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 39.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 39.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 38.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 38.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 38.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 38.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 38.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 37.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 37.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 37.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 37.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 37.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 37.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 37.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 37.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 36.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 36.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 35.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 35.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 35.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 35.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 35.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 34.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 34.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 34.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 34.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 34.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 34.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 34.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 34.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 33.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 33.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 33.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 33.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 33.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 33.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 33.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 33.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 32.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 32.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 31.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 31.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 31.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 31.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 30.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 30.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 29.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 29.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 29.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 29.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 28.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 28.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 27.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 27.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 27.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 27.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 27.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 26.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 26.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 26.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 24.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 24.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 20.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 40.9
Samples: 246

Max nTPM: 76.5
Min nTPM: 20.8
Std nTPM: 10.2
Median nTPM: 38.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 76.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 75.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 74.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 73.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 70.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 69.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 68.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 66.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 63.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 62.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 62.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 61.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 60.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 60.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 60.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 60.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 60.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 59.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 58.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 57.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 56.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 56.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 55.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 54.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 54.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 53.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 53.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 53.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 52.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 51.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 51.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 50.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 50.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 50.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 50.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 50.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 49.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 49.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 49.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 49.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 49.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 48.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 48.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 48.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 47.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 47.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 47.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 46.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 46.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 46.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 46.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 46.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 46.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 46.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 45.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 44.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 44.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 44.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 44.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 44.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 44.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 43.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 43.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 43.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 43.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 43.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 43.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 43.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 43.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 42.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 42.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 42.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 42.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 41.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 41.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 41.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 41.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 41.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 41.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 41.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 40.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 40.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 40.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 40.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 40.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 40.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 40.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 40.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 40.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 40.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 40.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 40.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 40.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 40.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 40.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 39.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 39.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 39.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 39.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 39.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 39.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 39.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 38.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 38.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 38.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 38.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 38.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 38.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 38.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 38.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 38.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 38.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 38.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 38.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 38.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 38.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 38.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 38.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 38.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 38.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 37.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 37.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 37.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 37.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 37.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 37.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 37.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 37.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 37.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 37.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 37.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 37.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 37.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 37.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 36.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 36.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 36.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 36.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 36.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 35.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 35.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 35.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 35.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 35.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 35.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 35.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 35.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 35.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 35.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 35.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 35.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 34.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 34.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 34.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 34.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 34.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 34.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 34.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 34.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 33.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 33.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 33.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 33.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 33.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 33.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 33.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 33.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 33.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 33.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 33.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 33.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 33.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 33.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 33.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 33.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 33.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 32.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 32.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 32.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 32.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 32.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 32.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 32.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 32.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 31.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 31.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 31.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 31.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 31.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 31.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 30.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 30.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 30.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 30.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 30.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 30.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 30.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 30.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 30.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 30.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 30.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 30.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 29.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 29.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 28.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 28.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 28.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 28.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 28.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 28.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 28.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 27.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 27.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 27.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 27.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 26.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 26.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 26.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 25.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 25.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 25.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.8
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Brain - Putamen (basal ganglia)
Average nTPM: 46.8
Samples: 205

Max nTPM: 86.7
Min nTPM: 25.4
Std nTPM: 11.3
Median nTPM: 44.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 86.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 81.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 76.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 75.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 72.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 72.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 70.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 68.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 68.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 67.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 67.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 65.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 65.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 63.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 63.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 63.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 62.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 61.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 61.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 61.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 60.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 60.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 59.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 59.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 59.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 57.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 57.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 57.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 56.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 55.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 55.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 55.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 55.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 53.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 53.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 53.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 53.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 53.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 53.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 53.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 52.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 52.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 52.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 52.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 52.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 51.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 50.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 50.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 50.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 50.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 50.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 49.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 48.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 48.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 48.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 48.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 48.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 48.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 47.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 47.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 47.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 47.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 47.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 47.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 47.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 46.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 46.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 46.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 46.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 45.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 45.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 45.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 45.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 45.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 45.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 44.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 44.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 44.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 44.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 44.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 44.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 43.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 43.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 43.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 43.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 43.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 43.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 43.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 43.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 42.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 42.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 42.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 42.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 42.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 42.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 42.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 41.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 41.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 41.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 41.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 41.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 41.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 41.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 40.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 40.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 40.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 40.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 40.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 40.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 39.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 39.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 39.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 39.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 38.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 38.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 38.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 38.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 38.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 37.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 37.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 37.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 36.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 36.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 36.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 36.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 36.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 36.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 36.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 35.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 35.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 35.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 35.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 35.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 34.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 34.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 34.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 34.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 34.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 33.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 33.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 33.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 32.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 32.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 32.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 32.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 31.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 31.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 31.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 31.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 30.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 30.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 30.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 30.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 30.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 29.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 29.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 28.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 27.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 27.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 25.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

124.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 124.1
FF:10164-103B2 76 years, female 124.1
Nucleus accumbens
Scaled Tags Per Million: 83.8
FF:10037-101F1 23-56 years, mixed 83.8
Putamen
Scaled Tags Per Million: 81.7
FF:10176-103C5 60 years, female 81.7
Globus pallidus
Scaled Tags Per Million: 101.1
FF:10161-103A8 76 years, female 153.6
FF:10175-103C4 60 years, female 48.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.8
Pig sample Sample description nTPM
Caudate
nTPM: 52.5
Samples: 4

Max nTPM: 55.6
Min nTPM: 47.4
Sample A Female 47.4
Sample B Female 55.6
Sample C Male 54.8
Sample D Male 52.2
Putamen
nTPM: 58.8
Samples: 4

Max nTPM: 68.6
Min nTPM: 49.3
Sample A Female 68.6
Sample B Female 49.3
Sample C Male 53.7
Sample D Male 63.5
Septum
nTPM: 56.3
Samples: 4

Max nTPM: 58.1
Min nTPM: 54.0
Sample A Female 58.1
Sample B Female 56.1
Sample C Male 54.0
Sample D Male 56.8
Ventral pallidum
nTPM: 57.2
Samples: 4

Max nTPM: 64.5
Min nTPM: 45.8
Sample A Female 45.8
Sample B Female 55.6
Sample C Male 64.5
Sample D Male 62.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 52.9
Samples: 4

Max nTPM: 56.5
Min nTPM: 50.5
Sample A Male 53.2
Sample B Male 56.5
Sample C Female 50.5
Sample D Female 51.2
Septum
nTPM: 35.1
Samples: 4

Max nTPM: 38.6
Min nTPM: 32.3
Sample A Male 35.7
Sample B Male 33.9
Sample C Female 32.3
Sample D Female 38.6
Ventral forebrain
nTPM: 39.5
Samples: 4

Max nTPM: 42.6
Min nTPM: 35.6
Sample A Male 42.6
Sample B Male 39.1
Sample C Female 35.6
Sample D Female 40.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.8
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 2.8
Pallidum
Expression energy: 1.7
68498986 Antisense, RP_050113_02_G04, Mouse strain C57BL/6J (56 days, male) 1.7

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