PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		44.675
Mouse brain, Intensity
Ponsi 		70.460
RNA expressioni
HPA Brain:80.9 nTPM
FANTOM5:72.2 Scaled Tags Per Million
Pig:42.3 nTPM
Mouse:22.8 nTPM
Allen mouse:0.7 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA004689
Medulla oblongata mean intensity 44.675
intensityi
FRONT BACK
Nucleus of the solitary tract 13.466
Raphe magnus nucleus 9.791
Cochlear nucleus 19.227
Lateral paragigantocellular nucleus 34.133
Raphe pallidus nucleus 44.675
Facial nucleus 16.682
Hypoglossal nucleus -
Ambiguus nucleus 13.239
External cuneate nucleus -
Inferior olivary nucleus 27.814
Raphe obscures nucleus 8.279
Dorsal motor nucleus of vagus -
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 35.257
Parabrachial nucleus 55.424
Principle sensory trigeminal nucleus 22.857
Locus coeruleus 70.460
Pontine nucleus 35.893
Vestibular nucleus 26.339
Pontine reticular nucleus, oral 5.243
Lateral lemniscus 22.852
Superior paraolivary nucleus -

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 80.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 50.7
2090 Male, age 80, both hemispheres 60.9
2301 Female, age 85, both hemispheres 54.2
2188 Female, age 91, both hemispheres 52.9
1984 Male, age 76, both hemispheres 34.9
Area postrema
nTPM: 80.9
2799 Male, age 61, both hemispheres 100.4
2306 Male, age 80, both hemispheres 78.4
2054 Male, age 76, both hemispheres 63.8
Dorsal cochlear nucleus
nTPM: 59.3
2378 Male, age 80, both hemispheres 63.7
2802 Male, age 74, right hemisphere 62.4
2058 Male, age 76, both hemispheres 60.4
2370 Male, age 61, both hemispheres 57.2
2187 Female, age 91, both hemispheres 52.7
Dorsal medullary reticular nucleus
nTPM: 59.5
2088 Male, age 76, both hemispheres 64.1
2373 Male, age 61, both hemispheres 62.0
2040 Female, age 85, both hemispheres 52.3
Dorsal motor vagal complex
nTPM: 64.1
2643 Male, age 74, both hemispheres 78.5
2797 Male, age 61, both hemispheres 70.8
2185 Male, age 76, both hemispheres 70.5
2807 Female, age 85, both hemispheres 64.9
2813 Female, age 72, unknown 59.4
2844 Male, age 55, unknown 59.3
2000 Male, age 74, unknown 55.6
2133 Female, age 91, both hemispheres 53.7
Dorsal tegmental nucleus
nTPM: 60.1
2358 Male, age 61, both hemispheres 78.8
2083 Male, age 80, both hemispheres 60.2
2326 Male, age 74, both hemispheres 54.6
1936 Male, age 76, left hemisphere 46.8
Dorsolateral tegmental area
nTPM: 54.9
2337 Male, age 61, both hemispheres 67.3
2654 Male, age 80, both hemispheres 58.5
2751 Female, age 85, both hemispheres 56.2
2141 Male, age 76, both hemispheres 47.7
2360 Male, age 74, both hemispheres 44.8
Gigantocellular reticular nuclei, medullary
nTPM: 53.5
2314 Male, age 61, both hemispheres 61.2
2387 Female, age 91, both hemispheres 57.3
2022 Male, age 76, right hemisphere 55.3
1876 Female, age 85, both hemispheres 52.6
2310 Male, age 80, both hemispheres 52.0
2462 Male, age 74, both hemispheres 42.9
Gigantocellular reticular nuclei, pars
nTPM: 50.9
2706 Male, age 80, both hemispheres 57.3
2330 Male, age 80, both hemispheres 54.5
2336 Male, age 61, both hemispheres 54.4
2084 Female, age 85, both hemispheres 49.9
2168 Male, age 76, both hemispheres 38.6
Inferior olive
nTPM: 61.4
2178 Male, age 61, both hemispheres 70.3
2379 Male, age 80, both hemispheres 66.1
2628 Female, age 91, both hemispheres 63.6
2085 Female, age 85, both hemispheres 54.8
2563 Male, age 74, both hemispheres 52.2
Kolliker-Fuse nucleus
nTPM: 54.2
2793 Female, age 91, left hemisphere 60.7
2315 Male, age 76, right hemisphere 51.2
2163 Male, age 80, both hemispheres 50.6
Lateral lemniscal nuclei
nTPM: 46.4
2320 Female, age 91, left hemisphere 54.6
2036 Male, age 80, both hemispheres 50.2
2746 Female, age 85, left hemisphere 45.4
2453 Male, age 74, right hemisphere 43.8
2169 Male, age 76, both hemispheres 38.2
Lateral medullary reticular nucleus
nTPM: 61.8
2852 Male, age 80, both hemispheres 80.8
2374 Male, age 61, both hemispheres 65.9
2190 Female, age 85, both hemispheres 59.7
2044 Male, age 76, both hemispheres 56.0
2305 Male, age 74, both hemispheres 55.2
2804 Female, age 91, both hemispheres 53.2
Lateral parabrachial nucleus
nTPM: 54.8
2792 Male, age 76, both hemispheres 61.6
2013 Male, age 80, both hemispheres 58.6
2790 Male, age 61, both hemispheres 53.5
2139 Female, age 85, right hemisphere 45.3
Lateral vestibular nucleus
nTPM: 52.4
2311 Male, age 80, both hemispheres 54.7
2184 Male, age 76, both hemispheres 50.1
Locus coeruleus
nTPM: 48.4
1980 Male, age 76, both hemispheres 53.2
2317 Female, age 72, unknown 53.1
2720 Male, age 74, both hemispheres 52.5
2162 Male, age 80, both hemispheres 50.9
2014 Male, age 55, unknown 44.1
2788 Male, age 74, unknown 42.7
2123 Female, age 91, both hemispheres 42.6
Medial olivary nucleus
nTPM: 64.9
1943 Male, age 61, both hemispheres 71.9
2851 Male, age 80, both hemispheres 71.7
1962 Male, age 76, both hemispheres 60.8
2138 Female, age 91, both hemispheres 55.3
Medial parabrachial nucleus
nTPM: 52.2
2786 Male, age 76, both hemispheres 56.4
2854 Male, age 80, both hemispheres 52.5
2463 Female, age 85, right hemisphere 51.8
2170 Female, age 91, both hemispheres 50.7
2156 Male, age 61, both hemispheres 49.7
Medial periolivary nuclei
nTPM: 46.6
2081 Male, age 80, both hemispheres 55.0
2458 Female, age 91, both hemispheres 51.9
2791 Male, age 74, right hemisphere 48.5
2063 Male, age 76, both hemispheres 41.3
2171 Female, age 85, both hemispheres 36.2
Medial vestibular nucleus
nTPM: 51.1
2093 Male, age 80, both hemispheres 55.2
2624 Male, age 61, both hemispheres 54.7
2803 Female, age 91, both hemispheres 54.7
2801 Male, age 74, both hemispheres 51.4
2134 Male, age 76, both hemispheres 48.6
2743 Female, age 85, both hemispheres 42.3
Motor facial nucleus
nTPM: 48.6
2126 Male, age 61, both hemispheres 59.2
2795 Female, age 91, both hemispheres 52.0
2697 Female, age 85, both hemispheres 50.9
2365 Male, age 74, right hemisphere 48.6
2327 Male, age 80, both hemispheres 44.4
2062 Male, age 76, both hemispheres 36.4
Motor hypoglossal nucleus
nTPM: 58.9
2277 Male, age 76, both hemispheres 68.1
2182 Male, age 80, both hemispheres 66.5
2132 Female, age 85, both hemispheres 56.4
2125 Female, age 91, both hemispheres 55.4
2461 Male, age 61, both hemispheres 47.9
Motor trigeminal nucleus
nTPM: 51.6
2321 Female, age 91, both hemispheres 55.8
2560 Male, age 74, both hemispheres 55.7
2309 Male, age 76, both hemispheres 51.8
2335 Male, age 61, both hemispheres 51.3
2079 Male, age 80, both hemispheres 43.5
Nuclei of the trapezoid body
nTPM: 42.6
2166 Male, age 80, both hemispheres 53.2
2368 Female, age 91, both hemispheres 50.2
1983 Male, age 76, both hemispheres 37.9
2159 Male, age 61, both hemispheres 36.5
2735 Female, age 85, both hemispheres 35.1
Nucleus ambiguus
nTPM: 71.6
2071 Male, age 76, both hemispheres 72.8
2096 Female, age 85, both hemispheres 70.3
Nucleus cuneatus
nTPM: 64.4
2380 Male, age 80, both hemispheres 76.0
2805 Female, age 91, both hemispheres 72.1
2381 Male, age 80, both hemispheres 66.1
2808 Female, age 85, both hemispheres 64.9
2564 Male, age 74, both hemispheres 63.4
2100 Male, age 76, both hemispheres 62.5
2562 Male, age 61, both hemispheres 62.3
2376 Male, age 61, both hemispheres 57.6
2131 Male, age 76, both hemispheres 54.3
Nucleus gracilis
nTPM: 74.3
2382 Male, age 80, both hemispheres 81.8
2299 Female, age 85, both hemispheres 73.3
2627 Male, age 74, both hemispheres 67.8
Nucleus raphe magnus
nTPM: 41.6
2328 Male, age 80, both hemispheres 49.0
2459 Female, age 91, both hemispheres 49.0
2051 Male, age 76, both hemispheres 47.7
2455 Male, age 74, both hemispheres 41.1
2172 Female, age 85, both hemispheres 34.0
2160 Male, age 61, both hemispheres 28.4
Nucleus raphe obscurus
nTPM: 67.9
2142 Male, age 76, midline 78.5
2800 Male, age 61, midline 64.7
2845 Female, age 85, midline 60.6
Nucleus raphe pallidus
nTPM: 70.7
1924 Male, age 61, midline 87.8
2145 Male, age 76, midline 62.6
2183 Male, age 80, midline 61.6
Nucleus tractus solitarii
nTPM: 48.7
2656 Male, age 76, both hemispheres 61.5
2307 Male, age 80, both hemispheres 57.9
2191 Female, age 85, both hemispheres 46.5
2144 Female, age 91, right hemisphere 28.9
Paramedian reticular nucleus
nTPM: 49.6
2057 Male, age 80, both hemispheres 55.1
2052 Male, age 76, both hemispheres 52.4
2313 Male, age 61, both hemispheres 47.6
2050 Female, age 85, both hemispheres 43.3
Parvicellular reticular nuclei
nTPM: 51.5
2119 Male, age 80, both hemispheres 57.3
2095 Male, age 76, both hemispheres 50.4
2558 Male, age 74, both hemispheres 46.9
Parvicellular reticular nuclei, medullary
nTPM: 54.1
2181 Male, age 80, left hemisphere 55.4
2189 Female, age 91, both hemispheres 54.3
2091 Female, age 85, both hemispheres 52.6
Pedunculopontine tegmental nucleus
nTPM: 53.3
2338 Male, age 61, both hemispheres 55.3
2334 Male, age 80, both hemispheres 54.8
1921 Female, age 85, both hemispheres 50.0
Peritrigeminal nucleus
nTPM: 58.8
2067 Female, age 85, both hemispheres 64.1
2136 Male, age 76, both hemispheres 57.5
2179 Male, age 61, both hemispheres 54.7
Pontine nuclei
nTPM: 47.8
2319 Female, age 91, both hemispheres 57.7
2115 Male, age 80, left hemisphere 55.8
2454 Male, age 74, left hemisphere 55.7
2109 Female, age 72, unknown 50.0
1863 Male, age 55, unknown 45.5
1968 Male, age 76, left hemisphere 43.8
2787 Female, age 85, both hemispheres 42.1
2727 Male, age 61, right hemisphere 31.7
Pontine raphe nucleus
nTPM: 47.7
2853 Male, age 76, midline 55.2
2122 Female, age 85, midline 40.1
Posteroventral cochlear nucleus
nTPM: 55.9
2070 Male, age 76, both hemispheres 62.2
2135 Female, age 91, both hemispheres 61.0
2341 Male, age 80, both hemispheres 57.4
2371 Male, age 61, both hemispheres 55.9
2752 Female, age 85, both hemispheres 43.2
Prepositus hypoglossal nucleus
nTPM: 47.6
2086 Male, age 80, both hemispheres 50.1
2855 Female, age 85, right hemisphere 45.0
Principal sensory trigeminal nucleus
nTPM: 44.6
2324 Male, age 76, both hemispheres 51.9
2367 Female, age 91, left hemisphere 51.9
2008 Male, age 80, left hemisphere 39.2
2158 Male, age 61, both hemispheres 35.4
Reticular pontine nucleus, caudal
nTPM: 50.9
2559 Male, age 74, both hemispheres 60.1
2457 Female, age 91, both hemispheres 53.9
2092 Male, age 76, both hemispheres 48.1
2332 Male, age 80, right hemisphere 41.5
Reticular pontine nucleus, oral
nTPM: 54.9
1939 Male, age 80, both hemispheres 59.8
2366 Female, age 91, both hemispheres 59.2
2167 Male, age 76, both hemispheres 55.0
2361 Male, age 74, both hemispheres 52.2
2012 Female, age 85, both hemispheres 48.2
Reticulotegmental nucleus
nTPM: 50.5
2452 Male, age 74, both hemispheres 57.3
2333 Male, age 80, both hemispheres 52.6
2322 Female, age 91, both hemispheres 48.0
2325 Male, age 76, both hemispheres 44.0
Spinal trigeminal nucleus, caudal
nTPM: 59.7
2642 Male, age 74, both hemispheres 70.4
2308 Male, age 80, both hemispheres 68.1
2312 Male, age 61, both hemispheres 55.2
2447 Male, age 76, both hemispheres 53.4
2390 Female, age 91, both hemispheres 51.3
Spinal trigeminal nucleus, interpolar
nTPM: 50.3
2033 Male, age 80, both hemispheres 56.7
2386 Female, age 85, both hemispheres 53.8
2389 Female, age 91, both hemispheres 48.8
2066 Male, age 76, right hemisphere 48.0
2625 Male, age 61, both hemispheres 44.0
Spinal trigeminal nucleus, oral
nTPM: 50.2
1978 Male, age 76, both hemispheres 58.8
2164 Male, age 80, both hemispheres 52.6
2737 Female, age 85, both hemispheres 39.1
Spinal vestibular nucleus
nTPM: 58.7
2384 Male, age 74, both hemispheres 69.0
2748 Male, age 76, both hemispheres 65.1
2186 Female, age 91, both hemispheres 58.8
2780 Male, age 80, both hemispheres 56.3
2806 Female, age 85, both hemispheres 52.6
2796 Male, age 61, both hemispheres 50.6
Subcoeruleus area
nTPM: 53.5
2369 Female, age 85, left hemisphere 63.5
2451 Male, age 74, both hemispheres 63.3
2323 Female, age 91, left hemisphere 50.7
2089 Male, age 76, left hemisphere 45.8
1958 Male, age 80, both hemispheres 44.1
Superior olive
nTPM: 47.5
2561 Female, age 91, both hemispheres 51.7
2329 Male, age 80, right hemisphere 51.4
2020 Male, age 76, both hemispheres 48.5
2364 Male, age 74, right hemisphere 46.3
1875 Female, age 85, both hemispheres 39.7
Superior vestibular nucleus
nTPM: 48.6
2061 Male, age 76, both hemispheres 53.3
2015 Male, age 80, both hemispheres 51.0
2383 Male, age 74, both hemispheres 41.5
Ventral medullary reticular nucleus
nTPM: 69.2
2060 Male, age 76, both hemispheres 71.6
2372 Male, age 61, both hemispheres 66.9
Ventral periolivary nuclei
nTPM: 44.3
2023 Male, age 76, both hemispheres 47.6
2165 Male, age 80, both hemispheres 45.6
2794 Female, age 91, left hemisphere 45.3
2130 Female, age 85, both hemispheres 38.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 58.0
2118 Male, age 80, both hemispheres 69.9
2180 Male, age 61, both hemispheres 59.4
1986 Male, age 76, both hemispheres 56.4
2741 Female, age 85, both hemispheres 52.4
2302 Female, age 91, both hemispheres 52.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 51.5
2359 Male, age 61, both hemispheres 62.2
2456 Female, age 91, both hemispheres 57.6
2161 Male, age 80, both hemispheres 52.5
2840 Female, age 85, both hemispheres 48.4
1959 Male, age 76, both hemispheres 45.6
2449 Male, age 74, both hemispheres 42.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 72.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 57.4
FF:10165-103B3 76 years, female 60.6
FF:10182-103D2 60 years, female 54.1
Medulla oblongata
Scaled Tags Per Million: 71.9
FF:10038-101F2 18-64 years, mixed 98.2
FF:10155-103A2 76 years, female 66.4
FF:10174-103C3 60 years, female 51.0
Pons
Scaled Tags Per Million: 72.2
FF:10033-101E6 18-54 years, mixed 72.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 42.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 42.3
Samples: 4

Max nTPM: 52.9
Min nTPM: 34.7
Sample A Female 36.2
Sample B Female 34.7
Sample C Male 45.2
Sample D Male 52.9
Pons
nTPM: 38.0
Samples: 4

Max nTPM: 52.1
Min nTPM: 31.7
Sample A Female 52.1
Sample B Female 32.3
Sample C Male 31.7
Sample D Male 36.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 22.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 22.8
Samples: 4

Max nTPM: 23.3
Min nTPM: 22.1
Sample A Male 22.9
Sample B Male 23.3
Sample C Female 22.7
Sample D Female 22.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.7
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.7
Pons
Expression energy: 0.4
69526797 Antisense, RP_050421_01_F08, Mouse strain C57BL/6J (56 days, male) 0.4

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