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C1orf127
HPA
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  • C1orf127
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

C1orf127
Synonyms FLJ37118
Gene descriptioni

Full gene name according to HGNC.

Chromosome 1 open reading frame 127
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at transcript level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 1
Cytoband p36.22
Chromosome location (bp) 10946471 - 10982076
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000175262 (version 109)
Entrez gene 148345
HGNC HGNC:26730
UniProt
neXtProt
GeneCards C1orf127
Antibodypedia C1orf127 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to be involved in heart development. Predicted to act upstream of or within determination of left/right symmetry. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
C1orf127-201
ENSP00000366203
ENST00000377004
G8JLG8
[Direct mapping] Uncharacterized protein C1orf127
Show all
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Show all
823 aa
89 kDa
Yes 0
C1orf127-202
ENSP00000387816
ENST00000418570
H3BM07
[Direct mapping] Uncharacterized protein C1orf127
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
658 aa
69.9 kDa
No 0
C1orf127-203
ENSP00000467607
ENST00000468348
K7EPZ7
[Direct mapping] Uncharacterized protein C1orf127
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
69 aa
7.4 kDa
No 0
C1orf127-205
ENSP00000429704
ENST00000520253
H0YBK5
[Direct mapping] Uncharacterized protein C1orf127
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
775 aa
83.6 kDa
No 0

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