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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.4 nTPM
HPA Brain:60.9 nTPM
GTEx:61.4 nTPM
FANTOM5:98.9 Scaled Tags Per Million
Pig:27.4 nTPM
Mouse:145.3 nTPM
Allen mouse:0.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037784
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 50.9
2481 Female, age 94, left hemisphere 61.4
1857 Female, age 85, left hemisphere 57.4
1854 Male, age 80, left hemisphere 51.6
2290 Female, age 72, unknown 51.1
2846 Female, age 79, unknown 49.9
2288 Male, age 75, left hemisphere 49.3
2289 Male, age 61, right hemisphere 45.7
1781 Male, age 74, unknown 40.8
Globus pallidus, externus
nTPM: 60.9
1996 Male, age 80, right hemisphere 72.3
2646 Male, age 61, right hemisphere 62.9
2395 Male, age 75, both hemispheres 59.7
2772 Female, age 79, unknown 59.6
2567 Female, age 72, unknown 50.2
Globus pallidus, internus
nTPM: 60.5
2483 Female, age 94, right hemisphere 68.0
2037 Male, age 80, right hemisphere 65.9
1818 Male, age 74, unknown 62.9
2287 Male, age 75, right hemisphere 60.6
2111 Female, age 85, right hemisphere 59.6
2778 Female, age 91, both hemispheres 58.8
2566 Female, age 72, unknown 48.0
Nucleus accumbens
nTPM: 49.3
2286 Male, age 75, left hemisphere 55.2
1806 Female, age 85, left hemisphere 54.9
2698 Female, age 72, unknown 49.4
2391 Female, age 94, left hemisphere 49.2
2824 Male, age 61, right hemisphere 47.2
2732 Male, age 80, right hemisphere 46.6
1856 Female, age 91, right hemisphere 46.4
1783 Male, age 74, unknown 45.4
Nucleus basalis of Meynert
nTPM: 50.2
2569 Male, age 61, both hemispheres 65.7
2393 Male, age 80, right hemisphere 48.2
2484 Female, age 94, left hemisphere 45.4
2821 Male, age 75, both hemispheres 41.5
Nucleus of the diagonal band
nTPM: 42.6
1812 Female, age 91, both hemispheres 48.0
1979 Male, age 74, unknown 46.7
2775 Male, age 80, right hemisphere 42.0
2195 Female, age 85, both hemispheres 39.9
2029 Male, age 61, right hemisphere 36.4
Putamen
nTPM: 46.9
2482 Female, age 94, left hemisphere 51.6
1829 Male, age 74, unknown 47.7
2466 Female, age 79, unknown 47.6
1937 Female, age 91, right hemisphere 47.3
2647 Male, age 75, left hemisphere 46.5
1838 Male, age 80, right hemisphere 45.8
2489 Female, age 72, unknown 42.0
Septal nuclei
nTPM: 44.0
2199 Male, age 80, right hemisphere 52.9
2394 Male, age 61, left hemisphere 49.9
2031 Female, age 72, unknown 45.9
2059 Female, age 85, both hemispheres 42.1
2009 Female, age 91, both hemispheres 40.4
1960 Male, age 74, unknown 40.1
2629 Female, age 94, right hemisphere 37.0
Stria terminalis, bed nucleus
nTPM: 40.6
2201 Male, age 74, unknown 41.5
1974 Female, age 91, both hemispheres 40.6
2486 Female, age 94, both hemispheres 39.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 59.7
Samples: 246

Max nTPM: 98.2
Min nTPM: 37.3
Std nTPM: 12.2
Median nTPM: 57.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 98.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 94.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 93.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 91.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 89.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 88.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 87.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 86.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 85.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 85.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 84.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 84.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 84.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 83.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 82.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 81.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 80.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 80.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 79.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 78.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 78.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 78.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 77.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 76.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 75.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 75.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 73.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 72.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 72.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 72.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 72.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 72.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 71.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 71.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 71.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 71.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 71.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 70.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 70.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 70.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 69.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 69.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 68.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 68.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 67.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 67.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 67.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 67.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 66.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 66.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 66.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 65.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 65.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 65.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 65.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 65.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 65.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 64.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 64.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 64.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 64.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 64.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 64.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 64.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 63.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 63.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 62.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 62.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 62.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 62.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 62.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 61.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 60.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 60.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 60.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 60.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 60.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 59.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 59.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 59.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 59.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 58.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 58.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 58.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 58.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 57.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 57.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 57.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 57.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 57.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 57.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 57.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 56.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 56.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 56.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 56.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 56.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 56.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 55.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 55.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 55.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 55.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 55.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 55.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 55.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 55.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 55.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 54.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 54.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 54.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 54.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 54.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 54.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 53.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 53.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 53.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 53.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 52.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 52.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 52.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 52.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 52.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 52.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 52.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 52.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 51.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 51.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 51.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 51.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 51.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 50.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 50.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 50.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 50.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 50.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 49.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 49.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 49.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 49.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 48.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 48.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 47.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 47.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 47.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 47.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 46.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 46.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 46.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 46.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 45.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 45.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 45.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 44.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 44.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 44.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 43.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 43.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 39.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 39.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 39.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 37.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 59.8
Samples: 246

Max nTPM: 154.5
Min nTPM: 31.6
Std nTPM: 16.3
Median nTPM: 56.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 154.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 145.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 110.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 103.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 102.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 99.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 97.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 96.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 95.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 92.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 92.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 90.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 89.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 89.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 89.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 88.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 86.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 86.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 86.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 85.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 85.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 83.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 82.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 82.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 81.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 81.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 80.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 79.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 79.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 79.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 77.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 76.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 76.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 76.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 76.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 75.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 74.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 74.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 73.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 73.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 72.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 72.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 71.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 70.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 69.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 69.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 69.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 69.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 67.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 67.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 66.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 66.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 66.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 65.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 65.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 65.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 65.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 65.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 64.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 64.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 64.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 64.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 63.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 63.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 62.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 62.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 62.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 62.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 61.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 61.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 61.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 61.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 61.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 61.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 61.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 60.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 60.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 60.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 60.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 60.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 60.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 59.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 59.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 59.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 59.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 59.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 59.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 59.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 58.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 58.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 58.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 58.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 58.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 57.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 57.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 57.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 57.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 57.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 57.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 57.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 57.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 57.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 56.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 56.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 56.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 56.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 56.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 56.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 56.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 56.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 56.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 56.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 56.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 55.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 55.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 55.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 55.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 55.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 55.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 55.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 55.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 54.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 54.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 54.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 54.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 54.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 53.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 53.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 53.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 53.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 53.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 53.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 53.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 52.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 52.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 52.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 52.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 52.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 51.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 51.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 51.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 51.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 51.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 51.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 51.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 51.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 51.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 51.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 51.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 50.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 50.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 50.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 50.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 50.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 50.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 50.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 50.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 49.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 49.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 49.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 49.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 49.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 49.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 49.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 49.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 48.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 48.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 48.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 48.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 48.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 48.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 48.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 48.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 47.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 47.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 47.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 47.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 47.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 46.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 46.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 46.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 46.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 46.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 46.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 46.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 45.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 45.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 45.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 45.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 45.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 43.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 43.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 43.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 43.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 43.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 43.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 42.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 42.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 42.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 42.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 42.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 41.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 40.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 39.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 39.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 37.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 37.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 37.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.6
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Brain - Putamen (basal ganglia)
Average nTPM: 61.4
Samples: 205

Max nTPM: 121.5
Min nTPM: 38.1
Std nTPM: 13.5
Median nTPM: 59.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 121.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 99.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 98.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 96.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 95.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 94.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 94.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 94.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 93.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 89.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 87.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 85.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 84.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 83.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 81.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 81.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 81.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 81.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 77.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 77.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 76.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 76.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 75.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 75.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 75.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 75.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 74.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 73.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 73.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 73.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 72.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 72.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 72.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 72.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 72.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 72.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 71.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 71.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 71.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 70.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 70.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 69.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 69.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 67.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 67.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 67.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 67.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 66.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 66.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 66.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 66.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 66.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 66.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 65.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 65.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 65.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 65.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 64.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 63.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 62.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 62.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 62.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 62.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 62.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 62.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 62.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 62.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 61.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 61.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 61.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 61.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 61.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 60.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 60.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 60.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 60.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 60.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 60.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 59.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 59.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 59.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 59.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 58.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 58.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 58.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 58.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 58.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 58.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 57.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 57.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 57.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 57.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 57.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 57.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 56.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 55.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 55.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 55.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 55.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 55.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 55.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 54.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 54.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 54.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 54.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 54.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 53.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 53.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 53.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 53.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 53.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 53.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 53.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 53.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 53.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 52.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 52.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 52.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 52.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 51.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 51.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 51.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 51.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 51.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 51.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 51.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 51.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 50.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 50.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 50.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 49.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 49.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 49.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 49.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 49.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 49.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 49.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 49.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 49.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 48.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 48.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 48.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 48.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 48.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 47.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 46.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 46.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 45.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 44.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 44.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 44.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 43.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 43.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 43.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 42.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 41.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 41.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 41.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 40.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 39.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 39.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 38.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 38.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

98.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.6
FF:10164-103B2 76 years, female 74.6
Nucleus accumbens
Scaled Tags Per Million: 80.9
FF:10037-101F1 23-56 years, mixed 80.9
Putamen
Scaled Tags Per Million: 72.9
FF:10176-103C5 60 years, female 72.9
Globus pallidus
Scaled Tags Per Million: 98.9
FF:10175-103C4 60 years, female 123.2
FF:10161-103A8 76 years, female 74.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.4
Pig sample Sample description nTPM
Caudate
nTPM: 27.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 21.3
Sample A Female 21.3
Sample B Female 31.2
Sample C Male 30.7
Sample D Male 26.2
Putamen
nTPM: 27.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 23.4
Sample A Female 23.4
Sample B Female 29.5
Sample C Male 30.9
Sample D Male 25.5
Septum
nTPM: 24.8
Samples: 4

Max nTPM: 28.1
Min nTPM: 20.1
Sample A Female 27.6
Sample B Female 28.1
Sample C Male 23.5
Sample D Male 20.1
Ventral pallidum
nTPM: 24.9
Samples: 4

Max nTPM: 29.8
Min nTPM: 22.8
Sample A Female 23.7
Sample B Female 29.8
Sample C Male 22.8
Sample D Male 23.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 129.1
Samples: 4

Max nTPM: 135.5
Min nTPM: 120.9
Sample A Male 129.7
Sample B Male 120.9
Sample C Female 130.3
Sample D Female 135.5
Septum
nTPM: 145.3
Samples: 4

Max nTPM: 158.3
Min nTPM: 126.3
Sample A Male 126.3
Sample B Male 158.3
Sample C Female 151.7
Sample D Female 144.9
Ventral forebrain
nTPM: 122.9
Samples: 4

Max nTPM: 134.7
Min nTPM: 115.9
Sample A Male 115.9
Sample B Male 119.4
Sample C Female 134.7
Sample D Female 121.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.5
631723 Antisense, RP_040907_01_C02, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 0.5
631723 Antisense, RP_040907_01_C02, Mouse strain C57BL/6J (56 days, male) 0.5

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